CF835542

Overview
NameCF835542
Unique NameCF835542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 3.916e-43
Identity = 75/138 (54.35%), Postives = 101/138 (73.19%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRL-NDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQS 411
            E+D+Y+ DPW LP +A FG +EWYFF+PRDRKYPNG+RPNRA  SGYWKATG DK +    +  G+KKALVFY G+PP+G+KT+WIMHEYRL            G+++LDDWVLCR+Y K+    +  + ++ EE+++
Sbjct:   51 ELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNEWEK--MQSRKEEEEA 186          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.104e-37
Identity = 71/129 (55.04%), Postives = 92/129 (71.32%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG--GSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRL-----NDPTRQPYKHNGSMKLDDWVLCRIYKKRQT 366
            ++DIYK+DPW LP+ A  GEKEWYF+ PRDRKY N +RPNR T +G+WKATGTD+ IY   G+K +G+KK+LVFYKGR  KG+KTDW+MHE+RL       P  + +  +     D W +CRI+KK  T
Sbjct:   50 QLDIYKYDPWDLPKFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKKTNT 178          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.458e-37
Identity = 70/127 (55.12%), Postives = 94/127 (74.02%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY--GGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 375
            EVD+ + +PW+LPE A+ GE+EWYF+S RDRKYP G R NRAT +GYWKATG DK ++  GG + +G+KK LVFYKGR P+G+KT W+MHEYRL +     + H  + K ++WV+CR++ K  TG R
Sbjct:   56 EVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLEN----DHSHRHTCK-EEWVICRVFNK--TGDR 175          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.220e-36
Identity = 72/138 (52.17%), Postives = 93/138 (67.39%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG--GSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRL--------------NDPTRQPYKHNGSMKL---DDWVLCRIYKK 357
            +VDIYK+DPW LP+ A  GEKEWYF+ PRDRKY N TRPNR T  G+WKATGTD+ IY    ++ +G+KK+LVFY+GR  KG+KTDW+MHE+RL              N+  +    +N S +L   D W +CRI+KK
Sbjct:   54 KVDIYKYDPWDLPKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWAICRIFKK 191          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 1.762e-35
Identity = 74/160 (46.25%), Postives = 103/160 (64.38%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAI-----------YGGS-----KYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKL---DDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQ 423
            EVD+ K +PW LP KA+ GEKEWYFFS +D KYP G R NRAT  GYWKATG D+ I           YGGS     + +G+KK LVFY GR PKG KT+W+MHE+RL+      + H+ +++L   D+WV+C+++ K+Q G  ++ + + +   + VDQ
Sbjct:   53 EVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLH---ANLHNHHPNLRLNPKDEWVVCKVFHKKQ-GDEAINNQQQQPQYAAVDQ 208          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 3.005e-35
Identity = 71/145 (48.97%), Postives = 92/145 (63.45%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKE---WYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQL 426
            ++D+YK +PW L E  + G +E   WYFFS +D+KYP GTR NRAT +G+WKATG DKAIY     +G++K LVFYKGR P G K+DWIMHEYRL          NG+ + + WV+CR++KKR    R + D          DQL
Sbjct:   41 DIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLET------DENGTPQEEGWVVCRVFKKRLAAVRRMGDYDSSPSHWYDDQL 179          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.005e-35
Identity = 71/127 (55.91%), Postives = 88/127 (69.29%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGG--SKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 375
            +VD+ K +PW+LPEKA+ GEKEWYFF+ RDRKYP G R NRAT +GYWKATG D+ I        LG+KK LVFYKGR PKG K+ W+MHEYRL+   +  Y +  S   D+WVLC++  K    SR
Sbjct:   54 QVDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRLDG--KFSYHYISSSAKDEWVLCKVCLKSGVVSR 178          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.142e-34
Identity = 64/123 (52.03%), Postives = 85/123 (69.11%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTG 369
            +VD+ K +PW +P+ A  G K+WYF+S RDRKY  G R NRAT +GYWKATG D+ I    K +G++K LVFY+GR P+G KTDW+MHE+RL   +  P  H+ S   +DWVLCR++ K   G
Sbjct:   54 QVDLNKCEPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQG-SHHPPNHSLSSPKEDWVLCRVFHKNTEG 175          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.948e-34
Identity = 68/126 (53.97%), Postives = 86/126 (68.25%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGS--KYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGS 372
            EVD+ K +PWQLP +A+ GEKEWYFFS RDRKYP G R NRAT +GYWKATG D+ I+       +G+KK LVFYKGR PKG K++W+MHEYRL    +  Y        D+WV+ R+++K    S
Sbjct:   51 EVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEG--KFSYHFISRSSKDEWVISRVFQKTTLAS 174          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.813e-33
Identity = 62/119 (52.10%), Postives = 81/119 (68.07%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKK 357
            ++DIYK+DPW LP  +  GEKEWYFF  R RKY N  RPNR T SG+WKATG DK +Y     +G+KK+LV+Y G   KG KTDW+MHE+RL   T+     + + + + W LCRI+K+
Sbjct:   52 QIDIYKYDPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTK---TDSPAQQAEVWTLCRIFKR 167          
The following BLAST results are available for this feature:
BLAST of CF835542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC67_ORYSJ3.916e-4354.35NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC9_ARATH1.104e-3755.04Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC31_ARATH2.458e-3755.12Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC94_ARATH1.220e-3652.17Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC77_ORYSJ1.762e-3546.25NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC7_ARATH3.005e-3548.97NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC54_ARATH3.005e-3555.91Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC22_ARATH1.142e-3452.03NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC98_ARATH1.948e-3453.97Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC42_ARATH2.813e-3352.10NAC domain-containing protein 42 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01H01_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835542 ID=CF835542; Name=CF835542; organism=Citrus sinensis; type=EST; length=490bp
GAAGTGGATATTTACAAGTTTGACCCCTGGCAACTTCCTGAGAAAGCTGA
ATTCGGGGAGAAGGAATGGTACTTTTTCAGCCCACGAGACAGGAAGTATC
CCAATGGGACGAGGCCTAACAGGGCAACTGTATCGGGATATTGGAAGGCC
ACGGGGACTGATAAGGCAATATATGGTGGGTCTAAATATCTTGGTGTCAA
GAAAGCTCTTGTTTTTTATAAGGGCAGGCCCCCCAAGGGGATCAAGACTG
ATTGGATCATGCATGAATATCGGCTAAATGACCCAACAAGACAACCCTAC
AAACATAATGGTTCCATGAAACTGGATGATTGGGTACTTTGTAGGATTTA
CAAAAAGAGGCAAACGGGATCAAGATCAGTTTTGGATGCAAAAGTCGAGG
AAGATCAATCATGTGTTGATCAATTACGCAAAACAGGAGGCTATGTTGAG
CATGCTAATGCTAGTGATGAACAGAAATTGATGGTGAAAT
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