CF835550 | Citrus Genome Database

Overview


Name	CF835550
Unique Name	CF835550
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	694

Libraries


Library Name	Type
Washington Navel Orange Shoot Meristem cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig13759	contig	Csv1_Contig13759:108..801.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 61/174 (35.06%), Postives = 99/174 (56.90%), Query Frame = 1

Query:  142 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            L GH+  V  V  S +G++  S S D  +++W   +GK  +   GH   +  VA+S D+  +VSAS D+T+K+W+ + G+C  T++    H+ +V C  F+P +    IVS S+D +V++W++   K   TL  H+  V+ V  + DGSL  S   DG+  +WD A G+ L +L
Sbjct:   41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK---GHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209

HSP 2 Score: 96.6709 bits (239), Expect = 1.278e-19
Identity = 67/219 (30.59%), Postives = 113/219 (51.60%), Query Frame = 1

Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVW--HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK-LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            HT  V+++     N + + ++S DK I +W  +  K EKT       ++GH   + DV  SSD    +S S D  L++WD++ GK  +   GH+  V    F+  +  IVS S D ++++W+   G+C  T+    AH++ VS V F  N     IVS+S+D   ++W+ ++ + L+  +      V+ V  SP+G    +   D  + LWD ++GK L
Sbjct:   44 HTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKT-------ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL---PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 249

HSP 3 Score: 89.7373 bits (221), Expect = 1.563e-17
Identity = 70/240 (29.17%), Postives = 107/240 (44.58%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPN-------TLQPT------------------------------------IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLW 627
            +S+++V+AS DK++ +W ++      G   + L GHS++V     +      +SGS+D  +R+WD+  GK  +    H+  V +V F+ D   IVS+S D   ++W+T  G+C  T+ + D     VS V+FSPN       TL  T                                    IVS S D  V +WNL   ++   L GHT  V + A  P  ++ AS     D  I LW
Sbjct:   98 DSNLLVSASDDKTLKIWDVSS-----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

HSP 4 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 1

Query:  274 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            GHTK V SV FS +   + S+S D+ IK+W    G+ + TI     H   +S V +S ++    +VSAS D+T+K+W++S+ K   TL GH+ YV     +P  +L  SG  D  + +WD+  GK L +L A
Sbjct:   43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 169

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR5B_MOUSE (WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 66/201 (32.84%), Postives = 112/201 (55.72%), Query Frame = 1

Query:   67 ASRDKSIIVWHLTKEE--KTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            A R +S++     +EE  K     R  L GHS  +  V  S +G++  S + D  + +W   +G   +   GH+ ++  VA+S D+ ++VSAS D+T+K+W+   G+C  T++    H+++V C  F+P +    IVS S+D +VK+W +   K   TL+ H+  ++ V  + +GSL  SG  DG+  +WD A G+ L +L
Sbjct:    8 AERAQSLLSAPRREEEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLK---GHSDFVFCCDFNPPS--NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTL 203

HSP 2 Score: 95.9005 bits (237), Expect = 2.181e-19
Identity = 63/204 (30.88%), Postives = 102/204 (50.00%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGY-VNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            N + + +++ D  II+W         G  ++ L GHS  + DV  SSD    +S S D  L++WD+  GK  +   GH+  V    F+  +  IVS S D ++K+W    G+C  T+    AH++ +S V F+ N     IVS S+D   ++W+ ++ +   TLA      V+ V  SP+G    +   D  + LWD + G+ L
Sbjct:   50 NGEWLASSAADALIIIWGAYD-----GNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLS---AHSDPISAVNFNCNG--SLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCL 243

HSP 3 Score: 89.3521 bits (220), Expect = 2.041e-17
Identity = 65/197 (32.99%), Postives = 101/197 (51.27%), Query Frame = 1

Query:   49 SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLS-VAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLW 627
            S++IV+ S D+S+ +W    E KT G   + L+ HS  +  V  + +G   +SGS+DG  R+WD A G+  R         +S V FS + + I++A+ D T+KLW+ + G C  T   G  + ++     FS  T +  +VS S D  V +WNL   ++   L GHT  V + A  P  ++ AS     D  I +W
Sbjct:  135 SNLIVSGSFDESVKIW----EVKT-GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT-GHKNEKYCLFASFSV-TGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324

HSP 4 Score: 71.633 bits (174), Expect = 4.404e-12
Identity = 44/132 (33.33%), Postives = 73/132 (55.30%), Query Frame = 1

Query:  274 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            GH+  + SV FS +   + S++ D  I +W    G CK T+     H+  +S V +S ++ +  +VSAS D+T+KVW++ + K   TL GH+ +V     +P  +L  SG  D  + +W++  GK L +L A
Sbjct:   37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLY---GHSLEISDVAWSSDSSR--LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSA 163

