CF835527

Overview
NameCF835527
Unique NameCF835527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.018e-13
Identity = 49/129 (37.98%), Postives = 67/129 (51.94%), Query Frame = -1
Query:  403 NPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPE--LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 783
            +PC W  + C + NRVT L L    LSG  +PE   G L  L+ L L  N + G++P +L    +L  L L  N  SG+IP  L  L  LV L L  N  TG+I      ++ LK + + +N L G+IP
Sbjct:   60 SPCNWAGVKC-ESNRVTALRLPGVALSGD-IPEGIFGNLTQLRTLSLRLNALSGSLPKDLSTSSNLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNSFTGEISSGFTNLTKLKTLFLENNQLSGSIP 186          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.737e-13
Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = -1
Query:  406 DPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPE--LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTI 798
            D    +PC W  + C+   RVT L L    LSG  +PE   G L  L+ L L  N + G++P++LG+   L  L L  N  SG+IP  L  L +LV L L +N  +G+I      ++ LK + + +N L G++
Sbjct:   53 DVKQTSPCNWTGVLCD-GGRVTALRLPGETLSGH-IPEGIFGNLTQLRTLSLRLNGLTGSLPLDLGSCSDLRRLYLQGNRFSGEIPEVLFSLSNLVRLNLAENEFSGEISSGFKNLTRLKTLYLENNKLSGSL 183          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 57/177 (32.20%), Postives = 86/177 (48.59%), Query Frame = -1
Query:  280 NPCTWFHITCNQDNRVTRLDLGNSNLSGRL-VPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFE-NNPRLEGPELLGLASY-------DTNCS*TIDCC 783
            +PC W  + C+   RVT L L  S L G L +  +G L  L+ L L  N++ G IP +  NL  L  L L  N  SG+IP  L  L S++ + L +N+ +G+IP  +   + L  + +  N L G IP       +PL  F  ++ +L G     L+S+       +T C   +D C
Sbjct:   53 SPCNWHGVHCDA-GRVTALRLPGSGLFGSLPIGGIGNLTQLKTLSLRFNSLSGPIPSDFSNLVLLRYLYLQGNAFSGEIPSLLFTLPSIIRINLGENKFSGRIPDNVNSATRLVTLYLERNQLSGPIPEI----TLPLQQFNVSSNQLNGSIPSSLSSWPRTAFEGNTLCGKPLDTC 224          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: TMM_ARATH (Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN=TMM PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 50/132 (37.88%), Postives = 70/132 (53.03%), Query Frame = -1
Query:  337 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS-GPFEHIPLNNFENNPRLEGP 729
            L L  +   G +  ELG L +L+ L+L+KN++ G+IP+       L SLDL  N ++G IP  +  L +L  L LN N LTG +P  L    SL  +D+S N + G IP S      + L +   N RL GP
Sbjct:  164 LVLRENGFLGPIPDELGNLTNLKVLDLHKNHLNGSIPLSFNRFSGLRSLDLSGNRLTGSIPGFV--LPALSVLDLNQNLLTGPVPPTLTSCGSLIKIDLSRNRVTGPIPESINRLNQLVLLDLSYN-RLSGP 292          

HSP 2 Score: 70.0922 bits (170), Expect = 1.626e-11
Identity = 48/119 (40.34%), Postives = 61/119 (51.26%), Query Frame = -1
Query:  403 NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNN-IQGTIPVE-LGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 753
            N+ N++  LDL  + LSG     L  L  LQ L L  N     TIP      LK+L+ L L N NI G IP SL +L SL  L L  N LTG+IP E   +  L  + ++ N L G +P
Sbjct:  274 NRLNQLVLLDLSYNRLSGPFPSSLQGLNSLQALMLKGNTKFSTTIPENAFKGLKNLMILVLSNTNIQGSIPKSLTRLNSLRVLHLEGNNLTGEIPLEFRDVKHLSELRLNDNSLTGPVP 392          

