CF835550 | Citrus Genome Database

Overview


Name	CF835550
Unique Name	CF835550
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	694

Libraries


Library Name	Type
Washington Navel Orange Shoot Meristem cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig13759	contig	Csv1_Contig13759:108..801.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: TUP1_DICDI (General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 71/209 (33.97%), Postives = 110/209 (52.63%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVW--HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSA----RRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK----LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 642
            + + + T + DK++ VW  H  K + T+        GH   +  +  SSDG+F +SGS D + ++WD+ +GK A       VG    V SVA S D R + + S D  ++LW+   +  Y ++  + H + V  V FSP+    ++ S S D+++K+W+LS  +     RAT  GH  +V +VA SPDGS   SG KD  +  WD   G
Sbjct:  338 DGNYLATGAEDKTVKVWDIHTKKIQHTF-------YGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDA--QTGYFLERYEGHLDSVYSVAFSPDG--KSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG 535

HSP 2 Score: 101.293 bits (251), Expect = 5.190e-21
Identity = 66/198 (33.33%), Postives = 100/198 (50.51%), Query Frame = 1

Query:   58 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-----ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS---LCASGGKDGVILLW 627
            IV+ S DK   +W + K +  + +    + G  + V  V +S DG+   +GS D  +RLWD   G    R+ GH   V SVAFS D + + S S D+++KLW+  G      C+ T    + H ++V  V FSP+     ++S S DR+V+ W+  N      L GH   V +VA+SP  +   + A+G  D    LW
Sbjct:  384 IVSGSGDKKAKIWDIEKGKCAFTLGNEEV-GPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATF---NGHKDFVLSVAFSPD--GSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24
Identity = 62/177 (35.03%), Postives = 102/177 (57.63%), Query Frame = 1

Query:  133 RRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            R  L GHS  +  V  S +G++  S + D  + +W   +GK  +   GH+ ++  VA+S D+ ++VSAS D+T+KLW+   G+C  T++    H+++V C  F+P +    IVS S+D +VK+W +   K   TL+ H+  ++ V    +GSL  SG  DG+  +WD A G+ L +L
Sbjct:   32 RLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGKCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLK---GHSDFVFCCDFNPPS--NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRTL 203

HSP 2 Score: 96.2857 bits (238), Expect = 1.670e-19
Identity = 64/204 (31.37%), Postives = 101/204 (49.51%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGH-TGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            N + + +++ D  II+W         G  ++ L GHS  + DV  SSD    +S S D  L+LWD+  GK  +   GH+  V    F+  +  IVS S D ++K+W    G+C  T+    AH++ +S V F  N     IVS S+D   ++W+ ++ +   TLA      V+ V  SP+G    +   D  + LWD + G+ L
Sbjct:   50 NGEWLASSAADALIIIWGAYD-----GKCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTL---SAHSDPISAVHFHCN--GSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCL 243

HSP 3 Score: 88.5817 bits (218), Expect = 3.481e-17
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 1

Query:   49 SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLS-VAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLW 627
            S++IV+ S D+S+ +W    E KT G   + L+ HS  +  V    +G   +SGS+DG  R+WD A G+  R         +S V FS + + I++A+ D T+KLW+ + G C  T   G  + ++     FS  T +  +VS S D  V +WNL   ++   L GHT  V + A  P  ++ AS     D  I +W
Sbjct:  135 SNLIVSGSFDESVKIW----EVKT-GKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYT-GHKNEKYCIFASFSV-TGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTENIIASAALENDKTIKIW 324

HSP 4 Score: 70.4774 bits (171), Expect = 9.811e-12
Identity = 43/132 (32.58%), Postives = 74/132 (56.06%), Query Frame = 1

Query:  274 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            GH+  + SV FS +   + S++ D  I +W    G+CK T+     H+  +S V +S ++ +  +VSAS D+T+K+W++ + K   TL GH+ +V     +P  +L  SG  D  + +W++  GK L +L A
Sbjct:   37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGKCKKTLY---GHSLEISDVAWSSDSSR--LVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSA 163

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.724e-24
Identity = 69/213 (32.39%), Postives = 104/213 (48.83%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDAGAV 675
            N   + TAS D  +++W+     + Y     R  GH   V  V  S  G    S S D  +RLW   +      F  HT  V SV FS D + + +AS D++IK+W+   +   Y++     HT WV C +FSP+     IVS S D+T+K+W+ +N +     +   G+ N V  +P G+  AS G D  + +WD+   K L  Y + +G V
Sbjct:   29 NGKQLATASWDTFLMLWNFKPHARAY-----RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR---HTHWVRCAKFSPD--GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV 231