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 68/210 (32.38%), Postives = 105/210 (50.00%), Query Frame = 1

Query:    4 AHTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 633
            AH+  V+++        ++ T   D  + VW + K           LTGH+  ++ + +S+  +  ++GS  G +R+WDL   K  R  +GH  ++ S+ F      + S S D  IKLW+     K  I +  +HT+ V C+RFSP+     + SA+ D TVK+W+L+  K+     GH+G VN V   P   L ASG  D  I  WDL
Sbjct:   18 AHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMS-----LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV--RRKGCIFKYKSHTQAVRCLRFSPD--GKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218

HSP 2 Score: 84.3445 bits (207), Expect = 6.566e-16
Identity = 59/206 (28.64%), Postives = 98/206 (47.57%), Query Frame = 1

Query:   19 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV 615
            +T   TPI++       ++IV  S+  SI VW L   +       R L GH   +  +     G F  SGS D +++LWD+       ++  HT+ V  + FS D + + SA+ D T+KLW+ T G+  +   E   H+  V+ V F P+  +  + S S DRT++ W+L    + + +      V  +  +PDG     G +D +
Sbjct:   59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAK-----ILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMF---EFTGHSGPVNVVEFHPS--EYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL 254

HSP 3 Score: 67.3958 bits (163), Expect = 8.306e-11
Identity = 45/174 (25.86%), Postives = 75/174 (43.10%), Query Frame = 1

Query:  136 RRLTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLY 654
            + +  HS  V  +VL  S G+   +G  D  + +W + +        GHT  + S+  S     IV+ S+  +I++W+   E    ++    H   +  + F P      + S S D  +K+W++           HT  V  +  SPDG   AS   D  + LWDL  GK ++
Sbjct:   14 QEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDL--EAAKILRTLLGHKANICSLDFHP--YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMF 183

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.489e-23
Identity = 68/210 (32.38%), Postives = 104/210 (49.52%), Query Frame = 1

Query:    4 AHTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 633
            AH   V+++     +  ++ T   D  + +W + K           LTGH+  V+ V  ++  +  ++GS  G LR+WDL   K  R  +GH  +V S+ F      + S S D  IKLW+     K  +     HT+ V C+RFSP+     + SAS D +VK+W+L+  K+ A L+ H G VN +   P+  L ASG  D  +  WDL
Sbjct:   18 AHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMS-----LTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDV--RRKGCVFRYKGHTQAVRCLRFSPDG--KWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDL 218

HSP 2 Score: 96.6709 bits (239), Expect = 1.278e-19
Identity = 65/206 (31.55%), Postives = 99/206 (48.06%), Query Frame = 1

Query:   19 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV 615
            +T   TP+++       ++IV  S+  S+ +W L   +       R L GH   V  +     G+F  SGS D  ++LWD+       R+ GHT+ V  + FS D + + SAS D ++KLW+ T G+    + E   H   V+ + F PN  +  + S S DRTV+ W+L   +L     G T  V  +  S DG     GGKD +
Sbjct:   59 LTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAK-----ILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSE---HKGPVNIIEFHPN--EYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKDSL 254

HSP 3 Score: 75.0998 bits (183), Expect = 3.983e-13
Identity = 51/176 (28.98%), Postives = 77/176 (43.75%), Query Frame = 1

Query:  136 RRLTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            + +  H   V  VVL  S G+   +G  D  + LW + +        GHT  V SV F+     IV+ S+  ++++W+   E    ++    H   VS + F P      + S S D  +K+W++          GHT  V  +  SPDG   AS   D  + LWDL  GK +  L
Sbjct:   14 QEIVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDL--EAAKILRTLMGHKANVSSLDFHP--YGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAEL 185

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.246e-23
Identity = 68/210 (32.38%), Postives = 104/210 (49.52%), Query Frame = 1

Query:    4 AHTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 633
            AH   V+++     +  ++ T   D  + +W + K           LTGH+  V+ V  ++  +  ++GS  G LR+WDL   K  R  +GH  +V S+ F      + S S D  IKLW+     K  +     HT+ V C+RFSP+     + SAS D +VK+W+L+  K+ A L+ H G VN +   P+  L ASG  D  +  WDL
Sbjct:   18 AHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMS-----LTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDV--RRKGCVFRYKGHTQAVRCLRFSPDG--KWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDL 218

HSP 2 Score: 94.3597 bits (233), Expect = 6.345e-19
Identity = 65/206 (31.55%), Postives = 98/206 (47.57%), Query Frame = 1

