CF835524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_KLULA (Protein transport protein SEC61 subunit alpha OS=Kluyveromyces lactis GN=SEC61 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.851e-41 Identity = 82/164 (50.00%), Postives = 114/164 (69.51%), Query Frame = -2 Query: 254 LYFISQLLYRKYSGNFFVNLLGKW--KESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 739 ++ ISQ+LY+++S N V LLG W + +G + + GL+YY+ P S+ D +P + Y+ F+L ACALFSKTWIE+SG+S RDVAKQ K+Q + + G R++N+ KEL + IPTAAAFGG IGAL+V +D +G +GSGT IL+A T IY Y+E KE Sbjct: 302 IFLISQILYQRFSTNPLVKLLGVWGTRAGAPAGQQVALSGLSYYIQPPFSVTDALLDPIKTVVYVGFVLGACALFSKTWIEISGTSPRDVAKQFKDQGLTINGKRETNVYKELKKIIPTAAAFGGAVIGALSVGSDLLGTLGSGTSILMATTTIYGYYEVAAKE 465
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_HANAN (Protein transport protein SEC61 subunit alpha OS=Hansenula anomala GN=SEC61 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.911e-40 Identity = 81/161 (50.31%), Postives = 108/161 (67.08%), Query Frame = -2 Query: 254 YFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 736 + ISQ+L++++ N V L G W S GLAYY+ P SL + +P + Y+ F+L+ CALFSKTWIE+SG++ RDVAKQ K+Q +V+ G R++++ KEL R IPTAAAFGG IGAL+V D +G +GSGT ILLAVT IY Y+E KE Sbjct: 304 FIISQMLFQRFPLNPVVRLFGVWDARPGSAQLFASNGLAYYIQPPLSLTEALLDPIKTVIYVSFVLSVCALFSKTWIEISGTAPRDVAKQFKDQGLVIAGRRETSVYKELKRIIPTAAAFGGASIGALSVACDLLGTLGSGTSILLAVTTIYSYYEIAAKE 464
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_CANGA (Protein transport protein SEC61 subunit alpha OS=Candida glabrata GN=SEC61 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39 Identity = 81/163 (49.69%), Postives = 110/163 (67.48%), Query Frame = -2 Query: 254 LYFISQLLYRKYSGNFFVNLLGKWK-ESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 739 ++ ISQ+L++KY N + L G W +G +P+ G++YY+ SL +P + Y F+L CALFSKTWIE+SG+SA+DVAKQ KEQ MV+ G R++++ KEL + IPTAAAFGG IGAL+V +D +GA+GSG ILLA T IY Y+E KE Sbjct: 302 IFLISQILFQKYPSNPVIRLFGVWGIRPGTNGPQVPLSGISYYLQPIGSLKMALLDPIKTVIYTAFVLGTCALFSKTWIEISGTSAKDVAKQFKEQGMVINGKRETSVYKELKKIIPTAAAFGGATIGALSVGSDLLGALGSGASILLATTTIYGYYEVAAKE 464
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_ASHGO (Protein transport protein SEC61 subunit alpha OS=Ashbya gossypii GN=SEC61 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.605e-39 Identity = 79/165 (47.88%), Postives = 115/165 (69.70%), Query Frame = -2 Query: 254 LYFISQLLYRKYSGNFFVNLLGKW---KESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 739 ++ SQLLY+K+ N V +LG W ++ YS ++ + GL+YY+ P S + +P + Y+ F+L ACA+FS+TWI+VSG+S RDV+KQ KEQ +V+ G R++++ +EL + IPTAAAFGG IGAL+V +D +G +GSGT IL+A T IY Y+ET KE Sbjct: 302 IFLTSQLLYQKFPNNPIVKMLGVWGTRSDAPYSPNAA-ISGLSYYIQPPFSFTEALLDPIKTVVYVTFVLGACAMFSRTWIDVSGTSPRDVSKQFKEQGLVINGRRETSVYRELKKVIPTAAAFGGATIGALSVGSDLLGTLGSGTSILMATTTIYGYYETAAKE 465
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SC61A_YEAST (Protein transport protein SEC61 OS=Saccharomyces cerevisiae GN=SEC61 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.985e-38 Identity = 76/163 (46.63%), Postives = 111/163 (68.10%), Query Frame = -2 Query: 254 LYFISQLLYRKYSGNFFVNLLGKWK-ESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 739 ++ ISQ+L++KY N + L+G W G + + GLAYY+ SL++ +P + Y+ F+L +CA+FSKTWIE+SG+S RD+AKQ K+Q MV+ G R++++ +EL + IPTAAAFGG IGAL+V +D +G +GSG IL+A T IY Y+E KE Sbjct: 303 IFLISQILFQKYPTNPLIRLIGVWGIRPGTQGPQMALSGLAYYIQPLMSLSEALLDPIKTIVYITFVLGSCAVFSKTWIEISGTSPRDIAKQFKDQGMVINGKRETSIYRELKKIIPTAAAFGGATIGALSVGSDLLGTLGSGASILMATTTIYGYYEAAAKE 465
