CF835550

Overview
NameCF835550
Unique NameCF835550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13759 contig Csv1_Contig13759:108..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: PLRG1_BOVIN (Pleiotropic regulator 1 OS=Bos taurus GN=PLRG1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.413e-18
Identity = 68/228 (29.82%), Postives = 103/228 (45.18%), Query Frame = 1
Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHAL 687
            H   V  IA    N    VT S D++I +W L       G  +  LTGH   V+ V++S+   +  S   D +++ WDL   K  R + GH   V  +        +V+ SRD T ++W+     K ++     HT  V+ VR      +P I++ S D T+++W+L   K R TL  H   V  V + P     ASG  D  I  W   +G  + +L    A+I+ L
Sbjct:  202 HLGWVRCIAVEPGNQ-WFVTGSADRTIKIWDLAS-----GKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV--RTKASVHTLSGHTNAVATVRC--QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTL 418          

HSP 2 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 51/175 (29.14%), Postives = 79/175 (45.14%), Query Frame = 1
Query:  136 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            R ++GH  +V+ + +    Q+ ++GS D  +++WDLA GK      GH   V  V  S  +  + S   D+ +K W+   E    I+    H   V  +   P      +V+ S D T ++W++       TL+GHT  V TV          +G  D  I LWDL  GK   +L
Sbjct:  197 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDL--EYNKVIRHYHGHLSAVYGLDLHPTI--DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTL 367          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: YCW2_YEAST (WD repeat-containing protein YCR072C OS=Saccharomyces cerevisiae GN=YCR072C PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18
Identity = 62/195 (31.79%), Postives = 85/195 (43.59%), Query Frame = 1
Query:   43 DNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 627
            ++ +M+VTAS D ++ +W+  K  K       R+TGH   V  V  S DG++ +S S+D  ++LWD  +GK    F GH   V  VA+S D R +VS S+D T+K+W             D  T                                  KL   L GH   V TV  S DG    SGGKD ++ LW
Sbjct:  369 NSEEMMVTASDDYTMFLWNPLKSTKPIA----RMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW-------------DVRTR---------------------------------KLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513          

HSP 2 Score: 82.4185 bits (202), Expect = 2.495e-15
Identity = 61/204 (29.90%), Postives = 100/204 (49.02%), Query Frame = 1
Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKS-ARRFVGHTKDVLSVAFSI-------DNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL-SNCKLRATLAGHTGYVNTVAVSPDGSL 588
            H   +   A     S  +VT + D +  +W    +   +      L GH ++V  V  S DG+   +GS D  +RLWD   G+       GH+K + S+++            ++ S+S+D TIK+W+T+   C+YT+     HT  VSCV++     Q  + S S DRTV+VW++ S  +    L  H  +VN +++S D +L
Sbjct:  142 HGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMH-----TLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTM---SGHTNSVSCVKWGG---QGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYAL 334          

HSP 3 Score: 75.8702 bits (185), Expect = 2.335e-13
Identity = 46/150 (30.67%), Postives = 76/150 (50.67%), Query Frame = 1
Query:  202 LSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTL-----QPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 633
            ++G+ D   R+WD           GH   VL V++S D   I + S D TI+LW+   G+C      G  H++W++ + + P  L     +P + S+S D T+K+W+  +   + T++GHT  V+ V     G L  SG  D  + +WD+
Sbjct:  160 VTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRG--HSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDI 306          