Query:   19 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV 615
            +T   TP+++       ++IV  S+  S+ VW L   +       R L GH   V  +     G F  SGS D  ++LWD+       R+ GHT+ V  + FS D + + SAS D ++KLW+ T G+    + E   H   V+ + F PN  +  + S S DRTV+ W+L   +L     G T  V  +  S DG     GG+D +
Sbjct:   59 LTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAK-----ILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSE---HKGPVNIIEFHPN--EYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDGGCIFCGGRDAL 254

HSP 3 Score: 72.7886 bits (177), Expect = 1.977e-12
Identity = 50/176 (28.41%), Postives = 76/176 (43.18%), Query Frame = 1

Query:  136 RRLTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            + +  H   V  VVL  S G+   +G  D  + LW + +        GHT  V SV F+     IV+ S+  ++++W+   E    ++    H   V  + F P      + S S D  +K+W++          GHT  V  +  SPDG   AS   D  + LWDL  GK +  L
Sbjct:   14 QEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDL--EAAKILRTLMGHKANVCSLDFHP--YGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAEL 185

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23
Identity = 68/210 (32.38%), Postives = 100/210 (47.62%), Query Frame = 1

Query:    4 AHTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 633
            AH+  V+++     +  ++ T   D  + +W ++K           LTGH+  V  +  +S  +  ++GS  G LRLWDL   K  R  +GH   + S+ F      + S S D  IKLW+     K  +     HT+ V C+ FSP+     + SAS D TVK+W+L   K+      HT  VN V   P+  L ASG  D  + LWDL
Sbjct:   18 AHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMS-----LTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDV--RRKGCVFRYKGHTQAVRCLAFSPD--GKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218

HSP 2 Score: 104.76 bits (260), Expect = 4.694e-22
Identity = 63/188 (33.51%), Postives = 97/188 (51.60%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKD 609
            + + +V  S   S+ +W L   +       R L GH   +  +     G++  SGS D  ++LWD+       R+ GHT+ V  +AFS D + + SAS D T+KLW+ +      I E  +HT  V+ V+F PN  +  + S S DRTVK+W+L    +  +  G TG V +V  +PDGS   SG ++
Sbjct:   74 SEERVVAGSLSGSLRLWDLEAAK-----ILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLI--AGKMITEFTSHTSAVNVVQFHPN--EYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN 252

HSP 3 Score: 76.2554 bits (186), Expect = 1.788e-13
Identity = 47/173 (27.17%), Postives = 79/173 (45.66%), Query Frame = 1

Query:  136 RRLTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            + +  HS  V  +VL  S G+   +G  D  + +W +++        GHT  V  + F+    ++V+ S   +++LW+   E    ++    H   +S + F P  +   + S S D  +K+W++          GHT  V  +A SPDG   AS   D  + LWDL  GK +
Sbjct:   14 QEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDL--EAAKILRTLMGHKASISSLDFHP--MGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMI 182

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.613e-22
Identity = 60/174 (34.48%), Postives = 97/174 (55.75%), Query Frame = 1

Query:  142 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            L GH+  V  V  S +G++  S S D  +++W   +GK  +   GH   +  VA+S D+R +VS S D+T+K+W  + G+   T++    H+ +V C  F+P +    IVS S+D +V++W++   K   TL  H+  V+ V  + DGSL  S   DG+  +WD A G+ L +L
Sbjct:   68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLK---GHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 236

HSP 2 Score: 101.293 bits (251), Expect = 5.190e-21
Identity = 70/219 (31.96%), Postives = 116/219 (52.97%), Query Frame = 1

Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVW--HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK-LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            HT  V+A+     N + + ++S DK I +W  +  K EKT       ++GH   + DV  SSD +  +SGS D  L++W+L+ GKS +   GH+  V    F+  +  IVS S D ++++W+   G+C  T+    AH++ VS V F  N     IVS+S+D   ++W+ ++ + L+  +      V+ V  SP+G    +   D  + LWD ++GK L
Sbjct:   71 HTKAVSAVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKT-------ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL---PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 276

HSP 3 Score: 87.8113 bits (216), Expect = 5.938e-17
Identity = 71/240 (29.58%), Postives = 106/240 (44.17%), Query Frame = 1

Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPN-------TLQPT------------------------------------IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLW 627
            +S ++V+ S DK++ VW L+      G + + L GHS++V     +      +SGS+D  +R+WD+  GK  +    H+  V +V F+ D   IVS+S D   ++W+T  G+C  T+ + D     VS V+FSPN       TL  T                                    IVS S D  V +WNL + ++   L GHT  V   A  P  ++ AS     D  I LW
Sbjct:  125 DSRLLVSGSDDKTLKVWELST-----GKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357

