CF835542

Overview
NameCF835542
Unique NameCF835542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.069e-32
Identity = 65/132 (49.24%), Postives = 86/132 (65.15%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFG---EKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHN--------GSMKLDD-WVLCRIYKKR 360
            +VD+ K +PW + E  + G   + +WYFFS +D+KYP GTR NRAT +G+WKATG DK IY   + +G++K LVFYKGR P G K+DWIMHEYRL+D    P            G    D+ WV+CRI+KK+
Sbjct:   50 DVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKK 181          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.110e-32
Identity = 64/133 (48.12%), Postives = 87/133 (65.41%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFG---EKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDP----------TRQPYKHNGSMKLDDWVLCRIYKKR 360
            EVD+ K +PW + E+   G   + +WYFFS +D+KYP GTR NRATV+G+WKATG DK I    + +G++K LVFYKGR P G K+DWIMHEYRL+D           T  P  +N     + WV+CR+++K+
Sbjct:   50 EVDLNKLEPWDIQEECRIGSTPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNE----EGWVVCRVFRKK 178          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 6.928e-32
Identity = 67/141 (47.52%), Postives = 92/141 (65.25%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFG---EKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY-GGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKR--QTGSRSVLDAKVEED 405
            E+D+ K +PW L ++   G   + EWYFFS +D+KYP GTR NRAT +G+WKATG DKAI+   +  +G++K LVFY GR P G KTDWIMHEYRL+       + N  ++ D WV+CR++ K+  Q G      A V++D
Sbjct:   44 EIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYRLD-------QDNVDVQEDGWVVCRVFMKKSYQRGLNPADMAAVDDD 177          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 6.928e-32
Identity = 66/121 (54.55%), Postives = 87/121 (71.90%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFG--EKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKK 357
            EVDIYK +PW LP K +    + +W+FF+ RDRKYPNG+R NRATV+GYWK+TG D+AI  G + +G KK LVF++GRPP G +T+WIMHEY +++   Q       MK D +VLCRI K+
Sbjct:   43 EVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYIDERECQACP---DMK-DAYVLCRITKR 159          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.182e-31
Identity = 61/126 (48.41%), Postives = 88/126 (69.84%), Query Frame = 1
Query:    7 DIYKFDPWQLPEKAEFGEK--EWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRS 378
            DIYK +PW LP+K++   +  EWYFFS  D+KY NG++ NRAT  GYWK TG D+ I  GS+ +G+KK LV++KGR P+G +T+W+MHEYRL+D   +       +  + +VLCRI++K  TG ++
Sbjct:   45 DIYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSDEDLK----KAGVPQEAYVLCRIFQKSGTGPKN 166          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 3.802e-30
Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFG---EKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPT--RQPYKHNGSMKLDD-------WVLCRIYKK 357
            ++D+ K +PW + E  + G   + +WYF+S +D+KYP GTR NRAT  G+WKATG DK IY     +G++K LVFYKGR P G K+DWIMHEYRL++         H+ +++  D       WV+CR++KK
Sbjct:   45 DIDLNKLEPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKK 175          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.657e-17
Identity = 52/138 (37.68%), Postives = 75/138 (54.35%), Query Frame = 1
Query:    4 VDIYKFDPWQLPEKAEF----GEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-GSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKL-DDWVLCRIYKKRQTGSRSVLDAKVE 399
            +D+++ +P  LP  A        ++W+FF PR  +   G RP+R T SGYWKATG+   ++   +K +G KK +VFY G+ P G KT W M+EY   D T      +   KL  ++ LCR+Y    TGS    D + E
Sbjct:   42 LDVFEVEPSHLPNVAGVRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVDET---VNASTIPKLRREFSLCRVY--ITTGSSRAFDRRPE 174          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.826e-17
Identity = 48/128 (37.50%), Postives = 69/128 (53.91%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPE--KAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY---GGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTG 369
            E++I  +DP  LP   K +  +  WYFF P++          R T SGYWKATG D+ I    G    +G+KK LV+Y+GR PKG+ T W+MHEY +   T  P          ++V+C++  K + G
Sbjct:   39 EINICSYDPIYLPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEYHI---TCLPQDQR------NYVICQVMYKGEDG 157          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.295e-17
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 1
Query:    4 VDIYKFDPWQLP----EKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYG-GSKYLGVKKALVFYKGRPPKGIKTDWIMHEYR 273
            +D++  +P QLP    E+     ++W FF PR  +   G RP+R T SGYWKATG+   ++   ++ +GVKK +VFY G+ P G KT W M+EY+
Sbjct:   41 LDVFSVEPTQLPNLAGERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGRKTKWKMNEYK 135          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.187e-15
Identity = 53/156 (33.97%), Postives = 82/156 (52.56%), Query Frame = 1
Query:    4 VDIYKFDPWQLPEKAEFGEKE--WYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY---GGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSM---KLDDWVLCRI-YKKRQTG-SRSVLDAKVEEDQSCVDQLRKTGG 441
            VDI  F+PW LP K+    ++  WYFFS ++ KY  G +  R T SG+WK TG    +    G  + +G K+ LVF K R   G KTDW+MHEY           H  S+   ++  + +C++ +K  +T  S S   +++E+  S +  +  +GG
Sbjct:   40 VDICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVF-KNR--DGSKTDWVMHEY-----------HATSLFPNQMMTYTVCKVEFKGEETEISSSSTGSEIEQIHSLIPLVNSSGG 181          
The following BLAST results are available for this feature:
BLAST of CF835542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC43_ARATH1.069e-3249.24NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC12_ARATH3.110e-3248.12NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC76_ORYSJ6.928e-3247.52NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC74_ORYSJ6.928e-3254.55NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC78_ARATH1.182e-3148.41NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC66_ARATH3.802e-3045.80NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC90_ARATH1.657e-1737.68NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC69_ARATH2.826e-1737.50NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC61_ARATH6.295e-1742.11Putative NAC domain-containing protein 61 OS=Arabi... [more]
NAC4_ARATH1.187e-1533.97NAC domain-containing protein 4 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01H01_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835542 ID=CF835542; Name=CF835542; organism=Citrus sinensis; type=EST; length=490bp
GAAGTGGATATTTACAAGTTTGACCCCTGGCAACTTCCTGAGAAAGCTGA
ATTCGGGGAGAAGGAATGGTACTTTTTCAGCCCACGAGACAGGAAGTATC
CCAATGGGACGAGGCCTAACAGGGCAACTGTATCGGGATATTGGAAGGCC
ACGGGGACTGATAAGGCAATATATGGTGGGTCTAAATATCTTGGTGTCAA
GAAAGCTCTTGTTTTTTATAAGGGCAGGCCCCCCAAGGGGATCAAGACTG
ATTGGATCATGCATGAATATCGGCTAAATGACCCAACAAGACAACCCTAC
AAACATAATGGTTCCATGAAACTGGATGATTGGGTACTTTGTAGGATTTA
CAAAAAGAGGCAAACGGGATCAAGATCAGTTTTGGATGCAAAAGTCGAGG
AAGATCAATCATGTGTTGATCAATTACGCAAAACAGGAGGCTATGTTGAG
CATGCTAATGCTAGTGATGAACAGAAATTGATGGTGAAAT
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