HSP 2 Score: 109.383 bits (272), Expect = 1.906e-23
Identity = 71/209 (33.97%), Postives = 106/209 (50.72%), Query Frame = 1

Query:    1 RAHTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 627
            +AHT  V ++    D    + TAS DKSI VW + ++   Y + R     H+H+V+    S DG+  +S S D  +++WD    +    F         V F+     I SA  D+T+K+W+        +Q    H+  V+C+ F P+     +V+AS D T+K+ +L   +L  TL GHTG V TV+ S  G L ASGG D  +LLW
Sbjct:   99 KAHTAPVRSVDFSADGQ-FLATASEDKSIKVWSMYRQRFLYSLYR-----HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV--RVNKLLQHYQVHSGGVNCISFHPS--DNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297

HSP 3 Score: 101.679 bits (252), Expect = 3.974e-21
Identity = 66/218 (30.28%), Postives = 108/218 (49.54%), Query Frame = 1

Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            H  +VT++     + +++ +ASRD+++ +W   K  K           H+  V+ V  S+DGQF  + S D  +++W +   +       HT  V    FS D R IVS S D+TIK+W+T    K  +        + + V F+P+     I SA  D+TVKVW++   KL      H+G VN ++  P  +   +   DG + + DL EG+ +Y+L
Sbjct:   59 HKDVVTSVQFS-PHGNLLASASRDRTVRLWIPDKRGKF-----SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN--KQCVNNFSDSVGFANFVDFNPS--GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTL 266

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.724e-24
Identity = 69/213 (32.39%), Postives = 104/213 (48.83%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDAGAV 675
            N   + TAS D  +++W+     + Y     R  GH   V  V  S  G    S S D  +RLW   +      F  HT  V SV FS D + + +AS D++IK+W+   +   Y++     HT WV C +FSP+     IVS S D+T+K+W+ +N +     +   G+ N V  +P G+  AS G D  + +WD+   K L  Y + +G V
Sbjct:   29 NGKQLATASWDTFLMLWNFKPHARAY-----RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR---HTHWVRCAKFSPD--GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV 231

HSP 2 Score: 108.227 bits (269), Expect = 4.246e-23
Identity = 70/209 (33.49%), Postives = 106/209 (50.72%), Query Frame = 1

Query:    1 RAHTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 627
            +AHT  V ++    D    + TAS DKSI VW + ++   Y + R     H+H+V+    S DG+  +S S D  +++WD    +    F         V F+     I SA  D+T+K+W+        +Q    H+  V+C+ F P+     +++AS D T+K+ +L   +L  TL GHTG V TV+ S  G L ASGG D  +LLW
Sbjct:   99 KAHTAPVRSVDFSADGQ-FLATASEDKSIKVWSMYRQRFLYSLYR-----HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV--RVNKLLQHYQVHSGGVNCISFHPSGNY--LITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297

HSP 3 Score: 103.99 bits (258), Expect = 8.007e-22
Identity = 67/218 (30.73%), Postives = 109/218 (50.00%), Query Frame = 1

Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            H  +VT++     + +++ +ASRD+++ +W   K  K           H+  V+ V  S+DGQF  + S D  +++W +   +       HT  V    FS D R IVS S D+TIK+W+T    K  +        + + V F+P+     I SA  D+TVKVW++   KL      H+G VN ++  P G+   +   DG + + DL EG+ +Y+L
Sbjct:   59 HKDVVTSVQFS-PHGNLLASASRDRTVRLWIPDKRGKF-----SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN--KQCVNNFSDSVGFANFVDFNPS--GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTL 266

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24
Identity = 68/210 (32.38%), Postives = 106/210 (50.48%), Query Frame = 1

Query:    4 AHTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 633
            AH   V+++     +  ++ T   D  + +W + K           LTGH+  V+ V L++  +  ++GS  G +R+WDL   K  R  +GH  ++ S+ F      + S S+D  IKLW+     K  +     H++ V C+RFSP+     + SA+ D TVK+W+L+  K+ +   GHTG VN V   P+  L ASG  D  I  WDL
Sbjct:   18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS-----LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLRFSPD--GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218

HSP 2 Score: 97.0561 bits (240), Expect = 9.788e-20
Identity = 62/189 (32.80%), Postives = 97/189 (51.32%), Query Frame = 1

Query:   52 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV 615
            ++IV  S+  SI VW L   +       R L GH   +  +     G+F  SGS D  ++LWD+       R+ GH++ V  + FS D + + SA+ D T+KLW+ T G+    + E   HT  V+ V F PN  +  + S S DRT++ W+L   ++ + + G  G V +V  +PDG    SG +D +
Sbjct:   76 ELIVAGSQSGSIRVWDLEAAK-----ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM---MSEFPGHTGPVNVVEFHPN--EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254