HSP 4 Score: 78.1814 bits (191), Expect = 4.705e-14
Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = 1

Query:  274 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            GHTK V +V FS +   + S+S D+ IK+W    G+ + TI     H   +S V +S ++    +VS S D+T+KVW LS  K   TL GH+ YV     +P  +L  SG  D  + +WD+  GK L +L A
Sbjct:   70 GHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDSR--LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 196

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: WDR38_MOUSE (WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22
Identity = 66/215 (30.70%), Postives = 102/215 (47.44%), Query Frame = 1

Query:   55 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEG-DAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA-VIHALCF 693
            +I ++S D SI +W + + +  +      L GH   V+ V  S D +   SG WD    +W++  G+     VGH   + S  FS  +  + + S D T+ +W+             + HT  +SC+ +S + L   + S SWD+T+ VW  +   L   L GHT +VN++A SPD    AS G    + +WD   GK L +L     V HA  F
Sbjct:   82 LIASSSSDHSIRLWDVARSKCLHV-----LKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGL---LASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIF 288

HSP 2 Score: 85.5001 bits (210), Expect = 2.947e-16
Identity = 55/171 (32.16%), Postives = 80/171 (46.78%), Query Frame = 1

Query:  127 VARRRLTGHSHF-VQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 633
            V R R  G  H  V     S DG+  L+ S DG + +W    G+   R  GH   V S  FS D R I S+S D +I+LW+    +C + ++    H   V  V FSP++ Q  + S  WD+   VW + + +    L GH   + +   SP     A+G  D  + +WDL
Sbjct:   16 VGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLK---GHQRSVETVSFSPDSKQ--LASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDL 181

HSP 3 Score: 82.8037 bits (203), Expect = 1.910e-15
Identity = 59/204 (28.92%), Postives = 89/204 (43.63%), Query Frame = 1

Query:    1 RAHTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGK---SARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG 600
            + H   V  ++   D S  + +   DK  IVW +    + +      L GH   +Q    S       +GSWD  + +WDL       S     GHT ++  + +S     + S S D+TI +W  T       ++    HT WV+ + FSP+ L+  + SA + RTVKVW+    K   TL G     +    +PDG L  SG
Sbjct:  107 KGHQRSVETVSFSPD-SKQLASGGWDKRAIVWEVQSGRRVH-----LLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGL-LASGSWDKTICVWKPTTNNLPLQLK---GHTIWVNSLAFSPDELK--LASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSG 298

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: LIS1_XENTR (Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22
Identity = 73/222 (32.88%), Postives = 105/222 (47.30%), Query Frame = 1

Query:   55 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPD--------------------GSLCASGGKDGVILLWDLAEGKRLYSL 660
            ++VTAS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+                    G    SG +D  I +WD++ G  L +L
Sbjct:  122 VMVTASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTL 334

HSP 2 Score: 94.3597 bits (233), Expect = 6.345e-19
Identity = 67/242 (27.69%), Postives = 109/242 (45.04%), Query Frame = 1

Query:    1 RAHTHLVTAIATPIDNSD-MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTI------------------VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            + HT  V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +   TI                  +S S D+T+K+W++S      TL GH  +V  V   P G    S   D  I +WD    + + +L+A
Sbjct:  147 KGHTDSVQDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNA 378

HSP 3 Score: 87.0409 bits (214), Expect = 1.013e-16
Identity = 56/166 (33.73%), Postives = 79/166 (47.59%), Query Frame = 1

Query:  142 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA 636
            L+GH   V  V+        ++ S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS   D  + +W +A
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264

HSP 4 Score: 86.2705 bits (212), Expect = 1.728e-16
Identity = 62/229 (27.07%), Postives = 107/229 (46.72%), Query Frame = 1

Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQ--------------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 630
            H H V+++A  + N D IV+ASRDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  +       H   V  ++++ ++                      ++S SRD+TIK+W+ ++G C  T+     H  WV  V+F P      I+S + D+T+++W+  N +   TL  H  +V ++          +G  D  + +W+
Sbjct:  191 HDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLV---GHDNWVRGVQFHPGG--KFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408

[Close]

BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: LIS1B_XENLA (Lissencephaly-1 homolog B OS=Xenopus laevis GN=pafah1b1-B PE=2 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22
Identity = 73/222 (32.88%), Postives = 105/222 (47.30%), Query Frame = 1