HSP 4 Score: 73.559 bits (179), Expect = 1.159e-12
Identity = 60/213 (28.17%), Postives = 99/213 (46.48%), Query Frame = 1
Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 645
            HT+ V+ +        ++ + S D+++ VW +  + +   +    L  H+H+V  + LS+D    + G++D   +     E    +    + K       S     +V+AS D T+ LWN L   K  I     H + V+ V FSP+     IVSAS+D ++K+W+  + K  +T  GH   V  VA S D  L  S  KD  + +WD+   K
Sbjct:  277 HTNSVSCVKW--GGQGLLYSGSHDRTVRVWDINSQGRCINI----LKSHAHWVNHLSLSTDYALRI-GAFDHTGKKPSTPEEAQKKALENYEKICKKNGNS--EEMMVTASDDYTMFLWNPLKSTK-PIARMTGHQKLVNHVAFSPDGRY--IVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRK 477          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR48_MOUSE (WD repeat-containing protein 48 OS=Mus musculus GN=Wdr48 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18
Identity = 58/199 (29.15%), Postives = 93/199 (46.73%), Query Frame = 1
Query:   58 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-----LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAE 639
            + TA RD  I +W + + ++   +A   +  H+ +V DVVL  +G+  +S S D  +++W+  +G        H   V ++A++ D   + SA  DR I LW+      L     T+          S    + N L   IVS S ++ ++VW+   C     L GHT  V  + +  DG+ C SG  DG I LW L +
Sbjct:   45 LFTAGRDSIIRIWSVNQHKQDPYIAS--MEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGTIRLWSLGQ 241          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR48_DROVI (WD repeat-containing protein 48 homolog OS=Drosophila virilis GN=GJ15009 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18
Identity = 57/210 (27.14%), Postives = 98/210 (46.67%), Query Frame = 1
Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWV-----SCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            N+  + +A RD  I VW+   E     +  + +  H+ +V D+VL  +G+  +S S D  +++W+  +G        H   V ++A++ D  Q+ SA  D+ I LW+       T       T  +     S    + N     IVS S +  +++W+   C     L GHT  V  + VSPDG+   SG  DG I +W+L + + + ++
Sbjct:   39 NNGKLYSAGRDAIIRVWNTRTESNDKYI--QSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAHKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCIQTI 246          

HSP 2 Score: 75.0998 bits (183), Expect = 3.983e-13
Identity = 58/177 (32.77%), Postives = 84/177 (47.46%), Query Frame = 1
Query:    1 RAHTHLVTAIATPIDNSDMIVTASRDKSIIVWH------LTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN 513
            R H   V A+A   D  + + +A  DK+I +W       LT    T  V    LTG    +  + ++  G   +SGS +  LR+WD      + +  GHT++V  +  S D  Q+VS S D TIK+WN LG+ +  IQ    H E V  +  S N     I+S S DR + V  + N
Sbjct:  112 RTHRDYVQALAYAKDR-EQVASAGLDKAIFLWDVNTLTALTASNNT--VTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWN-LGQ-QRCIQTIHVHKEGVWSLLMSENF--QYIISGSRDRNIIVTEMRN 281          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR48_DROGR (WD repeat-containing protein 48 homolog OS=Drosophila grimshawi GN=GH21936 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18
Identity = 57/210 (27.14%), Postives = 98/210 (46.67%), Query Frame = 1
Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWV-----SCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            N+  + +A RD  I VW+   E     +  + +  H+ +V D+VL  +G+  +S S D  +++W+  +G        H   V ++A++ D  Q+ SA  D+ I LW+       T       T  +     S    + N     IVS S +  +++W+   C     L GHT  V  + VSPDG+   SG  DG I +W+L + + + ++
Sbjct:   39 NNGKLYSAGRDAIIRVWNTRTESNEKYI--QSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAHKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCIQTI 246          

HSP 2 Score: 75.0998 bits (183), Expect = 3.983e-13
Identity = 58/177 (32.77%), Postives = 84/177 (47.46%), Query Frame = 1
Query:    1 RAHTHLVTAIATPIDNSDMIVTASRDKSIIVWH------LTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN 513
            R H   V A+A   D  + + +A  DK+I +W       LT    T  V    LTG    +  + ++  G   +SGS +  LR+WD      + +  GHT++V  +  S D  Q+VS S D TIK+WN LG+ +  IQ    H E V  +  S N     I+S S DR + V  + N
Sbjct:  112 RTHRDYVQALAYAKDR-EQVASAGLDKAIFLWDVNTLTALTASNNT--VTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWN-LGQ-QRCIQTIHVHKEGVWSLLMSENF--QYIISGSRDRNIIVTEIRN 281          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR48_DROAN (WD repeat-containing protein 48 homolog OS=Drosophila ananassae GN=GF12420 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18
Identity = 57/203 (28.08%), Postives = 94/203 (46.31%), Query Frame = 1
Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWV-----SCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAE 639
            N+  + +A RD  I VW+   E     +  + +  H+ +V D+VL  +G+  +S S D  +++W+  +G        H   V ++A++ D  Q+ SA  D+ I LW+       T       T  +     S    + N     IVS S +  +++W+   C     L GHT  V  + VSPDG+   SG  DG I +W+L +
Sbjct:   39 NNGKLYSAGRDAIIRVWNTRTESNEKYI--QSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQ 239          