HSP 3 Score: 68.1662 bits (165), Expect = 6.179e-11
Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = -1
Query:  403 RLVPELGKL-EHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 699
            R+   LG+L   LQ L L +N   G IP ELGNL +L  LDL+ N+++G IP S  +   L  L L+ NRLTG IP  +  + +L V+D++ N L G +P
Sbjct:  149 RIPAFLGRLGSSLQTLVLRENGFLGPIPDELGNLTNLKVLDLHKNHLNGSIPLSFNRFSGLRSLDLSGNRLTGSIPGFV--LPALSVLDLNQNLLTGPVP 246          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: PGIP3_PHAVU (Polygalacturonase inhibitor 3 OS=Phaseolus vulgaris GN=PGIP3 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 50/155 (32.26%), Postives = 72/155 (46.45%), Query Frame = -1
Query:  403 TWFHITCNQDN---RVTRLDL---------------------------GNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSL-KVVDVSSNDLCGTIP 774
            TW  + C+ D    RV  LDL                           G +NL G + P + KL  L YL +   N+ G IP  L  +K+L++LD   N +SG +PPS++ L +LV +  + NR++G IP      S L   + +S N L G IP
Sbjct:   66 TWLGVLCDTDTQTYRVNNLDLSGHNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP 220          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: PGIP2_PHAVU (Polygalacturonase inhibitor 2 OS=Phaseolus vulgaris GN=PGIP2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 50/155 (32.26%), Postives = 72/155 (46.45%), Query Frame = -1
Query:  403 TWFHITCNQDN---RVTRLDL---------------------------GNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSL-KVVDVSSNDLCGTIP 774
            TW  + C+ D    RV  LDL                           G +NL G + P + KL  L YL +   N+ G IP  L  +K+L++LD   N +SG +PPS++ L +LV +  + NR++G IP      S L   + +S N L G IP
Sbjct:   66 TWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP 220          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = -1
Query:  451 CTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISS 777
            C W  +TC  D +V  LDL   +L G L PEL +L  L+ L L +N+  G IP E G+ ++L  LDL  N++SG+IPP L+   SL  L L+ N+ +  +  ++V + S
Sbjct:   60 CYWSGVTC-VDGKVQILDLSGYSLEGTLAPELSQLSDLRSLILSRNHFSGGIPKEYGSFENLEVLDLRENDLSGQIPPELSNGLSLKHLLLSGNKFSDDMRIKIVRLQS 167          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13
Identity = 56/161 (34.78%), Postives = 72/161 (44.72%), Query Frame = -1
Query:  403 NPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKN---------NI----------------QGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIP----RELVGISSLKVV---DVSSNDLCGTIP 783
            +PC   W  ITCN DNRV  + L N NL G+L  E+  L  LQ L+L  N         NI                 G IP  +GNL+ L  L L  N  SG IP S+ +L  L +  + DN+L G++P      L G+  L         +N L G IP
Sbjct:   53 DPCGTEWVGITCNNDNRVVSISLTNRNLKGKLPTEISTLSELQTLDLTGNPELSGPLPANIGNLRKLTFLSLMGCAFNGPIPDSIGNLEQLTRLSLNLNKFSGTIPASMGRLSKLYWFDIADNQLEGKLPVSDGASLPGLDMLLQTGHFHFGNNKLSGEIP 213          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13
Identity = 57/168 (33.93%), Postives = 83/168 (49.40%), Query Frame = -1
