CF835549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835549 vs. ExPASy Swiss-Prot
Match: GBLP_CAEEL (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Caenorhabditis elegans GN=rack-1 PE=1 SV=3) HSP 1 Score: 174.866 bits (442), Expect = 3.537e-43 Identity = 85/149 (57.05%), Postives = 100/149 (67.11%), Query Frame = -2 Query: 233 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 679 KVWNL NC+L+ GHTGYVNTV VSPDGSLCASGGKDG +LWDL EGK LY+L VI+A+ FSPNRYWLCAA SIKIWDLE K +E+LK ++ + C SL WS DG TLF+GYTD +IRV+ + Sbjct: 181 KVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELKPEI----------ASSGSSRGSSPQCISLAWSQDGQTLFAGYTDNIIRVYQV 319
BLAST of CF835549 vs. ExPASy Swiss-Prot
Match: GBLP_DROME (Guanine nucleotide-binding protein subunit beta-like protein OS=Drosophila melanogaster GN=Rack1 PE=2 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 3.311e-41 Identity = 81/149 (54.36%), Postives = 96/149 (64.43%), Query Frame = -2 Query: 233 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 679 KVWNL+NCKL+ GH GY+NTV VSPDGSLC SGGKD LLWDL +GK LY+L+ +I+ALCFSPNRYWLC A SIKIWDL K VE+L+ ++ C SL WS DG TLF+GY+D IRVW + Sbjct: 176 KVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQP-----------QCLSLAWSTDGQTLFAGYSDNTIRVWQV 313
BLAST of CF835549 vs. ExPASy Swiss-Prot
Match: GBLP_SCHPO (Guanine nucleotide-binding protein subunit beta-like protein OS=Schizosaccharomyces pombe GN=rkp1 PE=1 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 6.903e-39 Identity = 80/149 (53.69%), Postives = 98/149 (65.77%), Query Frame = -2 Query: 233 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 679 KVW+L LR + GHTGYV+ V +SPDGSLCASGG+DG ++LWDL E LYSL+A A I+AL FSPNRYWLCAAT SI+I+DLE++ V++L VD C SL WS DG TLFSG+TD +IRVW + Sbjct: 175 KVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVFSPNRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPE-----------CISLTWSPDGQTLFSGWTDNLIRVWQV 312
BLAST of CF835549 vs. ExPASy Swiss-Prot
Match: GBLP_TRYBR (Guanine nucleotide-binding protein subunit beta-like protein OS=Trypanosoma brucei rhodesiense PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.633e-38 Identity = 77/149 (51.68%), Postives = 97/149 (65.10%), Query Frame = -2 Query: 233 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 679 KVW+L+ +L L GHT YV +V VSPDGSLCAS KDGV LWDL +G+ L + AGA I+ +CFSPNRYW+CAATE+ I+I+DLE+K I+ +L + C S+ WS DGSTL+SGYTD VIRVWG+ Sbjct: 179 KVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGAPINQICFSPNRYWMCAATEKGIRIFDLENKDIIVELAPEHQGSKKIVPE-------------CVSIAWSADGSTLYSGYTDNVIRVWGV 314
BLAST of CF835549 vs. ExPASy Swiss-Prot
Match: GBLP_TRYBB (Guanine nucleotide-binding protein subunit beta-like protein OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.633e-38 Identity = 77/149 (51.68%), Postives = 97/149 (65.10%), Query Frame = -2 Query: 233 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 679 KVW+L+ +L L GHT YV +V VSPDGSLCAS KDGV LWDL +G+ L + AGA I+ +CFSPNRYW+CAATE+ I+I+DLE+K I+ +L + C S+ WS DGSTL+SGYTD VIRVWG+ Sbjct: 179 KVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGAPINQICFSPNRYWMCAATEKGIRIFDLENKDIIVELAPEHQGSKKIVPE-------------CVSIAWSADGSTLYSGYTDNVIRVWGV 314
BLAST of CF835549 vs. ExPASy Swiss-Prot
