CF835523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SC61A_CANGA (Protein transport protein SEC61 subunit alpha OS=Candida glabrata GN=SEC61 PE=3 SV=1) HSP 1 Score: 330.487 bits (846), Expect = 7.307e-90 Identity = 166/283 (58.66%), Postives = 208/283 (73.50%), Query Frame = 2 Query: 2 GYGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWK-ESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 GYGLGSGISLF AT I E+I WKAF+PTT+NSGRG EFEGAVIA FHLL +++K AL EAFYR+NLPN+ ++ATV VFL V+Y QGF+ LPV+S RGQ YPIKLFYTSN PI+LQSAL SN++ ISQ+L++KY N + L G W +G +P+ G++YY+ SL +P + Y F+L CALFSKTWIE+SG+SA+DVAKQ KEQ MV+ G R++++ KEL + IPTAAAFGG IGAL+V +D +GA+GSG ILLA T IY Sbjct: 173 GYGLGSGISLFTATNIAENIFWKAFAPTTVNSGRGKEFEGAVIAFFHLLAVRKDKKRALVEAFYRENLPNMFQVIATVFVFLFVLYLQGFRYELPVKSTKVRGQMAIYPIKLFYTSNTPIMLQSALSSNIFLISQILFQKYPSNPVIRLFGVWGIRPGTNGPQVPLSGISYYLQPIGSLKMALLDPIKTVIYTAFVLGTCALFSKTWIEISGTSAKDVAKQFKEQGMVINGKRETSVYKELKKIIPTAAAFGGATIGALSVGSDLLGALGSGASILLATTTIY 455
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SC61A_CANAL (Protein transport protein SEC61 subunit alpha OS=Candida albicans GN=SEC61 PE=3 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 1.246e-89 Identity = 160/282 (56.74%), Postives = 205/282 (72.70%), Query Frame = 2 Query: 2 GYGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 GYGLGSG+SLF AT CE + WKAF+PTT S +G EF+GAV+A+FHLL ++++K AL E+FYR NLPN+ LLAT+LVF VVY QGF++ LP++S RG G+YPI+LFYTSN+PI+L+SAL SN++ ISQLL+ ++ N FV LLG W S GGLAYY+ P + D +P Y+ F+L +CA+FS TWIE+SG+S RDVAKQ KEQ +V+ GHRD++ KEL + I AAAFGG IGAL+V+ D MG +GSGT ILLAVT IY Sbjct: 174 GYGLGSGVSLFTATNTCEQVFWKAFAPTTSTSAKGTEFDGAVVAMFHLLGSRKDKKRALIESFYRPNLPNMFQLLATLLVFFAVVYLQGFRIELPMKSTRQRGPYGSYPIRLFYTSNIPIMLESALASNIFIISQLLFMRWPNNLFVKLLGTWDARAGSSQLYANGGLAYYIQPPFNFTDALLDPIKTTIYIAFVLGSCAVFSTTWIEISGTSPRDVAKQFKEQGLVIAGHRDTSAYKELKKIIHIAAAFGGATIGALSVVCDLMGTLGSGTSILLAVTTIY 455
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SC61A_ASHGO (Protein transport protein SEC61 subunit alpha OS=Ashbya gossypii GN=SEC61 PE=3 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 4.736e-89 Identity = 163/285 (57.19%), Postives = 212/285 (74.39%), Query Frame = 2 Query: 2 GYGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKW---KESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 GYGLGSGISLF AT I E I WKAF+PTT+N+GRG EFEGAV+ALFHLL +++K AL EAFYR LPN+ +L+TV VFL V+Y QGF+ LPVRS RGQ G+YPIKLFYTSN PI+LQSAL SN++ SQLLY+K+ N V +LG W ++ YS ++ + GL+YY+ P S + +P + Y+ F+L ACA+FS+TWI+VSG+S RDV+KQ KEQ +V+ G R++++ +EL + IPTAAAFGG IGAL+V +D +G +GSGT IL+A T IY Sbjct: 173 GYGLGSGISLFTATNIAEQIFWKAFAPTTVNNGRGTEFEGAVVALFHLLSVRKDKKRALVEAFYRDYLPNMFQVLSTVFVFLFVLYLQGFRYELPVRSTRTRGQVGSYPIKLFYTSNTPIMLQSALTSNIFLTSQLLYQKFPNNPIVKMLGVWGTRSDAPYSPNA-AISGLSYYIQPPFSFTEALLDPIKTVVYVTFVLGACAMFSRTWIDVSGTSPRDVSKQFKEQGLVINGRRETSVYRELKKVIPTAAAFGGATIGALSVGSDLLGTLGSGTSILMATTTIY 456
