CF835524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_DISMA (Protein transport protein Sec61 subunit alpha OS=Dissostichus mawsoni GN=sec61a PE=2 SV=3) HSP 1 Score: 228.409 bits (581), Expect = 3.136e-59 Identity = 114/173 (65.90%), Postives = 137/173 (79.19%), Query Frame = -2 Query: 227 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 739 LY ISQ+L ++SGNF VNLLG W ++ G + PV GL YY++ P S + +P HA Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHR++++ ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G G Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDATSGGPARAYPVAGLCYYLSPPESFGSVLDDPVHAAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: S61A1_CANFA (Protein transport protein Sec61 subunit alpha isoform 1 OS=Canis familiaris GN=SEC61A1 PE=1 SV=3) HSP 1 Score: 227.639 bits (579), Expect = 5.349e-59 Identity = 114/173 (65.90%), Postives = 139/173 (80.35%), Query Frame = -2 Query: 227 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 739 LY ISQ+L ++SGN V+LLG W ++ G + PVGGL +Y++ P S + +P HA+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHR++++ ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G G Sbjct: 301 LYVISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCHYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_HEMAM (Protein transport protein Sec61 subunit alpha OS=Hemitripterus americanus GN=sec61a PE=2 SV=3) HSP 1 Score: 226.868 bits (577), Expect = 9.124e-59 Identity = 114/173 (65.90%), Postives = 137/173 (79.19%), Query Frame = -2 Query: 227 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 739 LY ISQ+L ++SGNF VNLLG W ++ G + PV GL YY++ P S + +P HA Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHR++++ ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G G Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDATSGGPARAYPVAGLCYYLSPPESFGSVLDDPVHAGIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_HALRO (Protein transport protein Sec61 subunit alpha OS=Halocynthia roretzi PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.457e-56 Identity = 114/173 (65.90%), Postives = 135/173 (78.03%), Query Frame = -2 Query: 227 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 739 LY ISQ+L ++ GNFF+ LLG W++ E G S PV L YY++ P S M +P H L Y+ FML +CA FSKTWIEVSGS+A+DVAKQLKEQQMVM GHR+ ++ ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G G Sbjct: 301 LYVISQMLAIRFRGNFFIGLLGVWEDVEGGGPARSYPVA-LCYYLSPPESFFSMFLDPIHGLLYITFMLGSCAFFSKTWIEVSGSAAKDVAKQLKEQQMVMRGHREKSMIHELNRYIPTAAAFGGLCIGALSVLADFIGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGMG 471
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_PYRSA (Protein transport protein Sec61 subunit alpha OS=Pyrenomonas salina PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.245e-56 Identity = 103/160 (64.38%), Postives = 135/160 (84.38%), Query Frame = -2 Query: 266 LYFISQLLYRKYSGNFFVNLLGKWKESEYS--GHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFET 739 LYFISQ+LY++Y N +++LG+W+E E S G PVGG+AYY++ S A++ ++P HAL Y++F+L +CALFSKTWI+VSG+SA DV+KQL++QQMVM G R S++Q+ELNRYIPTAAAFGG+CIGAL+++ADFMGAIGSGTGILLAVT IYQ +ET Sbjct: 306 LYFISQILYKRYPENIIIHILGRWEEPEMSVSGQMRPVGGIAYYISPLNSFAEIVSDPVHALLYIIFILASCALFSKTWIQVSGTSASDVSKQLRDQQMVMKGFRASSMQRELNRYIPTAAAFGGMCIGALSIVADFMGAIGSGTGILLAVTTIYQSWET 465