Match: GBLP_LEIIN (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.188e-36 Identity = 71/149 (47.65%), Postives = 99/149 (66.44%), Query Frame = -2 Query: 233 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 679 KVWN++ K TL GH+ YV+TV VSPDGSLCASGGKDG LLWDL+ G++L+ ++ + I+ + FSPNR+W+C ATE+S+ ++DLESK+++ +L D K C S+ WS DG+TL+SG+ D +IRVW I Sbjct: 177 KVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINVESPINQIAFSPNRFWMCVATERSLSVYDLESKAVIAELTPD-----------------GAKPSECISIAWSADGNTLYSGHKDNLIRVWSI 308
BLAST of CF835549 vs. ExPASy Swiss-Prot
Match: GBLP_LEICH (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania chagasi PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.188e-36 Identity = 71/149 (47.65%), Postives = 99/149 (66.44%), Query Frame = -2 Query: 233 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 679 KVWN++ K TL GH+ YV+TV VSPDGSLCASGGKDG LLWDL+ G++L+ ++ + I+ + FSPNR+W+C ATE+S+ ++DLESK+++ +L D K C S+ WS DG+TL+SG+ D +IRVW I Sbjct: 177 KVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINVESPINQIAFSPNRFWMCVATERSLSVYDLESKAVIAELTPD-----------------GAKPSECISIAWSADGNTLYSGHKDNLIRVWSI 308
BLAST of CF835549 vs. ExPASy Swiss-Prot
Match: GBLP_LEIMA (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania major PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.330e-36 Identity = 71/149 (47.65%), Postives = 99/149 (66.44%), Query Frame = -2 Query: 233 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 679 KVWN++ K TL GH+ YV+TV VSPDGSLCASGGKDG LLWDL+ G++L+ ++ + I+ + FSPNR+W+C ATE+S+ ++DLESK+++ +L D K C S+ WS DG+TL+SG+ D +IRVW I Sbjct: 177 KVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINVESPINQIGFSPNRFWMCVATERSLSVYDLESKAVIAELTPD-----------------GAKPSECISIAWSADGNTLYSGHKDNLIRVWSI 308
BLAST of CF835549 vs. ExPASy Swiss-Prot
Match: GBLP_DICDI (Guanine nucleotide-binding protein subunit beta-like protein OS=Dictyostelium discoideum GN=gpbB PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 5.120e-34 Identity = 70/147 (47.62%), Postives = 92/147 (62.59%), Query Frame = -2 Query: 239 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 679 K+W++ + K TL HTGYVNTV +SPDGSLCASGGKD LW+L+ GK LY L+A I+AL FSPN+YWL AAT+ I IWDL +K ++ ++ ++ C SL WS DGS L++GY DG+IRV+ Sbjct: 181 KIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSPNKYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQAFDSKKKKESKPKAPA---CLSLAWSADGSVLYAGYNDGLIRVY 324
BLAST of CF835549 vs. ExPASy Swiss-Prot
Match: GBLP_YEAST (Guanine nucleotide-binding protein subunit beta-like protein OS=Saccharomyces cerevisiae GN=ASC1 PE=1 SV=4) HSP 1 Score: 132.88 bits (333), Expect = 1.542e-30 Identity = 65/149 (43.62%), Postives = 88/149 (59.06%), Query Frame = -2 Query: 233 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 679 K WNL+ ++ A GH +NT+ SPDG+L AS GKDG I+LW+LA K +Y+L A + +L FSPNRYWL AAT IK++ L+ + +V+DL+ + + SL WS DG TLF+GYTD VIRVW + Sbjct: 179 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEP------------HAVSLAWSADGQTLFAGYTDNVIRVWQV 315 The following BLAST results are available for this feature:
BLAST of CF835549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835549 ID=CF835549; Name=CF835549; organism=Citrus sinensis; type=EST; length=680bpback to top |