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SECY_METVA (Preprotein translocase subunit secY OS=Methanococcus vannielii GN=secY PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.620e-25 Identity = 57/153 (37.25%), Postives = 91/153 (59.48%), Query Frame = -2 Query: 239 FVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 691 F++ +G +YS + V G+AYY + P ++++ ++P HA+FY + M+ C LF W+E SG A+ +AK+L M + G R S ++++ L RYI G +G L ADF GA+G GTG+LL V+I+Y+ +E +E+ SEL Sbjct: 276 FLDRMGYPILGQYS-NGTAVSGIAYYFSTPYGISNIISDPLHAIFYTLMMVIFCILFGLFWVETSGLDAKSMAKKLGNLDMAIKGFRKSQKSIEQRLKRYIKPITVMGSAFVGFLAAAADFTGALGGGTGVLLTVSIVYRLYEQLVQEQLSEL 427
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SECY_METTH (Preprotein translocase subunit secY OS=Methanobacterium thermoautotrophicum GN=secY PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.920e-24 Identity = 55/134 (41.04%), Postives = 80/134 (59.70%), Query Frame = -2 Query: 239 VGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 634 V GLAY +TAP S+ + +PF +FY V + C LF+ W+E+S R VA+QL + M +PG R S +K L RYIPT GG +G L +AD G++G GTG+LL V I+Y+ +E +E+ ++ Sbjct: 313 VDGLAYLLTAPRSIDALILDPFRVVFYAVVFIGLCVLFAWLWVEISNIGPRHVARQLYQMGMQIPGFRSSRGQFEKILKRYIPTITILGGAFVGLLAFVADLTGSLGGGTGVLLTVGIVYRLYEEIAQEQLMDM 446
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SECY_PYRAB (Preprotein translocase subunit secY OS=Pyrococcus abyssi GN=secY PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.275e-24 Identity = 53/135 (39.26%), Postives = 84/135 (62.22%), Query Frame = -2 Query: 239 PVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 637 PVGG YV P S+ + NP AL YL+ + + +F W+E++G AR +A+QL+ + +PG R L++ L +YIP +G + + + VLADF+GA+G+GTGILL V I+Y+++E +E+ SE+ Sbjct: 324 PVGGFVLYVIPPRSIFTVIDNPVRALVYLILTVISSLIFGFLWVELTGLDARTIARQLQRAGLQIPGFRRDPRTLERVLQKYIPYVTFWGSLTVALIAVLADFLGALGTGTGILLTVGILYRFYEEIAREQISEM 458
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SECY_PYRHO (Preprotein translocase subunit secY OS=Pyrococcus horikoshii GN=secY PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23 Identity = 50/135 (37.04%), Postives = 84/135 (62.22%), Query Frame = -2 Query: 239 PVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 637 P+GG YV P ++ + NP A+ YL+ + LF W+E++G AR +A+QL+ + +PG R L++ L +YIP +G + + ++VLADF+GA+G+GTGILL V I+Y+++E +E+ +E+ Sbjct: 324 PIGGFVLYVIPPRNIFTVIDNPVRAIIYLILTIIFSLLFGFLWVELTGLDARTIARQLQRAGLQIPGFRRDPRTLERVLQKYIPYVTFWGSLTVALISVLADFLGALGTGTGILLTVGILYRFYEEIAREQITEM 458
BLAST of CF835524 vs. ExPASy Swiss-Prot
Match: SECY_PYRFU (Preprotein translocase subunit secY OS=Pyrococcus furiosus GN=secY PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23 Identity = 51/135 (37.78%), Postives = 82/135 (60.74%), Query Frame = -2 Query: 239 PVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDS--NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASEL 637 P+ G YV P ++ + NP A+ YL+ + LF W+E++G AR +A+QL+ + +PG R L+K L RYIP +G + + + VLADF+GA+G+GTGILL V I+Y+++E +E+ +E+ Sbjct: 324 PISGFVLYVIPPRNIFSVIDNPVRAIVYLILTVIFSLLFGYLWVELTGLDARSIARQLQRAGLQIPGFRRDPRTLEKVLQRYIPYVTFWGSLTVALIAVLADFLGALGTGTGILLTVGILYRFYEEIAREQITEM 458 The following BLAST results are available for this feature:
BLAST of CF835524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835524 ID=CF835524; Name=CF835524; organism=Citrus sinensis; type=EST; length=740bpback to top |