HSP 3 Score: 68.9366 bits (167), Expect = 2.855e-11
Identity = 45/173 (26.01%), Postives = 75/173 (43.35%), Query Frame = 1

Query:  136 RRLTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            + +  H+  V  +VL  + G+   +G  D  + LW + +        GHT  V SV  +     IV+ S+  +I++W+   E    ++    H   +  + F P      + S S D  +K+W++          GH+  V  +  SPDG   AS   D  + LWDL  GK +
Sbjct:   14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL--EAAKILRTLMGHKANICSLDFHP--YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24
Identity = 68/210 (32.38%), Postives = 106/210 (50.48%), Query Frame = 1

Query:    4 AHTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 633
            AH   V+++     +  ++ T   D  + +W + K           LTGH+  V+ V L++  +  ++GS  G +R+WDL   K  R  +GH  ++ S+ F      + S S+D  IKLW+     K  +     H++ V C+RFSP+     + SA+ D TVK+W+L+  K+ +   GHTG VN V   P+  L ASG  D  I  WDL
Sbjct:   18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS-----LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLRFSPD--GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218

HSP 2 Score: 97.0561 bits (240), Expect = 9.788e-20
Identity = 62/189 (32.80%), Postives = 97/189 (51.32%), Query Frame = 1

Query:   52 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV 615
            ++IV  S+  SI VW L   +       R L GH   +  +     G+F  SGS D  ++LWD+       R+ GH++ V  + FS D + + SA+ D T+KLW+ T G+    + E   HT  V+ V F PN  +  + S S DRT++ W+L   ++ + + G  G V +V  +PDG    SG +D +
Sbjct:   76 ELIVAGSQSGSIRVWDLEAAK-----ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM---MSEFPGHTGPVNVVEFHPN--EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254

HSP 3 Score: 68.9366 bits (167), Expect = 2.855e-11
Identity = 45/173 (26.01%), Postives = 75/173 (43.35%), Query Frame = 1

Query:  136 RRLTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            + +  H+  V  +VL  + G+   +G  D  + LW + +        GHT  V SV  +     IV+ S+  +I++W+   E    ++    H   +  + F P      + S S D  +K+W++          GH+  V  +  SPDG   AS   D  + LWDL  GK +
Sbjct:   14 QEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL--EAAKILRTLMGHKANICSLDFHP--YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM 182

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 61/174 (35.06%), Postives = 99/174 (56.90%), Query Frame = 1

Query:  142 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            L GH+  V  V  S +G++  S S D  +++W   +GK  +   GH   +  VA+S D+  +VSAS D+T+K+W+ + G+C  T++    H+ +V C  F+P +    IVS S+D +V++W++   K   TL  H+  V+ V  + DGSL  S   DG+  +WD A G+ L +L
Sbjct:   41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK---GHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209

HSP 2 Score: 96.6709 bits (239), Expect = 1.278e-19
Identity = 67/219 (30.59%), Postives = 113/219 (51.60%), Query Frame = 1

Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVW--HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK-LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            HT  V+++     N + + ++S DK I +W  +  K EKT       ++GH   + DV  SSD    +S S D  L++WD++ GK  +   GH+  V    F+  +  IVS S D ++++W+   G+C  T+    AH++ VS V F  N     IVS+S+D   ++W+ ++ + L+  +      V+ V  SP+G    +   D  + LWD ++GK L
Sbjct:   44 HTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKT-------ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL---PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249

HSP 3 Score: 89.3521 bits (220), Expect = 2.041e-17
Identity = 70/240 (29.17%), Postives = 107/240 (44.58%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPN-------TLQPT------------------------------------IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLW 627
            +S+++V+AS DK++ +W ++      G   + L GHS++V     +      +SGS+D  +R+WD+  GK  +    H+  V +V F+ D   IVS+S D   ++W+T  G+C  T+ + D     VS V+FSPN       TL  T                                    IVS S D  V +WNL   ++   L GHT  V + A  P  ++ AS     D  I LW
Sbjct:   98 DSNLLVSASDDKTLKIWDVSS-----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

HSP 4 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 1

Query:  274 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            GHTK V SV FS +   + S+S D+ IK+W    G+ + TI     H   +S V +S ++    +VSAS D+T+K+W++S+ K   TL GH+ YV     +P  +L  SG  D  + +WD+  GK L +L A
Sbjct:   43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 61/174 (35.06%), Postives = 99/174 (56.90%), Query Frame = 1