Query:   55 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPD--------------------GSLCASGGKDGVILLWDLAEGKRLYSL 660
            ++VTAS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+                    G    SG +D  I +WD++ G  L +L
Sbjct:  122 VMVTASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTL 334

HSP 2 Score: 94.7449 bits (234), Expect = 4.858e-19
Identity = 67/242 (27.69%), Postives = 109/242 (45.04%), Query Frame = 1

Query:    1 RAHTHLVTAIATPIDNSD-MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTI------------------VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            + HT  V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +   TI                  +S S D+T+K+W++S      TL GH  +V  V   P G    S   D  I +WD    + + +L+A
Sbjct:  147 KGHTDSVQDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNA 378

HSP 3 Score: 87.4261 bits (215), Expect = 7.756e-17
Identity = 56/166 (33.73%), Postives = 79/166 (47.59%), Query Frame = 1

Query:  142 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA 636
            L+GH   V  V+        ++ S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS   D  + +W +A
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264

HSP 4 Score: 86.2705 bits (212), Expect = 1.728e-16
Identity = 62/229 (27.07%), Postives = 107/229 (46.72%), Query Frame = 1

Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQ--------------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 630
            H H V+++A  + N D IV+ASRDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  +       H   V  ++++ ++                      ++S SRD+TIK+W+ ++G C  T+     H  WV  V+F P      I+S + D+T+++W+  N +   TL  H  +V ++          +G  D  + +W+
Sbjct:  191 HDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLV---GHDNWVRGVQFHPGG--KFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408

The following BLAST results are available for this feature:

BLAST of CF835550 vs. ExPASy Swiss-Prot

BLAST of CF835550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415


Match Name	E-value	Identity	Description
WDR5_BOVIN	5.016e-24	35.06	WD repeat-containing protein 5 OS=Bos taurus GN=WD...	[more]
WDR5B_MOUSE	5.016e-24	32.84	WD repeat-containing protein 5B OS=Mus musculus GN...	[more]
KTNB1_CHICK	5.016e-24	32.38	Katanin p80 WD40-containing subunit B1 OS=Gallus g...	[more]
KTNB1_XENLA	2.489e-23	32.38	Katanin p80 WD40-containing subunit B1 OS=Xenopus ...	[more]
KTNB1_XENTR	4.246e-23	32.38	Katanin p80 WD40-containing subunit B1 OS=Xenopus ...	[more]
KTNB1_DANRE	9.459e-23	32.38	Katanin p80 WD40-containing subunit B1 OS=Danio re...	[more]
WDS_DROME	1.613e-22	34.48	Protein will die slowly OS=Drosophila melanogaster...	[more]
WDR38_MOUSE	2.107e-22	30.70	WD repeat-containing protein 38 OS=Mus musculus GN...	[more]
LIS1_XENTR	2.107e-22	32.88	Lissencephaly-1 homolog OS=Xenopus tropicalis GN=p...	[more]
LIS1B_XENLA	2.107e-22	32.88	Lissencephaly-1 homolog B OS=Xenopus laevis GN=paf...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS03_01H09_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H09, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF835550 ID=CF835550; Name=CF835550; organism=Citrus sinensis; type=EST; length=694bp
CGCGCCCACACCCACTTGGTGACGGCGATCGCCACCCCAATCGACAACTC
TGACATGATCGTGACGGCCTCGCGTGACAAGTCCATCATTGTCTGGCACC
TCACTAAGGAGGAAAAGACCTACGGCGTTGCGCGCCGTCGTTTGACCGGC
CACTCTCACTTCGTGCAGGACGTCGTCCTCTCCTCGGACGGCCAGTTCGC
TCTCTCCGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGATTTGGCCGAGG
GAAAATCCGCCCGCAGGTTCGTCGGCCACACTAAGGACGTTCTCTCCGTC
GCCTTCTCGATCGACAACCGTCAGATTGTATCGGCCTCTCGTGACCGTAC
GATCAAGTTGTGGAACACGCTCGGCGAGTGCAAGTACACGATTCAAGAGG
GAGACGCTCACACTGAGTGGGTTTCTTGTGTTAGGTTCAGCCCCAACACG
CTTCAGCCCACTATCGTTTCCGCCTCGTGGGACCGTACGGTCAAAGTGTG
GAATTTGAGCAACTGCAAGCTTAGGGCTACTCTTGCCGGGCACACTGGAT
ACGTGAACACCGTCGCAGTGTCGCCGGATGGTTCGTTGTGTGCCAGTGGA
GGGAAAGATGGTGTGATTCTGTTGTGGGATTTGGCTGAGGGAAAAAGACT
CTACTCGCTCGACGCTGGTGCTGTCATTCACGCGCTCTGCTTCA