Query:  355 CT-WFHITCNQDNR-VTRLDLGNSNLSGRL-VPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLIS------------------------LDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN 777
            CT W  +TCN D+  V  L L  + L G + +  + +L +L++L L  NNI GT P  L  LK+L                          LDL NN  +G IP S+ KL  L  L L  N+ +G+IP   + I  LK+++++ N+L GT+P S   +  PL+ F  N
Sbjct:   52 CTKWTGVTCNSDHSSVDALHLAATGLRGDIELSIIARLSNLRFLILSSNNISGTFPTTLQALKNLTELKLDFNEFSGPLPSDLSSWERLQVLDLSNNRFNGSIPSSIGKLTLLHSLNLAYNKFSGEIPD--LHIPGLKLLNLAHNNLTGTVPQS--LQRFPLSAFVGN 215          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.870e-13
Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = -1
Query:  397 SNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGIS-SLKVVDVSSNDLCGTIPTS 714
            SNL+G++ P + KL+HL+ + L   N+ G +P     LK+L  LDL  NN+SG IP SL+ L +L  L L+ N LTG IP      + S   + +S N L G IP S
Sbjct:  108 SNLTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDRNHLTGPIPDSFGKFAGSTPGLHLSHNQLSGKIPYS 214          
The following BLAST results are available for this feature:
BLAST of CF835527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
Y1848_ARATH1.018e-1337.98Probable inactive receptor kinase At1g48480 OS=Ara... [more]
RLK90_ARATH1.737e-1335.34Probable inactive receptor kinase RLK902 OS=Arabid... [more]
Y3288_ARATH2.269e-1332.20Probable inactive receptor kinase At3g02880 OS=Ara... [more]
TMM_ARATH2.269e-1337.88Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN... [more]
PGIP3_PHAVU2.269e-1332.26Polygalacturonase inhibitor 3 OS=Phaseolus vulgari... [more]
PGIP2_PHAVU2.269e-1332.26Polygalacturonase inhibitor 2 OS=Phaseolus vulgari... [more]
MRH1_ARATH2.269e-1339.45Probable LRR receptor-like serine/threonine-protei... [more]
Y5977_ARATH2.963e-1334.78Probable leucine-rich repeat receptor-like protein... [more]
Y5332_ARATH2.963e-1333.93Probable inactive receptor kinase At5g53320 OS=Ara... [more]
PGIP_VITVI3.870e-1342.06Polygalacturonase inhibitor OS=Vitis vinifera GN=p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01G13_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835527 ID=CF835527; Name=CF835527; organism=Citrus sinensis; type=EST; length=798bp
TTTTTTTTACCATTTGACACATTTAATACTTTTTATCCGTAACTCTCATA
GATGGAATAGAAAACACTTGGCTAGTATTGTATTACATCTAAAATTCTCA
TCTTGAAAGTTGAAACATTTTTATGAAGATCACAACGACGCTATTACAGA
TGCATTTAAGCAGTATAATACAATTTACATATATGATGGCTTCATTTCAC
CAATAACACTACGCTTTTTAGGTAAAGACGCTTTCGATCTTCGCGGACAC
ATCTATTCGAAACCTGAGTAGAGCTTGAAGCAACAATCAATCGTTTATGA
GCAGTTTGTGTCATAACTTGCAAGTCCCAGCAACTCTGGACCTTCTAATC
GAGGGTTATTCTCAAAGTTGTTGAGTGGGATGTGTTCAAATGGTCCGCTT
GTAGGAATTGTTCCACACAGATCATTGCTTGAAACATCCACAACTTTGAG
ACTTGAAATTCCAACAAGTTCCCTGGGAATTTGTCCAGTTAGCCGATTAT
CGTTAAGCCGCAAAAAAACAAGAGATTTCAATTTAGCCAAGGAAGGAGGG
ATTTTCCCCGAGATGTTGTTATTATACAAGTCCAAGCTGATGAGGCTCTT
CAAGTTACCGAGCTCGACAGGGATAGTTCCTTGGATGTTGTTTTTGTAAA
GTTCCAGGTATTGCAAATGCTCGAGCTTGCCCAGTTCAGGGACGAGACGG
CCGGATAGATTTGAATTACCCAAATCCAGTCGAGTAACGCGGTTGTCCTG
ATTACAGGTTATGTGAAACCAAGTGCAGGGATTGACGAGAGTTGGATC
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