Query:  142 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            L GH+  V  V  S +G++  S S D  +++W   +GK  +   GH   +  VA+S D+  +VSAS D+T+K+W+ + G+C  T++    H+ +V C  F+P +    IVS S+D +V++W++   K   TL  H+  V+ V  + DGSL  S   DG+  +WD A G+ L +L
Sbjct:   41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK---GHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209

HSP 2 Score: 96.6709 bits (239), Expect = 1.278e-19
Identity = 67/219 (30.59%), Postives = 113/219 (51.60%), Query Frame = 1

Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVW--HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK-LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            HT  V+++     N + + ++S DK I +W  +  K EKT       ++GH   + DV  SSD    +S S D  L++WD++ GK  +   GH+  V    F+  +  IVS S D ++++W+   G+C  T+    AH++ VS V F  N     IVS+S+D   ++W+ ++ + L+  +      V+ V  SP+G    +   D  + LWD ++GK L
Sbjct:   44 HTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKT-------ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL---PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249

HSP 3 Score: 89.7373 bits (221), Expect = 1.563e-17
Identity = 70/240 (29.17%), Postives = 107/240 (44.58%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPN-------TLQPT------------------------------------IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLW 627
            +S+++V+AS DK++ +W ++      G   + L GHS++V     +      +SGS+D  +R+WD+  GK  +    H+  V +V F+ D   IVS+S D   ++W+T  G+C  T+ + D     VS V+FSPN       TL  T                                    IVS S D  V +WNL   ++   L GHT  V + A  P  ++ AS     D  I LW
Sbjct:   98 DSNLLVSASDDKTLKIWDVSS-----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

HSP 4 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 1

Query:  274 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            GHTK V SV FS +   + S+S D+ IK+W    G+ + TI     H   +S V +S ++    +VSAS D+T+K+W++S+ K   TL GH+ YV     +P  +L  SG  D  + +WD+  GK L +L A
Sbjct:   43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 61/174 (35.06%), Postives = 99/174 (56.90%), Query Frame = 1

Query:  142 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            L GH+  V  V  S +G++  S S D  +++W   +GK  +   GH   +  VA+S D+  +VSAS D+T+K+W+ + G+C  T++    H+ +V C  F+P +    IVS S+D +V++W++   K   TL  H+  V+ V  + DGSL  S   DG+  +WD A G+ L +L
Sbjct:   41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK---GHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209

HSP 2 Score: 96.6709 bits (239), Expect = 1.278e-19
Identity = 67/219 (30.59%), Postives = 113/219 (51.60%), Query Frame = 1

Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVW--HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK-LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            HT  V+++     N + + ++S DK I +W  +  K EKT       ++GH   + DV  SSD    +S S D  L++WD++ GK  +   GH+  V    F+  +  IVS S D ++++W+   G+C  T+    AH++ VS V F  N     IVS+S+D   ++W+ ++ + L+  +      V+ V  SP+G    +   D  + LWD ++GK L
Sbjct:   44 HTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKT-------ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL---PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249

HSP 3 Score: 89.7373 bits (221), Expect = 1.563e-17
Identity = 70/240 (29.17%), Postives = 107/240 (44.58%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPN-------TLQPT------------------------------------IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLW 627
            +S+++V+AS DK++ +W ++      G   + L GHS++V     +      +SGS+D  +R+WD+  GK  +    H+  V +V F+ D   IVS+S D   ++W+T  G+C  T+ + D     VS V+FSPN       TL  T                                    IVS S D  V +WNL   ++   L GHT  V + A  P  ++ AS     D  I LW
Sbjct:   98 DSNLLVSASDDKTLKIWDVSS-----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

HSP 4 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 1

Query:  274 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            GHTK V SV FS +   + S+S D+ IK+W    G+ + TI     H   +S V +S ++    +VSAS D+T+K+W++S+ K   TL GH+ YV     +P  +L  SG  D  + +WD+  GK L +L A
Sbjct:   43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 61/174 (35.06%), Postives = 99/174 (56.90%), Query Frame = 1

Query:  142 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            L GH+  V  V  S +G++  S S D  +++W   +GK  +   GH   +  VA+S D+  +VSAS D+T+K+W+ + G+C  T++    H+ +V C  F+P +    IVS S+D +V++W++   K   TL  H+  V+ V  + DGSL  S   DG+  +WD A G+ L +L
Sbjct:   41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK---GHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209

HSP 2 Score: 96.6709 bits (239), Expect = 1.278e-19
Identity = 67/219 (30.59%), Postives = 113/219 (51.60%), Query Frame = 1

Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVW--HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK-LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            HT  V+++     N + + ++S DK I +W  +  K EKT       ++GH   + DV  SSD    +S S D  L++WD++ GK  +   GH+  V    F+  +  IVS S D ++++W+   G+C  T+    AH++ VS V F  N     IVS+S+D   ++W+ ++ + L+  +      V+ V  SP+G    +   D  + LWD ++GK L
Sbjct:   44 HTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKT-------ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL---PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249

HSP 3 Score: 89.7373 bits (221), Expect = 1.563e-17
Identity = 70/240 (29.17%), Postives = 107/240 (44.58%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPN-------TLQPT------------------------------------IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLW 627
            +S+++V+AS DK++ +W ++      G   + L GHS++V     +      +SGS+D  +R+WD+  GK  +    H+  V +V F+ D   IVS+S D   ++W+T  G+C  T+ + D     VS V+FSPN       TL  T                                    IVS S D  V +WNL   ++   L GHT  V + A  P  ++ AS     D  I LW
Sbjct:   98 DSNLLVSASDDKTLKIWDVSS-----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

HSP 4 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 1

Query:  274 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            GHTK V SV FS +   + S+S D+ IK+W    G+ + TI     H   +S V +S ++    +VSAS D+T+K+W++S+ K   TL GH+ YV     +P  +L  SG  D  + +WD+  GK L +L A
Sbjct:   43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169

The following BLAST results are available for this feature:

BLAST of CF835550 vs. ExPASy Swiss-Prot

BLAST of CF835550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415


Match Name	E-value	Identity	Description
TUP1_DICDI	7.738e-25	33.97	General transcriptional corepressor tupA OS=Dictyo...	[more]
WDR5B_RAT	1.320e-24	35.03	WD repeat-containing protein 5B OS=Rattus norvegic...	[more]
WD51B_PONAB	1.724e-24	32.39	WD repeat-containing protein 51B OS=Pongo abelii G...	[more]
WD51B_HUMAN	1.724e-24	32.39	WD repeat-containing protein 51B OS=Homo sapiens G...	[more]
KTNB1_MOUSE	2.940e-24	32.38	Katanin p80 WD40-containing subunit B1 OS=Mus musc...	[more]
KTNB1_HUMAN	2.940e-24	32.38	Katanin p80 WD40-containing subunit B1 OS=Homo sap...	[more]
WDR5_XENTR	5.016e-24	35.06	WD repeat-containing protein 5 OS=Xenopus tropical...	[more]
WDR5_RAT	5.016e-24	35.06	WD repeat-containing protein 5 OS=Rattus norvegicu...	[more]
WDR5_MOUSE	5.016e-24	35.06	WD repeat-containing protein 5 OS=Mus musculus GN=...	[more]
WDR5_HUMAN	5.016e-24	35.06	WD repeat-containing protein 5 OS=Homo sapiens GN=...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS03_01H09_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H09, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF835550 ID=CF835550; Name=CF835550; organism=Citrus sinensis; type=EST; length=694bp
CGCGCCCACACCCACTTGGTGACGGCGATCGCCACCCCAATCGACAACTC
TGACATGATCGTGACGGCCTCGCGTGACAAGTCCATCATTGTCTGGCACC
TCACTAAGGAGGAAAAGACCTACGGCGTTGCGCGCCGTCGTTTGACCGGC
CACTCTCACTTCGTGCAGGACGTCGTCCTCTCCTCGGACGGCCAGTTCGC
TCTCTCCGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGATTTGGCCGAGG
GAAAATCCGCCCGCAGGTTCGTCGGCCACACTAAGGACGTTCTCTCCGTC
GCCTTCTCGATCGACAACCGTCAGATTGTATCGGCCTCTCGTGACCGTAC
GATCAAGTTGTGGAACACGCTCGGCGAGTGCAAGTACACGATTCAAGAGG
GAGACGCTCACACTGAGTGGGTTTCTTGTGTTAGGTTCAGCCCCAACACG
CTTCAGCCCACTATCGTTTCCGCCTCGTGGGACCGTACGGTCAAAGTGTG
GAATTTGAGCAACTGCAAGCTTAGGGCTACTCTTGCCGGGCACACTGGAT
ACGTGAACACCGTCGCAGTGTCGCCGGATGGTTCGTTGTGTGCCAGTGGA
GGGAAAGATGGTGTGATTCTGTTGTGGGATTTGGCTGAGGGAAAAAGACT
CTACTCGCTCGACGCTGGTGCTGTCATTCACGCGCTCTGCTTCA