CF835527

Overview
NameCF835527
Unique NameCF835527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.921e-12
Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = -1
Query:  403 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGI-SSLKVVDVSSNDLCGTIP 729
            LD+ ++ L+G + P LG L  L +L    N+    IP ELG+L +L+  DL  N++SG +P  L KL  L  + + DN L+G +P +L    S L+ + +  N   G++P
Sbjct:  205 LDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPSELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNLLSGTLPVDLFSAESQLQTLVLRENGFSGSLP 314          

HSP 2 Score: 72.4034 bits (176), Expect = 3.276e-12
Identity = 40/112 (35.71%), Postives = 65/112 (58.04%), Query Frame = -1
Query:  403 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 738
            +++LDL  ++ +G L      L++L  L++  N + G IP  LG L  LI L+  +N+ S  IP  L  L +LV   L+ N L+G +P+EL  +S L+++ +  N L GT+P
Sbjct:  178 LSQLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPSELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNLLSGTLP 289          

HSP 3 Score: 72.0182 bits (175), Expect = 4.279e-12
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = -1
Query:  400 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 729
            LDL + +++G +   LG L  L+ L L +N++   +P  LG L +L  LDL  N+ +G +P S + LK+L+ L ++ N LTG IP  L  +S L  ++ SSN     IP+
Sbjct:  133 LDLSSCSVNGVVPFTLGNLTSLRTLNLSQNSLTSLVPSSLGQLLNLSQLDLSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPS 242          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.276e-12
Identity = 57/166 (34.34%), Postives = 76/166 (45.78%), Query Frame = -1
Query:  355 PCTWFHITCNQDNRVTRLDL-------------GN-----------SNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENN 780
            PCTW  + C +  RVT L L             GN           + L+G L P+   L  L+YL L  N   G IP  L  L ++I ++L  NN  G+IP ++     L  L L DN+LTG IP   +    L+  +VSSN L G+IP   P   +P   F  N
Sbjct:   52 PCTWGGVQC-ESGRVTALRLPGVGLSGPLPIAIGNLTKLETLSFRFNALNGPLPPDFANLTLLRYLYLQGNAFSGEIPSFLFTLPNIIRINLAQNNFLGRIPDNVNSATRLATLYLQDNQLTGPIPEIKI---KLQQFNVSSNQLNGSIP--DPLSGMPKTAFLGN 211          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.279e-12
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = -1
Query:  403 TCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 759
            T  + +++  LDL  + ++  L  +L  L  L+ L L  N I   +P  +GN  SL +LDL  N+ISGKIP +++ L +L  L+L++N     +P ELV   SL  +D+SSN L  ++P
Sbjct:   85 TIGKMSKLQTLDLSGNKITS-LPSDLWSLSLLESLNLSSNRISEPLPSNIGNFMSLHTLDLSFNSISGKIPAAISNLVNLTTLKLHNNDFQFGVPPELVHCRSLLSIDLSSNRLNESLP 202          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.279e-12
Identity = 53/169 (31.36%), Postives = 76/169 (44.97%), Query Frame = -1
Query:  340 CTWFHITCNQDNRVTRLDLGNSNLSGRLVPE-LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGI----------------------SSLKVVDVSSNDLCGTIPTSGPFEHIPLNNFENNPRLEG 777
            C W  + C Q  R+ RL L    L G      L +L+ L+ L L  N++ G IP +L +L +L SL L  N  SG  PPS+  L  L+ L ++ N  +G IP E+  +                      S L   +VS N+L G IP +        ++F +NP L G
Sbjct:   62 CQWRGVKCAQ-GRIVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIP-DLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPSLNQSFLTSFNVSGNNLTGVIPVTPTLSRFDASSFRSNPGLCG 228          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.588e-12
Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = -1
Query:  403 TCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 759
            T  + +++  LDL N+ +S  L  +   L  L+ L L  N I G+    +GN   L  LD+  NN SG IP ++  L SL  L+L+ N     IPR L+G  SL  +D+SSN L G++P
Sbjct:   87 TIGKLSKLQSLDLSNNKISA-LPSDFWSLNTLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAVDSLVSLRVLKLDHNGFQMSIPRGLLGCQSLVSIDLSSNQLEGSLP 204          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.588e-12
Identity = 49/154 (31.82%), Postives = 84/154 (54.55%), Query Frame = -1
Query:  286 LGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS----GPFEHIPLNNFENNPRLEGPELLGLASYDT----NCS*TID 723
            LGN  L+G +  E G +  L  L L  N + G +P+ELGNL ++  + L +NN +G+IP + AKL +L   R++DN+L+G IP  +   + L+ + + ++ L G IP +       + + +++  N P    P+L  +   +T    NC+ T D
Sbjct:  118 LGN-RLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIPDFIQKWTKLERLFIQASGLVGPIPIAIASLVELKDLRISDL-NGPESPFPQLRNIKKMETLILRNCNLTGD 269          