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_NEUCR (Protein transport protein SEC61 subunit alpha OS=Neurospora crassa GN=sec-61 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.011e-49 Identity = 95/162 (58.64%), Postives = 117/162 (72.22%), Query Frame = -2 Query: 254 LYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 739 ++ ISQ+LY ++S N V L G W+ E + V GL YY++ P + D +P H Y+ +MLTACA+FSKTWIEVSGSS RDVAKQLK+Q +VM GHR+ ++ KEL R IPTAAAFGG CIGAL+V +D MGA+GSGTG LLAVTIIY YFE KE Sbjct: 303 VFLISQMLYSRFSENLLVRLFGVWEAKEGTAQLSAVSGLVYYMSPPLNFKDALLDPIHTAVYIAYMLTACAVFSKTWIEVSGSSPRDVAKQLKDQGLVMAGHREQSMYKELKRIIPTAAAFGGACIGALSVASDLMGALGSGTGTLLAVTIIYGYFEIAAKE 464
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_SCHPO (Protein transport protein sec61 subunit alpha OS=Schizosaccharomyces pombe GN=sec61 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.151e-43 Identity = 85/162 (52.47%), Postives = 111/162 (68.52%), Query Frame = -2 Query: 254 LYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 739 L+F S+LL+ ++S NF V LG W+++ SG L+YY++ PAS D +P H L Y+ F + ACALFSK WIEVSG+S RDVAKQLK QQ+VM GHR+ ++ KEL R IPTAA G +GAL V +D +GA+GSGT +LL T IY Y+E +KE Sbjct: 310 LFFASRLLFNRFSSNFLVRFLGVWEQTATSG-------LSYYLSPPASFQDALIDPIHTLVYVFFTMFACALFSKLWIEVSGASPRDVAKQLKSQQLVMAGHREGSMYKELKRIIPTAAWLSGAVVGALAVASDLLGALGSGTAVLLCTTTIYGYYEQLQKE 464
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_DEBHA (Protein transport protein SEC61 subunit alpha OS=Debaryomyces hansenii GN=SEC61 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.019e-43 Identity = 81/162 (50.00%), Postives = 111/162 (68.52%), Query Frame = -2 Query: 254 LYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 739 ++ ISQ+L+ ++ N FV +LG W + + V GLAYY+ P S + +P + Y++F+L +CA+FS TWIE+SG+S RDVAKQ KEQ +V+ GHRD++ +EL + IPTAAAFGG IGAL+V D MG +GSGT ILL+VT IY Y+E KE Sbjct: 303 IFIISQMLFVRWPNNIFVKILGSWDTRQGAAQLYAVSGLAYYIQPPLSFTEALLDPIKTIIYIIFVLGSCAVFSTTWIEISGASPRDVAKQFKEQGLVIAGHRDTSAYRELKKIIPTAAAFGGATIGALSVFCDLMGTLGSGTSILLSVTTIYGYYELAMKE 464
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_YARLI (Protein transport protein SEC61 subunit alpha OS=Yarrowia lipolytica GN=SEC61 PE=3 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.042e-42 Identity = 84/162 (51.85%), Postives = 111/162 (68.52%), Query Frame = -2 Query: 254 LYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 739 ++ ISQ+L++K+ N V LLG W E PV G+AYY+ P + + A+P + Y+ F+L CA+FS TWIE+SGSS RDVAKQ KEQ +V+ G R+++ KEL R IPTAAAFGG IGAL+V +D +GA+ SGTGIL+AVT IY Y+E KE Sbjct: 303 IFIISQMLFKKFPTNVLVRLLGVWDGREGMQQLFPVSGIAYYMQPPFNAKEALADPVKTVIYIAFVLGVCAVFSATWIEISGSSPRDVAKQFKEQGLVIAGRRETSAYKELKRIIPTAAAFGGATIGALSVASDLLGALSSGTGILMAVTTIYGYYEMAAKE 464
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_CANAL (Protein transport protein SEC61 subunit alpha OS=Candida albicans GN=SEC61 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.013e-41 Identity = 84/162 (51.85%), Postives = 107/162 (66.05%), Query Frame = -2 Query: 254 LYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 739 ++ ISQLL+ ++ N FV LLG W S GGLAYY+ P + D +P Y+ F+L +CA+FS TWIE+SG+S RDVAKQ KEQ +V+ GHRD++ KEL + I AAAFGG IGAL+V+ D MG +GSGT ILLAVT IY Y+E KE Sbjct: 303 IFIISQLLFMRWPNNLFVKLLGTWDARAGSSQLYANGGLAYYIQPPFNFTDALLDPIKTTIYIAFVLGSCAVFSTTWIEISGTSPRDVAKQFKEQGLVIAGHRDTSAYKELKKIIHIAAAFGGATIGALSVVCDLMGTLGSGTSILLAVTTIYGYYELAVKE 464 The following BLAST results are available for this feature:
BLAST of CF835524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835524 ID=CF835524; Name=CF835524; organism=Citrus sinensis; type=EST; length=740bpback to top |