CF835523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_METJA (Preprotein translocase subunit secY OS=Methanocaldococcus jannaschii GN=secY PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 4.970e-38 Identity = 93/286 (32.52%), Postives = 148/286 (51.75%), Query Frame = 2 Query: 5 YGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI---TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 YG+GSGI LFIA + ++I A P EG + + LI Q +PNI ++ T++VFL+VVY + +V +P+ +G G YPIK Y SN+P+IL +AL +N+ LYR + +LG ++ V G+AYY++ P L+ + ++P HA+ Y++ M+ C +F W+E +G + +AK++ M + G R S ++ L RYIP +G L +A+F+GA+G GTG+LL V+I+Y Sbjct: 164 YGIGSGIGLFIAAGVSQTIFVGALGP-----------EGYLWKFLNSLI---------------QGVPNIEYIAPIIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVGKYPIKFVYVSNIPVILAAALFANIQLWGLALYR-----MGIPILGHYEGGR------AVDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLGMAIKGFRKSEKAIEHRLKRYIPPLTVMSSAFVGFLATIANFIGALGGGTGVLLTVSIVY 412
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: YGMH_SCHPO (Uncharacterized protein C19G7.17 OS=Schizosaccharomyces pombe GN=SPBC19G7.17 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.496e-34 Identity = 82/286 (28.67%), Postives = 147/286 (51.40%), Query Frame = 2 Query: 2 GYGLGSGISLFIATIICESIIWKAFS--PTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESE-YSGHSIP-VGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIY 847 G+GLGSG L + + I +I+W S +N ++++GA++ L + +NK +LR +R + L + VF +Y ++ +P+RS RG + +P+KL YTS +P+I +++S+L + LY + LL ++ + ++ H + VGGL Y++ P L++ +P H + Y + ++ FS W+ + RDV KE Q+V+ G+R++ + KEL + IP AA + L+V+A A G G+L+A ++Y Sbjct: 174 GHGLGSGPVLLLGSHILGNIMWDVLSLHRYPVNESGDSQYQGALVGFAFNLFSFKNKFSSLRSILFRSEGLSFVQFLVCIAVFATFMYTLNIRIDVPIRSSRVRGVRQNFPLKLLYTSVIPLIYFYSILSHLLVFAYALYSLCPNSLITRLLVQYSPIDTFAEHKLQLVGGLVYFLYPPLGLSEALLHPVHTVIYTITLICITIYFSLLWMNATAGGPRDVLLFFKENQLVIAGYREATMLKELEKIIPIAAKLSAFFVSILSVIAGIF-ASTFGVGVLIASALVY 458
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SSH1_YEAST (Sec sixty-one protein homolog OS=Saccharomyces cerevisiae GN=SSH1 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.287e-33 Identity = 83/285 (29.12%), Postives = 142/285 (49.82%), Query Frame = 2 Query: 2 GYGLGSGISLFIATIICESIIWKAFSPTTINSGRG--AEFEGAVIALFHLLITKQNK-VGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFIS----QLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAV 835 G+G SG + +I +++ F + I G E +GA+I L L +K +G + AF R LPN+T + + + +IV Y Q +V LP+RS ARG YPIKL YT + ++ ++ ++ + QL+ + + ++G + E+ + ++P L+ + + P + Y F+L F+ W +SGSSARDVA + K+Q + + G R+ N+ KELN+ IP AA G + +TV+ + +G G GI++ + Sbjct: 174 GFGFSSGAMIINTVVIATNLVADTFGVSQIKVGEDDQTEAQGALINLIQGLRSKHKTFIGGIISAFNRDYLPNLTTTIIVLAIAIIVCYLQSVRVELPIRSTRARGTNNVYPIKLLYTGCLSVLFSYTILFYIHIFAFVLIQLVAKNEPTHIICKIMGHY-ENANNLLAVPTFPLSLLAPPTSFFKGVTQQPLTFITYSAFILVTGIWFADKWQAISGSSARDVALEFKDQGITLMGRREQNVAKELNKVIPIAAVTGASVLSLITVIGESLGLKGKAAGIVVGI 457