HSP 2 Score: 70.8626 bits (172), Expect = 9.533e-12
Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = -1
Query:  403 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 729
            +DL  + L+G + PE G L  L  + L  N + G IP E GN+ +L SL L  N +SG++P  L  L ++  + L+ N   G+IP     +++L+   VS N L GTIP
Sbjct:   92 IDLSRNYLNGSIPPEWGVLP-LVNIWLLGNRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIP 199          

HSP 3 Score: 69.707 bits (169), Expect = 2.124e-11
Identity = 45/130 (34.62%), Postives = 76/130 (58.46%), Query Frame = -1
Query:  397 VNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 786
            V+PC     T N+ + ++R +L   NL G L  EL  L  LQ ++L +N + G+IP E G L  L+++ L  N ++G IP     + +L  L L  N+L+G++P EL  + +++ + +SSN+  G IP++
Sbjct:   51 VDPCE-VSSTGNEWSTISR-NLKRENLQGSLPKELVGLPLLQEIDLSRNYLNGSIPPEWGVLP-LVNIWLLGNRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPST 177          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.533e-12
Identity = 37/98 (37.76%), Postives = 56/98 (57.14%), Query Frame = -1
Query:  520 DPTLVNPCTWFHITCNQDN-----RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL 798
            DP L     W  + C+  N     R+  LDL +  L+G++VP++  L  LQ L+L  N + G +P  L N+KSL+ ++L NNN+ G IP +L   K+L
Sbjct:  391 DPCLPQQFLWTGLNCSYMNMSTSPRIISLDLSSHKLTGKIVPDIQNLTQLQKLDLSNNKLTGGVPEFLANMKSLLFINLSNNNLVGSIPQALLDRKNL 488          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.245e-11
Identity = 44/131 (33.59%), Postives = 75/131 (57.25%), Query Frame = -1
Query:  397 NPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 783
            +PC  +W  ITC + + V  +D+ +  +SG L   L  L+ L+ L++  N+I  T+P +L    +L SL+L  NN+SG +P S++ + SL ++ ++ N LT  I        SL  +D+S N+  G +P+S
Sbjct:   59 DPCGESWKGITC-EGSAVVTIDISDLGVSGTLGYLLSDLKSLRKLDVSGNSIHDTLPYQLP--PNLTSLNLARNNLSGNLPYSISAMGSLSYMNVSGNSLTMSIGDIFADHKSLATLDLSHNNFSGDLPSS 186          

