CF835550

Overview
NameCF835550
Unique NameCF835550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13759 contig Csv1_Contig13759:108..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20
Identity = 60/185 (32.43%), Postives = 92/185 (49.73%), Query Frame = 1
Query:  142 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG---KRLYSLDAGAVIHA 684
            L+GH+  V  V  S DG    SGS D  + LWD A G       GH+  V  VA++ + R + +A+ D ++KLW+   G C  T+     HT +V C  F        + S S+D T+++W++ + +    +  H+  V + A S DGS+  +   DG+I LWD   G   K L+  D+  V  A
Sbjct:   36 LSGHTKAVAAVKFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTL---TGHTNYVFCCNFD-GAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTGHCLKTLFDRDSPPVSFA 216          

HSP 2 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 70/270 (25.93%), Postives = 111/270 (41.11%), Query Frame = 1
Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQF-------------------------------------------ALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG--------------SLCASGGKDGVILLWDLAEG 642
            HT  V A+    D S ++ + S D+++ +W     +   G     L GHS  V DV  + +G++                                             SGS+D  LRLWD+  G+  R    H+  V S AFS D   +V++S D  I+LW+T  G C  T+ + D+    VS   F+PN     ++  + D   K+W+ +  + R T AG  G+VNT      G              S+  +G +DG +  +D++ G
Sbjct:   39 HTKAVAAVKFSPDGS-LLASGSADRTVALW-----DAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTGHCLKTLFDRDSPP--VSFAAFTPNA--KYVLCNTLDGRAKLWDYAAGRTRRTYAG--GHVNTQFCISSGFLGGSSSASFDLGCSMVVTGSEDGSLAAYDISTG 296          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: APAF_HUMAN (Apoptotic protease-activating factor 1 OS=Homo sapiens GN=APAF1 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20
Identity = 59/197 (29.95%), Postives = 96/197 (48.73%), Query Frame = 1
Query:   76 DKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD 663
            D  ++      ++    ++R  +  H+  V     S DGQ   S   D  L+++    G+       H  +VL  AFS D+R I + S D+ +K+WN++ GE  +T  E   H+E V+C  F+ ++    + + S D  +K+W+L+  + R T+ GHT  VN    SPD  L AS   DG + LWD        S++
Sbjct:  589 DNGMLYLEWINKKNITNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDE---HSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSIN 782          

HSP 2 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 59/205 (28.78%), Postives = 99/205 (48.29%), Query Frame = 1
Query:   58 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDR-TVKVWNLSNCKL--------RATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 645
            ++++S D  I VW+   ++  +      L GH   V+D  L  + +  LS S+DG +++W++  G   + FV H   VLS   S D  +  S S D+T K+W+   +    + E   H     CVR S  ++  T+++   D   +++WN+SN +L            A H G+V  +  SPDG +  S G  G I  W++  G+
Sbjct: 1018 LISSSDDAEIQVWNWQLDKCIF------LRGHQETVKDFRLLKNSRL-LSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSF--DLLLPLHELRGHN---GCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAG--GYIKWWNVVTGE 1208          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.788e-20
Identity = 63/195 (32.31%), Postives = 96/195 (49.23%), Query Frame = 1
Query:   52 DMIVTASRDKSIIVWHLTKEE--KTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 630
            +++++ S D +I +W L       TY        GH + V DV  +  G + +S S+D   RLW     ++ R FVGH  DV  V F  ++  + + S DRT++LW+ +      +  G  H   VS + FS       + S S D  + +W+LSN  L  TL  HT  V T+  S DG++ A+ G D  + LWD
Sbjct:  463 NLLLSCSEDSTIRLWSLLTWSCVVTY-------RGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTG--HKGSVSSLAFS--ACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646          

HSP 2 Score: 90.8929 bits (224), Expect = 7.015e-18
Identity = 69/244 (28.28%), Postives = 104/244 (42.62%), Query Frame = 1
Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVWHLT-----------------KE---------EKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 660
            ++H     A   D+S M+     D S+ +W LT                 KE         +   G   R L GH+  V     + +    LS S D  +RLW L        + GH   V  V F+      VS S D+T +LW T  +    ++    H   V CV+F PN+    + + S DRTV++W+    +    + GH G V+++A S  G   ASG  D  I++WDL+ G  + +L
Sbjct:  375 NSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWAT--DSNQALRVFVGHLSDVDCVQFHPNSNY--VATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTL 614          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: POP2_SCHPO (WD repeat-containing protein pop2 OS=Schizosaccharomyces pombe GN=pop2 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19
Identity = 62/214 (28.97%), Postives = 108/214 (50.47%), Query Frame = 1
Query:   58 IVTASRDKSIIVWHLTKE-------EKTYGVAR--------RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            IV+ SRD ++ VW L K        + T  + R          L GH+  V+ +  S  G   +SGS+D  +R+W ++ G+      GH+  + SV +  +    +S S D++I++W+ + G CKY ++  DA    +       N  Q  ++S S D T+++W+L+  K    L  ++GY+++  VS +  + +  G DG + LWD+  GK L
Sbjct:  460 IVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTI--SGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLL-------NVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISSF-VSDEHKIIS--GNDGSVKLWDVRTGKLL 661          