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_HALVO (Preprotein translocase subunit secY OS=Halobacterium volcanii GN=secY PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.884e-31 Identity = 92/297 (30.98%), Postives = 149/297 (50.17%), Query Frame = 2 Query: 5 YGLGSGISLFIATIICESIIWKAFSPTTIN--SGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLAD-------MAANP----FHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG-SGTGILLAVTIIY 847 +G+GSG+ LFI + + ++ FS + SG A + G + L + L F Q + L+ T+L+F IVVY + +V +P+ +G +G +P+KL Y S +P+IL AL +N+ F+ + L + G + W SG GGL YY+ S +D +A+P L L+FM+ A+F+ W+E +G + A+Q++ M +PG R + +++ + RYIP GG +G L V+A+ +G IG SGTG+LL V+I Y Sbjct: 180 WGVGSGVGLFIIAGVSQQLVGGLFSWQGLGGTSGFFATWIGIITGAIEL---PASPTDLLSTVFLGQG--QLLALITTLLIFGIVVYAESVRVEIPLSHARVKGARGRFPVKLIYASVLPMILVRALQANIQFLGRFLNSSWVG------MPAWLGQYTSGQ--VTGGLLYYLAPIQSRSDWMWFLGLTSADPLDIAIRVLIDLIFMIVGGAVFAIFWVETTGMGPKSTAQQIQNSGMQIPGFRRNPQVIERVMERYIPQVTVIGGALVGLLAVMANMLGTIGASGTGLLLTVSITY 463
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_HALMA (Preprotein translocase subunit secY OS=Haloarcula marismortui GN=secY PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30 Identity = 90/299 (30.10%), Postives = 145/299 (48.49%), Query Frame = 2 Query: 5 YGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNL---PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADM------AANPFHALFY-----LVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIY 847 +G+GSGI LFI + + ++ + + + G +I ++L IT + G + A Q + + L TVL+F +VVY + +V +P+ + +G +G +P+KL Y S +P+IL AL +N+ F+ ++L + LG + + P GGL Y++ S D A P + L ML A+F+ W+E + AKQ+ M +PG R + ++K L RYIP GG +G L V+A+ +G IG SGTG+LL V+I Y Sbjct: 180 WGVGSGIGLFIVAGVSQRLVGGLLTAPFLGNSEG------IIYTWYLFITGERGTGPVLAADGLQTVLLQGELLGLFTTVLIFAVVVYAESVRVEIPLSNARVKGARGRFPVKLIYASVLPMILVRALQANIQFLGRILNAQLGS--MPAFLGTYANGQ------PTGGLFYFLAPIQSRGDWMWWLEGTAQPVWQILTRVGIDLFVMLVGGAVFAVFWVETTDMGPEATAKQIHNSGMQIPGFRQNVGVIEKVLERYIPQVTVIGGALVGLLAVMANMLGTIGGVSGTGLLLTVSITY 464
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_ARCFU (Preprotein translocase subunit secY OS=Archaeoglobus fulgidus GN=secY PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.193e-29 Identity = 99/303 (32.67%), Postives = 151/303 (49.83%), Query Frame = 2 Query: 5 YGLGSGISLFIATIICESIIWKAFS-PTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLAD------------MAANP-----FHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIY 847 +G+GSG+SLFI I +SI+ F+ NS A I + Q G+ Q I L+ T + L+VV+F+G +V +P+ ARG +G +PIKL Y S +P+I AL +N+ + Q+L+ + V + G++ + V GL +++ +S D AA P H L + ++ +F+ W+E SG AR VA Q+ + M +PG R S L++ L+RYIP GG IG LT++A+ +G IG SGTG+LLAV+I Y Sbjct: 178 WGIGSGVSLFILAGIAQSIVVGLFNWVIPPNSAMPAGIIPRWIWIAQNYPLDQLFTGSGLAFLLIQG--GILALITTAAIILLVVFFEGTRVEIPLAHAVARGARGRFPIKLIYASVLPMIFVRALQANVVALGQVLHAR-----GVTIFGEFVNGK------AVSGLMFFLQPVSSPYDWIPSLVKSQGAAFAAIPDWMIYLHLLIDALILVVGGIIFAWFWVETSGMDARTVASQIAKSGMQVPGFRKSPQVLERVLSRYIPKVTILGGAIIGILTLVANMLGTIGNVSGTGLLLAVSIAY 467
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_HALSA (Preprotein translocase subunit secY OS=Halobacterium salinarium GN=secY PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.953e-28 Identity = 87/304 (28.62%), Postives = 147/304 (48.36%), Query Frame = 2 Query: 5 YGLGSGISLFIATIICESII-----WKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNL---PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPAS-------LADMAANPFHALFY----LVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIY 847 +G+GSGI LFI + +S++ W+ G +G + F +++ + + L + L I LL T+ ++++VVY + +V +P+ +G +G +P+KL Y S +P+IL AL +N+ F+ Q+L N + + W Y G+ GGL YY+ S + A + L L FM+ A+F+ W+E + A+Q++ M +PG R + ++K + RYIP GG +G L V+A+ +G IG SGTG+LL ++I Y Sbjct: 179 WGVGSGIGLFIVAGVSQSLVGGLVFWEG----------GVGSQGLLPTWFDIIVGNVSNMPPLLSGSGIEFLLMQAGILGLLTTLFIYVVVVYAESVRVEIPLSHARVKGARGRFPVKLIYASVLPMILVRALQANIQFLGQIL------NSTLASMPTWL-GVYGGNGQVTGGLFYYLAPIYSPNAWMWWTSGATAARWQVLIRIAIDLSFMIIGGAIFAIFWVETADMGPDATARQIQNSGMQIPGFRKNQGVIEKVMERYIPQVTVIGGALVGLLAVMANMLGTIGNVSGTGLLLTISITY 465