HSP 2 Score: 68.5514 bits (166), Expect = 4.731e-11
Identity = 46/141 (32.62%), Postives = 77/141 (54.61%), Query Frame = -1
Query:  325 VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHIPL---NNFENNPRLEGPELLG 738
            +T L+L  +NLSG L   +  +  L Y+ +  N++  +I     + KSL +LDL +NN SG +P SL+ + +L  L + +N+LTG I  +++    LK ++V++N   G+IP         +   N+F+N P    PE  G
Sbjct:  121 LTSLNLARNNLSGNLPYSISAMGSLSYMNVSGNSLTMSIGDIFADHKSLATLDLSHNNFSGDLPSSLSTVSTLSVLYVQNNQLTGSI--DVLSGLPLKTLNVANNHFNGSIPKELSSIQTLIYDGNSFDNVPASPQPERPG 259          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: PII2_ARATH (Piriformospora indica-insensitive protein 2 OS=Arabidopsis thaliana GN=PII-2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.245e-11
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = -1
Query:  409 CNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSN-----DLCGT 756
            CN   R+ RL    ++ +G +      L+ L  L+L +N+  GT+P   G+L SL+ LDL NN + G +P  L  LK+L  L L +NR +G + + +  I SL  + +S+N     D+ GT
Sbjct:  188 CNL-KRLKRLVFAGNSFAGMIPNCFKGLKELLILDLSRNSFSGTLPTSFGDLVSLLKLDLSNNLLEGNLPQELGFLKNLTLLDLRNNRFSGGLSKNIENIQSLTELVLSNNPMGEEDMVGT 307          
BLAST of CF835527 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.124e-11
Identity = 35/98 (35.71%), Postives = 55/98 (56.12%), Query Frame = -1
Query:  520 DPTLVNPCTWFHITCNQDNR-----VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSL 798
            DP +     W  + C   +      +T LDL +S L+G +   +  L HLQ L+L  NN+ G +P  L ++KSL+ ++L  NN+SG +PPSL + K +
Sbjct:  379 DPCVPKQLLWDGLNCKNSDISTPPIITSLDLSSSGLTGIITQAIKNLTHLQILDLSDNNLTGEVPEFLADIKSLLVINLSGNNLSGSVPPSLLQKKGM 476          
The following BLAST results are available for this feature:
BLAST of CF835527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
Y2165_ARATH1.921e-1235.45Probable LRR receptor-like serine/threonine-protei... [more]
Y5659_ARATH3.276e-1234.34Probable inactive receptor kinase At5g16590 OS=Ara... [more]
Y5815_ARATH4.279e-1236.97Probably inactive leucine-rich repeat receptor-lik... [more]
Y5720_ARATH4.279e-1231.36Probable inactive receptor kinase At5g67200 OS=Ara... [more]
Y2242_ARATH5.588e-1237.82Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH5.588e-1231.82Probable LRR receptor-like serine/threonine-protei... [more]
Y5169_ARATH9.533e-1237.76Probable LRR receptor-like serine/threonine-protei... [more]
SRF8_ARATH1.245e-1133.59Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
PII2_ARATH1.245e-1134.71Piriformospora indica-insensitive protein 2 OS=Ara... [more]
Y5182_ARATH2.124e-1135.71Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01G13_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835527 ID=CF835527; Name=CF835527; organism=Citrus sinensis; type=EST; length=798bp
TTTTTTTTACCATTTGACACATTTAATACTTTTTATCCGTAACTCTCATA
GATGGAATAGAAAACACTTGGCTAGTATTGTATTACATCTAAAATTCTCA
TCTTGAAAGTTGAAACATTTTTATGAAGATCACAACGACGCTATTACAGA
TGCATTTAAGCAGTATAATACAATTTACATATATGATGGCTTCATTTCAC
CAATAACACTACGCTTTTTAGGTAAAGACGCTTTCGATCTTCGCGGACAC
ATCTATTCGAAACCTGAGTAGAGCTTGAAGCAACAATCAATCGTTTATGA
GCAGTTTGTGTCATAACTTGCAAGTCCCAGCAACTCTGGACCTTCTAATC
GAGGGTTATTCTCAAAGTTGTTGAGTGGGATGTGTTCAAATGGTCCGCTT
GTAGGAATTGTTCCACACAGATCATTGCTTGAAACATCCACAACTTTGAG
ACTTGAAATTCCAACAAGTTCCCTGGGAATTTGTCCAGTTAGCCGATTAT
CGTTAAGCCGCAAAAAAACAAGAGATTTCAATTTAGCCAAGGAAGGAGGG
ATTTTCCCCGAGATGTTGTTATTATACAAGTCCAAGCTGATGAGGCTCTT
CAAGTTACCGAGCTCGACAGGGATAGTTCCTTGGATGTTGTTTTTGTAAA
GTTCCAGGTATTGCAAATGCTCGAGCTTGCCCAGTTCAGGGACGAGACGG
CCGGATAGATTTGAATTACCCAAATCCAGTCGAGTAACGCGGTTGTCCTG
ATTACAGGTTATGTGAAACCAAGTGCAGGGATTGACGAGAGTTGGATC
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