HSP 2 Score: 72.4034 bits (176), Expect = 2.582e-12
Identity = 60/238 (25.21%), Postives = 103/238 (43.28%), Query Frame = 1
Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNR--------------QIVSASRDRTIKLW---------------NTLGECK---YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD 663
            + D I+T S   +I + +        GV   RL GH   V  V +  +    +SGS D  +R+W++ + K    F GH   +  +   + +R               IVS SRD T+++W               N++   +   Y +     HT+ V  +    + L    VS S+D ++++W +S  +    L GH+  + +V   P+ ++C SG  D  I +WDL+ G   Y L+
Sbjct:  360 HKDRIITTSGSGTIQIHNAIT-----GVLEARLEGHKEGVWAVKIHENT--LVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTISGYGDIL----VSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLE 586          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: KTNB1_ARATH (Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19
Identity = 62/210 (29.52%), Postives = 93/210 (44.29%), Query Frame = 1
Query:    4 AHTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 633
            AH+  V  +     +S ++VT   D  + +W + K       A   L GHS  +  V   +      +G+  G ++LWDL E K  R   GH  + +SV F        S S D  +K+W+     K  I     HT  V+ +RF+P+     +VS   D  VKVW+L+  KL      H G + ++   P   L A+G  D  +  WDL
Sbjct:   14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPN-----AILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI--RKKGCIHTYKGHTRGVNVLRFTPD--GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214          

HSP 2 Score: 79.7221 bits (195), Expect = 1.617e-14
Identity = 57/199 (28.64%), Postives = 94/199 (47.24%), Query Frame = 1
Query:   43 DNSDMIVTASRDKSII-VWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV-ILLWD 630
            D S+++V A      I +W L + +       R LTGH      V     G+F  SGS D  L++WD+ +      + GHT+ V  + F+ D R +VS   D  +K+W+ T G+    + E  +H   +  + F P+     + + S DRTVK W+L   +L  +    T  V  ++ +PDG     G ++ + I  W+
Sbjct:   68 DASEVLVAAGAASGTIKLWDLEEAKIV-----RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK---LLTEFKSHEGQIQSLDFHPHEF--LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWE 256          

HSP 3 Score: 73.9442 bits (180), Expect = 8.874e-13
Identity = 43/150 (28.67%), Postives = 71/150 (47.33%), Query Frame = 1
Query:  202 LSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 651
            ++G  D ++ LW + +  +     GH+  + SV F      + + +   TIKLW+ L E K  ++    H    +C+    +       S S D  +K+W++       T  GHT  VN +  +PDG    SGG+D ++ +WDL  GK L
Sbjct:   33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEAKI-VRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL 178          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: LIS1_DROME (Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19
Identity = 62/241 (25.73%), Postives = 107/241 (44.40%), Query Frame = 1
Query:    1 RAHTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            + HT  V  +A       ++ + S D SI +W   +  +      + + GH H V  V     G + LS S D  +++W++A G   + + GH + V  V   I+     + S D+TI++W T   +CK  +++   H   V C+ ++P                      P + S S D+T+++W++S      TL+GH  +V  +A  P G    S   D  I +WDL   + + +L A
Sbjct:  147 KGHTDSVQDVAFDAQGK-LLASCSADLSIKLWDFQQSYECI----KTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRD---HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYA 379          

HSP 2 Score: 87.4261 bits (215), Expect = 7.756e-17
Identity = 61/190 (32.11%), Postives = 88/190 (46.32%), Query Frame = 1
Query:   76 DKSIIVWHLTKEEKTYGVARRR------LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 627
            +K +I    TK ++T G    R      LTGH   +  V+        +S S D  +R+WD   G+  R   GHT  V  VAF    + + S S D +IKLW+   +    I+    H   VS V F P      ++SAS DRT+K+W ++      T  GH  +V  V V  +GS+ A+   D  I +W
Sbjct:   76 EKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWD-FQQSYECIKTMHGHDHNVSSVAFVP--AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW 262          