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SC61A_YEAST (Protein transport protein SEC61 OS=Saccharomyces cerevisiae GN=SEC61 PE=1 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 4.009e-88 Identity = 160/283 (56.54%), Postives = 207/283 (73.14%), Query Frame = 2 Query: 2 GYGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWK-ESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 GYGLGSGISLF AT I E I W+AF+PTT+NSGRG EFEGAVIA FHLL +++K AL EAFYR NLPN+ +L TV +FL V+Y QGF+ LP+RS RGQ G YPIKLFYTSN PI+LQSAL SN++ ISQ+L++KY N + L+G W G + + GLAYY+ SL++ +P + Y+ F+L +CA+FSKTWIE+SG+S RD+AKQ K+Q MV+ G R++++ +EL + IPTAAAFGG IGAL+V +D +G +GSG IL+A T IY Sbjct: 174 GYGLGSGISLFTATNIAEQIFWRAFAPTTVNSGRGKEFEGAVIAFFHLLAVRKDKKRALVEAFYRTNLPNMFQVLMTVAIFLFVLYLQGFRYELPIRSTKVRGQIGIYPIKLFYTSNTPIMLQSALTSNIFLISQILFQKYPTNPLIRLIGVWGIRPGTQGPQMALSGLAYYIQPLMSLSEALLDPIKTIVYITFVLGSCAVFSKTWIEISGTSPRDIAKQFKDQGMVINGKRETSIYRELKKIIPTAAAFGGATIGALSVGSDLLGTLGSGASILMATTTIY 456
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SC61A_SCHPO (Protein transport protein sec61 subunit alpha OS=Schizosaccharomyces pombe GN=sec61 PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 4.149e-85 Identity = 157/289 (54.33%), Postives = 201/289 (69.55%), Query Frame = 2 Query: 2 GYGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNL-------PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 GYGLGSGISLFIATI CE+I WKAFSPTT + G +FEGAVI +++ T NK AL +AF+R L PN+ N AT+LVF +V+Y Q F+V +P+RS+ RG + +P+KL YTSN PI+LQSAL SNL+F S+LL+ ++S NF V LG W+++ SG L+YY++ PAS D +P H L Y+ F + ACALFSK WIEVSG+S RDVAKQLK QQ+VM GHR+ ++ KEL R IPTAA G +GAL V +D +GA+GSGT +LL T IY Sbjct: 174 GYGLGSGISLFIATINCENIFWKAFSPTTYHIANGVQFEGAVINFVYVMFTWDNKAAALYQAFFRSGLTSSQIQLPNLWNFFATLLVFGVVIYLQDFRVEIPIRSQKFRGYRSTFPVKLLYTSNTPIMLQSALTSNLFFASRLLFNRFSSNFLVRFLGVWEQTATSG-------LSYYLSPPASFQDALIDPIHTLVYVFFTMFACALFSKLWIEVSGASPRDVAKQLKSQQLVMAGHREGSMYKELKRIIPTAAWLSGAVVGALAVASDLLGALGSGTAVLLCTTTIY 455
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_METTH (Preprotein translocase subunit secY OS=Methanobacterium thermoautotrophicum GN=secY PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.192e-41 Identity = 103/287 (35.89%), Postives = 152/287 (52.96%), Query Frame = 2 Query: 5 YGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVR----SKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 +G GSG+ LFIA + + II AF+P + + G G + +LL T Q+ F LP +LA + VFL+VVY + +V +P+ + +RG G YP++ Y SNMP+IL SAL+ N+ ++ + + +LG + V GLAY +TAP S+ + +PF +FY V + C LF+ W+E+S R VA+QL + M +PG R S +K L RYIPT GG +G L +AD G++G GTG+LL V I+Y Sbjct: 168 WGFGSGVGLFIAAGVSQEIIVGAFNPLSAPTQPGVP-AGRITGFLYLLFTGQSP------DFQYYVLP----VLALIAVFLVVVYAESMRVEIPISMGGGKRLSRGAVGKYPLRFIYASNMPVILTSALLLNVQLLANVFQK-----LGYPILGTVSNGQ------AVDGLAYLLTAPRSIDALILDPFRVVFYAVVFIGLCVLFAWLWVEISNIGPRHVARQLYQMGMQIPGFRSSRGQFEKILKRYIPTITILGGAFVGLLAFVADLTGSLGGGTGVLLTVGIVY 432
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_METVA (Preprotein translocase subunit secY OS=Methanococcus vannielii GN=secY PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.066e-40 Identity = 99/283 (34.98%), Postives = 150/283 (53.00%), Query Frame = 2 Query: 5 YGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 YG+GSGI LFIA + ++I AF EG + F + VG+L AF I +L+T+ VFL+VVY + +V +P+ +G G YPIK Y SN+P+IL +AL +N+ F++ +G +YS + V G+AYY + P ++++ ++P HA+FY + M+ C LF W+E SG A+ +AK+L M + G R S ++++ L RYI G +G L ADF GA+G GTG+LL V+I+Y Sbjct: 163 YGIGSGIGLFIAAGVAQTIFVGAFGA-----------EGYLWKFFSAM-----SVGSLGIAF-----EYILPILSTLFVFLVVVYVESIRVEIPLAHGRVKGAVGKYPIKFIYVSNLPVILAAALFANIQL----------WGMFLDRMGYPILGQYS-NGTAVSGIAYYFSTPYGISNIISDPLHAIFYTLMMVIFCILFGLFWVETSGLDAKSMAKKLGNLDMAIKGFRKSQKSIEQRLKRYIKPITVMGSAFVGFLAAAADFTGALGGGTGVLLTVSIVY 413