HSP 2 Score: 74.7146 bits (182), Expect = 5.202e-13
Identity = 57/177 (32.20%), Postives = 84/177 (47.46%), Query Frame = 1
Query:    1 RAHTHLVTAIATPIDNSDMIVTASRDKSIIVWH------LTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN 513
            R H   V A+A   D  + + +A  DK+I +W       LT    T  V    LTG    +  + ++  G   +SGS +  LR+WD      + +  GHT++V  +  S D  Q+VS S D TIK+WN LG+ +  +Q    H E V  +  S N     I+S S DR + V  + N
Sbjct:  112 RTHRDYVQALAYAKDR-EQVASAGLDKAIFLWDVNTLTALTASNNT--VTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWN-LGQ-QRCVQTIHVHKEGVWSLLMSENF--QYIISGSRDRNIIVTEMRN 281          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR48_CHICK (WD repeat-containing protein 48 OS=Gallus gallus GN=WDR48 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18
Identity = 56/199 (28.14%), Postives = 94/199 (47.24%), Query Frame = 1
Query:   58 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-----LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAE 639
            + TA RD  I +W + + ++   +A   +  H+ +V D+VL  +G+  +S S D  +++W+  +G        H   V ++A++ D   + SA  DR I LW+      L     T+          S    + N +   IVS S ++ ++VW+   C     L GHT  V  + ++ DG+ C SG  DG I LW L +
Sbjct:   45 LFTAGRDSIIRIWSVNQHKQDPYIAS--MEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQ 241          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: PRP4_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18
Identity = 61/189 (32.28%), Postives = 87/189 (46.03%), Query Frame = 1
Query:   64 TASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 627
            T   D+S  +W L  +E+          GHS  V D+    DG  A +G  D   R+WDL  G+      GH K++  + FS +   I + S D T K+W+     C YTI    AH   V+ V+F P      +++ ++D T K+W         TLAGH G V  + +S DG L A+   D    LW
Sbjct:  339 TTCYDRSWRLWDLEAQEEIL-----HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI---PAHQNLVTGVKFEP-IHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: FBW1A_HUMAN (F-box/WD repeat-containing protein 1A OS=Homo sapiens GN=BTRC PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18
Identity = 67/203 (33.00%), Postives = 100/203 (49.26%), Query Frame = 1
Query:   58 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEG-DAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD 663
            IV+  RD +I +W     +K     +R LTGH+  V  + L  D +  ++GS D  +R+WD+  G+     + H + VL + F+  N  +V+ S+DR+I +W+       T++     H   V+ V F        IVSAS DRT+KVWN S C+   TL GH   +    +     L  SG  D  I LWD+  G  L  L+
Sbjct:  316 IVSGLRDNTIKIW-----DKNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKY----IVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE 503          

HSP 2 Score: 87.0409 bits (214), Expect = 1.013e-16
Identity = 63/204 (30.88%), Postives = 98/204 (48.04%), Query Frame = 1
Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL---------SNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 630
            N+ M+VT S+D+SI VW +     T    RR L GH   V   V+  D ++ +S S D  +++W+ +  +  R   GH + +  + +   +R +VS S D TI+LW+   EC   ++  + H E V C+RF        IVS ++D  +KVW+L         +      TL  H+G V    +  D     S   D  IL+WD
Sbjct:  392 NNGMMVTCSKDRSIAVWDMA--SPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI--ECGACLRVLEGHEELVRCIRFD----NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV--FRLQFDEFQIVSSSHDDTILIWD 581          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR48_DROMO (WD repeat-containing protein 48 homolog OS=Drosophila mojavensis GN=GI19644 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.411e-18
Identity = 57/210 (27.14%), Postives = 98/210 (46.67%), Query Frame = 1
Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWV-----SCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            N+  + +A RD  I VW+   E     +  + +  H+ +V D+VL  +G+  +S S D  +++W+  +G        H   V ++A++ D  Q+ SA  D+ I LW+       T       T  +     S    + N     IVS S +  +++W+   C     L GHT  V  + VSPDG+   SG  DG I +W+L + + + ++
Sbjct:   39 NNGKLYSAGRDAIIRVWNTRTEANEKYI--QSMEHHNDWVNDIVLCCNGRNLISASCDTTVKVWNAHKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNLGQQRCIQTI 246          