HSP 3 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 63/230 (27.39%), Postives = 108/230 (46.96%), Query Frame = 1
Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSAR---RFVGHTKD-----------VLSVAFSIDNRQ-------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 630
            H H V+++A  +   D +++ASRD++I +W     E   G   +  TGH  +V+ V +  +G    + S D  +R+W L   K  +   R   HT +            ++ A   DN++       + S SRD+TI++W+ ++G C  T+     H  WV  + F P      +VSAS D+T++VW+L N +   TL  H  +  ++          SG  D  + +W+
Sbjct:  192 HDHNVSSVAF-VPAGDYVLSASRDRTIKMW-----EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLS---GHDNWVRGLAFHPGGKY--LVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: LIN23_CAEEL (F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans GN=lin-23 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19
Identity = 69/207 (33.33%), Postives = 106/207 (51.21%), Query Frame = 1
Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEG-DAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD 663
            + D IV+  RD +I +W    + K Y  +R  L+GH+  V  + L  D +  +SGS D  +R+WD+  G+  +  + H + VL + F+  N  +V+ S+DR+I +W+ +     TI+     H   V+ V F        IVSAS DRT+KVW++   +   TLAGH   +    +   G L  SG  D  I LWD+  G  L  L+
Sbjct:  231 DDDKIVSGLRDNTIKIW----DRKDYSCSRI-LSGHTGSV--LCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRY----IVSASGDRTIKVWSMDTLEFVRTLAGHRRGI--ACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLE 422          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19
Identity = 59/167 (35.33%), Postives = 79/167 (47.31%), Query Frame = 1
Query:  142 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 642
            L GHS  V     S D  + LS S DG +RLW L        + GH   V    FS      VS   DR  +LW T       I  G  H   V+C RF PN+    + + S DRTV++W++ N        GH G ++++  SP+G   A+G  DG +LLWD+  G
Sbjct:  539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG--HLADVNCTRFHPNSNY--VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG 701          

HSP 2 Score: 87.0409 bits (214), Expect = 1.013e-16
Identity = 58/194 (29.90%), Postives = 93/194 (47.94%), Query Frame = 1
Query:   58 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECK--YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 630
            ++++S D ++ +W L       G       GH++ V D   S  G + +SG  D   RLW     +  R F GH  DV    F  ++  + + S DRT++LW+ L G C   +T  +G  H+     + FSPN     + + + D  V +W++ +  +   L GHT  V ++  S DG + ASG  D  + LWD
Sbjct:  558 LLSSSEDGTVRLWSLQTFTCLVGYK-----GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHS-----LTFSPNGR--FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739          

HSP 3 Score: 72.0182 bits (175), Expect = 3.372e-12
Identity = 35/109 (32.11%), Postives = 56/109 (51.38%), Query Frame = 1
Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL 372
            NS+ + T S D+++ +W +       G   R  TGH   +  +  S +G+F  +G+ DG + LWD+  G       GHT  V S+ FS D   + S S D T++LW+ +
Sbjct:  638 NSNYVATGSADRTVRLWDVLN-----GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAI 741          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: POF1_SCHPO (F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces pombe GN=pof1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19
Identity = 67/176 (38.07%), Postives = 92/176 (52.27%), Query Frame = 1
Query:  142 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 666
            L+GHS  V  + L  +     SGS+D  +RLW+LA  +      GH+  V  + F  D  +++S S D+TI++WN    EC  +I  G  HT+ V C+ F    L    VS S D TVK+W+ S  K R TL GHTG VN+V +  D  L  SG  D  I +W L     L++  A
Sbjct:  269 LSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSEC-ISILHG--HTDSVLCLTFDSTLL----VSGSADCTVKLWHFSGGK-RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSA 432          

HSP 2 Score: 72.7886 bits (177), Expect = 1.977e-12
Identity = 60/194 (30.93%), Postives = 88/194 (45.36%), Query Frame = 1
Query:   58 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAE 639
            +++ S DK+I +W+    E         L GH+  V  + L+ D    +SGS D  ++LW  + GK      GHT  V SV    D   ++S S D TIK+W+   E    +    AH   V  +  + + L     S S D T+K W++   K   TL GH   V  +A   D     SG  DGV+ +W+  E
Sbjct:  326 LISGSMDKTIRIWNYRTSE-----CISILHGHTDSV--LCLTFDSTLLVSGSADCTVKLWHFSGGKRIT-LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSL--ETNTCLHTFSAHIGPVQSLALADSRL----FSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAA--DHLRLISGAHDGVVKVWEACE 503          