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_PYRAB (Preprotein translocase subunit secY OS=Pyrococcus abyssi GN=secY PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.057e-40 Identity = 103/288 (35.76%), Postives = 159/288 (55.21%), Query Frame = 2 Query: 5 YGLGSGISLFIATIICESIIWKAFSPTT----INSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNL-PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHR--DSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 +G+GSGISLFIA + + I+ ++ +P T I+ G I F I K G L+ A YR P++ ++AT++VFL+VVYF+ +V +P+ + +G YPI+ Y SN+PIIL AL +N+ +++L R L W + PVGG YV P S+ + NP AL YL+ + + +F W+E++G AR +A+QL+ + +PG R L++ L +YIP +G + + + VLADF+GA+G+GTGILL V I+Y Sbjct: 171 WGIGSGISLFIAAGVSQRILTRSLNPLTDPNIIDPLTGKPAIVGAIPYFIQHILK----GDLKGALYRGGTAPDMMAVIATIIVFLVVVYFESMRVEIPLGYRGVT-IRGRYPIRFLYVSNIPIILTFALYANIQLWARVLDR---------LGHPWLGTFDPTTGNPVGGFVLYVIPPRSIFTVIDNPVRALVYLILTVISSLIFGFLWVELTGLDARTIARQLQRAGLQIPGFRRDPRTLERVLQKYIPYVTFWGSLTVALIAVLADFLGALGTGTGILLTVGILY 444
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_PYRHO (Preprotein translocase subunit secY OS=Pyrococcus horikoshii GN=secY PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.635e-39 Identity = 102/290 (35.17%), Postives = 165/290 (56.90%), Query Frame = 2 Query: 5 YGLGSGISLFIATIICESIIWKAFSPTTINS------GRGAEFEGAVIALFHLLITKQNKVGALREAFYRQ-NLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHR--DSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 +G+GSGISLFIA + + I+ ++ +P T + G+ A + H+L G L+ A YR + P++ + AT++VFL+VVYF+ +V +P+ + +G YPIK Y SN+PIIL AL +N+ +++L R F LG++ +G+ P+GG YV P ++ + NP A+ YL+ + LF W+E++G AR +A+QL+ + +PG R L++ L +YIP +G + + ++VLADF+GA+G+GTGILL V I+Y Sbjct: 171 WGIGSGISLFIAAGVSQRILTRSLNPLTDPNIIDPLTGKPAIVGAIPYFIQHILD------GDLKGALYRGGSAPDMIAVTATIIVFLVVVYFESMRVEIPLGYRGVT-IRGRYPIKFLYVSNIPIILTFALYANIQLWARVLDR-----FGHPWLGRF--DPVTGN--PIGGFVLYVIPPRNIFTVIDNPVRAIIYLILTIIFSLLFGFLWVELTGLDARTIARQLQRAGLQIPGFRRDPRTLERVLQKYIPYVTFWGSLTVALISVLADFLGALGTGTGILLTVGILY 444
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_PYRFU (Preprotein translocase subunit secY OS=Pyrococcus furiosus GN=secY PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.635e-39 Identity = 104/288 (36.11%), Postives = 165/288 (57.29%), Query Frame = 2 Query: 5 YGLGSGISLFIATIICESIIWKAFSPTT----INSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQ-NLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 +G+GSGISLFIA + ++I+ ++ +P T I+ G I F I K G L A YR + P++ +++AT++VF IVVYF+ +V +P+ + +G+YPI+ Y SN+PIIL AL +N+ +++L R G+ + LG++ + S P+ G YV P ++ + NP A+ YL+ + LF W+E++G AR +A+QL+ + +PG R L+K L RYIP +G + + + VLADF+GA+G+GTGILL V I+Y Sbjct: 171 WGIGSGISLFIAAGVSQTILTRSLNPLTDPNIIDPLTGQPAIVGAIPYFIQHILK----GDLWGAIYRGGSAPDMLSVVATIVVFFIVVYFESMRVEIPLGYRGVT-VRGSYPIRFLYVSNIPIILTFALYANIQLWARVLDRL--GHPW---LGRFDPTTGS----PISGFVLYVIPPRNIFSVIDNPVRAIVYLILTVIFSLLFGYLWVELTGLDARSIARQLQRAGLQIPGFRRDPRTLEKVLQRYIPYVTFWGSLTVALIAVLADFLGALGTGTGILLTVGILY 444 The following BLAST results are available for this feature:
BLAST of CF835523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835523 ID=CF835523; Name=CF835523; organism=Citrus sinensis; type=EST; length=847bpback to top |