HSP 2 Score: 75.0998 bits (183), Expect = 3.983e-13
Identity = 58/177 (32.77%), Postives = 84/177 (47.46%), Query Frame = 1
Query:    1 RAHTHLVTAIATPIDNSDMIVTASRDKSIIVWH------LTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN 513
            R H   V A+A   D  + + +A  DK+I +W       LT    T  V    LTG    +  + ++  G   +SGS +  LR+WD      + +  GHT++V  +  S D  Q+VS S D TIK+WN LG+ +  IQ    H E V  +  S N     I+S S DR + V  + N
Sbjct:  112 RTHRDYVQALAYAKDR-EQVASAGLDKAIFLWDVNTLTALTASNNT--VTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRSMKLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWN-LGQ-QRCIQTIHVHKEGVWSLLMSENF--QYIISGSRDRNIIVTEMRN 281          
The following BLAST results are available for this feature:
BLAST of CF835550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
PLRG1_BOVIN1.413e-1829.82Pleiotropic regulator 1 OS=Bos taurus GN=PLRG1 PE=... [more]
YCW2_YEAST1.846e-1831.79WD repeat-containing protein YCR072C OS=Saccharomy... [more]
WDR48_MOUSE1.846e-1829.15WD repeat-containing protein 48 OS=Mus musculus GN... [more]
WDR48_DROVI1.846e-1827.14WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROGR1.846e-1827.14WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_DROAN1.846e-1828.08WD repeat-containing protein 48 homolog OS=Drosoph... [more]
WDR48_CHICK1.846e-1828.14WD repeat-containing protein 48 OS=Gallus gallus G... [more]
PRP4_MOUSE1.846e-1832.28U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus ... [more]
FBW1A_HUMAN1.846e-1833.00F-box/WD repeat-containing protein 1A OS=Homo sapi... [more]
WDR48_DROMO2.411e-1827.14WD repeat-containing protein 48 homolog OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01H09_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835550 ID=CF835550; Name=CF835550; organism=Citrus sinensis; type=EST; length=694bp
CGCGCCCACACCCACTTGGTGACGGCGATCGCCACCCCAATCGACAACTC
TGACATGATCGTGACGGCCTCGCGTGACAAGTCCATCATTGTCTGGCACC
TCACTAAGGAGGAAAAGACCTACGGCGTTGCGCGCCGTCGTTTGACCGGC
CACTCTCACTTCGTGCAGGACGTCGTCCTCTCCTCGGACGGCCAGTTCGC
TCTCTCCGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGATTTGGCCGAGG
GAAAATCCGCCCGCAGGTTCGTCGGCCACACTAAGGACGTTCTCTCCGTC
GCCTTCTCGATCGACAACCGTCAGATTGTATCGGCCTCTCGTGACCGTAC
GATCAAGTTGTGGAACACGCTCGGCGAGTGCAAGTACACGATTCAAGAGG
GAGACGCTCACACTGAGTGGGTTTCTTGTGTTAGGTTCAGCCCCAACACG
CTTCAGCCCACTATCGTTTCCGCCTCGTGGGACCGTACGGTCAAAGTGTG
GAATTTGAGCAACTGCAAGCTTAGGGCTACTCTTGCCGGGCACACTGGAT
ACGTGAACACCGTCGCAGTGTCGCCGGATGGTTCGTTGTGTGCCAGTGGA
GGGAAAGATGGTGTGATTCTGTTGTGGGATTTGGCTGAGGGAAAAAGACT
CTACTCGCTCGACGCTGGTGCTGTCATTCACGCGCTCTGCTTCA
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