HSP 3 Score: 70.8626 bits (172), Expect = 7.512e-12
Identity = 62/207 (29.95%), Postives = 94/207 (45.41%), Query Frame = 1
Query:    7 HTHLVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 627
            H H  + +    D S ++V+ S D ++ +WH +      G  R  L GH+  V  V +  D    LSGS D  +++W L        F  H   V S+A +  + ++ S S D TIK W+   E K  +     H E V     + + L+  ++S + D  VKVW    C+   TL  H+  V +VA+        SG +DG I LW
Sbjct:  350 HGHTDSVLCLTFD-STLLVSGSADCTVKLWHFS------GGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALA--DSRLFSCSLDGTIKQWDI--EKKKCVHTLFGHIEGV--WEIAADHLR--LISGAHDGVVKVWEA--CECVHTLKNHSEPVTSVALG--DCEVVSGSEDGKIYLW 537          
BLAST of CF835550 vs. ExPASy Swiss-Prot
Match: MET30_YEAST (F-box protein MET30 OS=Saccharomyces cerevisiae GN=MET30 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19
Identity = 64/198 (32.32%), Postives = 104/198 (52.53%), Query Frame = 1
Query:   46 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVV-LSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 633
            N+D+    +R   +I     K E  +     R+      +  V+ L  + +   +GS+D  + +WDL  GK  RR  GH+  V ++ F  D+R++++ S D+TI++WN + GEC  T +    H++ V     S ++ Q  IVS S D+TVKVW++ + +   TL GHT +VN V + P    C S   D  I +WD+
Sbjct:  263 NADIQTQTTRPWKVIYRERFKVESNWRKGHCRIQEFKGHMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF--DDRKLITGSLDKTIRVWNYITGECISTYR---GHSDSV----LSVDSYQKVIVSGSADKTVKVWHVES-RTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDI 450          
The following BLAST results are available for this feature:
BLAST of CF835550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 415
Match NameE-valueIdentityDescription
MUT11_CHLRE5.738e-2032.43Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut1... [more]
APAF_HUMAN5.738e-2029.95Apoptotic protease-activating factor 1 OS=Homo sap... [more]
TAF5_DROME9.788e-2032.31Transcription initiation factor TFIID subunit 5 OS... [more]
POP2_SCHPO1.278e-1928.97WD repeat-containing protein pop2 OS=Schizosacchar... [more]
KTNB1_ARATH1.278e-1929.52Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
LIS1_DROME1.670e-1925.73Lissencephaly-1 homolog OS=Drosophila melanogaster... [more]
LIN23_CAEEL1.670e-1933.33F-box/WD repeat-containing protein lin-23 OS=Caeno... [more]
TAF5_HUMAN2.181e-1935.33Transcription initiation factor TFIID subunit 5 OS... [more]
POF1_SCHPO2.181e-1938.07F-box/WD repeat-containing protein pof1 OS=Schizos... [more]
MET30_YEAST2.181e-1932.32F-box protein MET30 OS=Saccharomyces cerevisiae GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01H09_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835550 ID=CF835550; Name=CF835550; organism=Citrus sinensis; type=EST; length=694bp
CGCGCCCACACCCACTTGGTGACGGCGATCGCCACCCCAATCGACAACTC
TGACATGATCGTGACGGCCTCGCGTGACAAGTCCATCATTGTCTGGCACC
TCACTAAGGAGGAAAAGACCTACGGCGTTGCGCGCCGTCGTTTGACCGGC
CACTCTCACTTCGTGCAGGACGTCGTCCTCTCCTCGGACGGCCAGTTCGC
TCTCTCCGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGATTTGGCCGAGG
GAAAATCCGCCCGCAGGTTCGTCGGCCACACTAAGGACGTTCTCTCCGTC
GCCTTCTCGATCGACAACCGTCAGATTGTATCGGCCTCTCGTGACCGTAC
GATCAAGTTGTGGAACACGCTCGGCGAGTGCAAGTACACGATTCAAGAGG
GAGACGCTCACACTGAGTGGGTTTCTTGTGTTAGGTTCAGCCCCAACACG
CTTCAGCCCACTATCGTTTCCGCCTCGTGGGACCGTACGGTCAAAGTGTG
GAATTTGAGCAACTGCAAGCTTAGGGCTACTCTTGCCGGGCACACTGGAT
ACGTGAACACCGTCGCAGTGTCGCCGGATGGTTCGTTGTGTGCCAGTGGA
GGGAAAGATGGTGTGATTCTGTTGTGGGATTTGGCTGAGGGAAAAAGACT
CTACTCGCTCGACGCTGGTGCTGTCATTCACGCGCTCTGCTTCA
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