CF835528
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835528 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.381e-11 Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = 2 Query: 281 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 613 L L ++ LSG++ + L HL+ L L N G P L +LI LD+ +NN +G IP S+ L L L L +N +G +P +G+ +VS+N+L G+IP+S Sbjct: 96 LSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGFSGNLPSISLGLVDF---NVSNNNLNGSIPSS 203
BLAST of CF835528 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.381e-11 Identity = 51/160 (31.87%), Postives = 78/160 (48.75%), Query Frame = 2 Query: 143 SEGDALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPE-LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 613 S+ AL L + P + Q W +PC W +TC+ +RVT++ L LSG L L KL L L+L NN+ G +P + +L L+L NN +G SL+++ L +L L N+ GQI + + SL +D S N ++P + Sbjct: 30 SDTSALNTLFSGMHSPAQLTQ-WTAAAGDPCGQNWRGVTCS-GSRVTQIKLSGLELSGTLGGYMLDKLTSLTELDLSSNNLGGDLPYQFP--PNLQRLNLANNQFTGAASYSLSQITPLKYLNLGHNQFKGQIAIDFSKLDSLTTLDFSFNSFTNSLPAT 185
BLAST of CF835528 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11 Identity = 49/151 (32.45%), Postives = 71/151 (47.02%), Query Frame = 2 Query: 245 HITC-------NQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVE-----------LGN------------LKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 607 +ITC N V R+ L + NL+G + PE KL HL+ L+L +N++ G+IP E +GN L L +L L N SG IPP + +L L L L N TG + +L + +L + +S N+ G IP Sbjct: 76 NITCDCSFLPQNSSCHVIRIALKSQNLTGIVPPEFSKLRHLKVLDLSRNSLTGSIPKEWASMRLEDLSFMGNRLSGPFPKVLTRLTMLRNLSLEGNQFSGPIPPDIGQLVHLEKLHLPSNAFTGPLTEKLGLLKNLTDMRISDNNFTGPIP 226
BLAST of CF835528 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11 Identity = 44/131 (33.59%), Postives = 69/131 (52.67%), Query Frame = 2 Query: 227 NPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 613 +PC W + C+ N +T + + + G L L +Q ++ N+I GTIP L + S+ +L L +N +G IP +L+ L L L L N L+G+IP +S L +D+SSN L G +P+S Sbjct: 55 DPCGEKWQGVVCDSSN-ITEIRIPGMKVGGGLSDTLADFSSIQVMDFSSNHISGTIPQALPS--SIRNLSLSSNRFTGNIPFTLSFLSDLSELSLGSNLLSGEIPDYFQQLSKLTKLDLSSNILEGHLPSS 182 The following BLAST results are available for this feature:
BLAST of CF835528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 114
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835528 ID=CF835528; Name=CF835528; organism=Citrus sinensis; type=EST; length=633bpback to top |