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_AERPE (Preprotein translocase subunit secY OS=Aeropyrum pernix GN=secY PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.314e-27 Identity = 79/284 (27.82%), Postives = 139/284 (48.94%), Query Frame = 2 Query: 2 GYGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHL-LITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTII 844 G+G+GS ISLFI + + ++W F T + A+I+ L L+ + N P++T T+ +++VY Q +V +P+ S+ +G + P++ Y +N+PI+L LVS+L + +LL + LG + Y +S + YY++ P + A+P ++ +F W+E++G + R+ A++L + + +PG R L++ L RYI + + AL ++AD GA G+GTG+LLAV II Sbjct: 173 GWGIGSAISLFILAGVAQGVVWSIFG-TIPGVAQDYGLVPAIISNPDLTLLARPN------------GFPDLTGFFTTLAAIILLVYLQAMRVEIPITSERFKGIRSRVPLQFIYVTNIPILLVGILVSDLLLVQRLL---------ADYLGV-ESRAYQIYS----SIVYYLSPPRGVVQSIADPVKTAVFIASWTVLSIVFGYMWVEIAGLNPREQAERLIKGGLAIPGMRSDPRVLERVLRRYIYPLTFLSSLIVAALVIVADIFGAYGTGTGLLLAVGII 429
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_SULSO (Preprotein translocase subunit secY OS=Sulfolobus solfataricus GN=secY PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.404e-24 Identity = 81/287 (28.22%), Postives = 136/287 (47.39%), Query Frame = 2 Query: 2 GYGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNL-PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYY----VTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTI 841 G+GLGSG+SLFI + + + W F +++S G ALF L + + + + + P++ L+ T+ + +I +Y + +PV S+ RG + P+ Y S++P+I + L S++ + L Y N+L V G+ ++ P S+ + +P AL Y V + LF W++V+G A+QL E + +PG R++ ++ L RYI A F + +G + V A +GA G+G GILLAVTI Sbjct: 173 GWGLGSGVSLFILAGVMKIMFWDMFGIASVSSQNLPI--GFFPALFTALASHSDVLNLIVNTSTKNLFQPDLVGLVTTIALIIITIYLTTMTIEIPVTSQKLRGIRRTIPLNFLYVSSIPVIFVAVLGSDIQLFASL--ASYVSPSASNILN------------TVSGVFFFPPPNSAIPHSIYAVVLDPLGALEYAVVFIVLSILFGILWVDVAGLDPATQAQQLVEAGIEIPGVRNNPKIIEGILARYIYPLAFFSSIIVGLIAVFATLLGAYGTGIGILLAVTI 443
BLAST of CF835523 vs. ExPASy Swiss-Prot
Match: SECY_SULAC (Preprotein translocase subunit secY OS=Sulfolobus acidocaldarius GN=secY PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.099e-24 Identity = 75/287 (26.13%), Postives = 133/287 (46.34%), Query Frame = 2 Query: 2 GYGLGSGISLFIATIICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNL-----PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSN--LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTI 841 G+GLGSG+SLFI I + I W F ++ S + + F LL++ L+E + P++ L+ATV + +++VY + +PV ++ RG + P+ Y S++P+I S L +++ + L N N + P G+ P S+ + +P A Y + +F WI+V+G + A+Q+ + +PG R + ++ L++YI F + +G + V+A F+G G+G G+LLA+TI Sbjct: 169 GWGLGSGVSLFIMAGIMKVIFWNMFGIVSVQS------QNLPVGFFPLLVSYITSGRNLQEIVLNTSSTTPYQPDLIGLIATVGLTILIVYLVNTNIYIPVTTQRLRGIRTTVPLNFLYVSSIPVIFVSVLGADIQLFASL------ANSISNSASGILTDIANAFFFPPQGV------PHSVYALVVDPVGAAIYAAVFIVLSIVFGMLWIDVAGLDPKTQAEQMIRSGIEIPGMRTNPRIIEGILSKYIYALGFFSSLIVGLIAVVATFLGTYGTGVGLLLAITI 437 The following BLAST results are available for this feature:
BLAST of CF835523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835523 ID=CF835523; Name=CF835523; organism=Citrus sinensis; type=EST; length=847bpback to top |