CF835552

Overview
NameCF835552
Unique NameCF835552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: F263_PONAB (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 OS=Pongo abelii GN=PFKFB3 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.825e-32
Identity = 64/108 (59.26%), Postives = 86/108 (79.63%), Query Frame = -2
Query:  352 PKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 675
            P  QW+AL+EI+AGVC+ +TYEEI+   PEEY  R++DK  YRYP GESY D++QRLEPVI+ELERQ   V+VI HQAVLR L AYF D+  +E+P+++ PLHT++++
Sbjct:  314 PYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQE-NVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKL 420          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: F263_HUMAN (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 OS=Homo sapiens GN=PFKFB3 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.825e-32
Identity = 64/108 (59.26%), Postives = 86/108 (79.63%), Query Frame = -2
Query:  352 PKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 675
            P  QW+AL+EI+AGVC+ +TYEEI+   PEEY  R++DK  YRYP GESY D++QRLEPVI+ELERQ   V+VI HQAVLR L AYF D+  +E+P+++ PLHT++++
Sbjct:  314 PYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQE-NVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKL 420          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: F26_CAEEL (Probable 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase OS=Caenorhabditis elegans GN=K02B2.1 PE=3 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.505e-31
Identity = 61/104 (58.65%), Postives = 85/104 (81.73%), Query Frame = -2
Query:  352 WRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 663
            W+ALDE++AG+C+G+TYE+I +  P++ + R  DK  YRYP GESY DV+ RLEPVI+ELERQ A V+V+SHQAVLR + AYF DRPL E+P+I+ PLH+++++
Sbjct:  319 WKALDELDAGICEGLTYEDILQRYPKQADDRATDKYHYRYPSGESYEDVVSRLEPVIMELERQ-ANVLVVSHQAVLRCVLAYFYDRPLSELPYIDIPLHSLVKL 421          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: F262_PONAB (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 OS=Pongo abelii GN=PFKFB2 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.380e-31
Identity = 67/124 (54.03%), Postives = 88/124 (70.97%), Query Frame = -2
Query:  310 GFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEIQMGVTGVQEKRYKL 681
            G P  QW+ L+EI+AGVC+ MTY EI+K  PEE+  R ++K  YRYP GESY D++QRLEPVI+ELERQ   V+VISHQAV+R L AYF D+   E+P++  PLHTI ++     G + +  KL
Sbjct:  315 GVPYEQWKILNEIDAGVCEEMTYAEIEKRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELERQ-GNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKL 437          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: F262_HUMAN (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 OS=Homo sapiens GN=PFKFB2 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.380e-31
Identity = 67/124 (54.03%), Postives = 88/124 (70.97%), Query Frame = -2
Query:  310 GFPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEIQMGVTGVQEKRYKL 681
            G P  QW+ L+EI+AGVC+ MTY EI+K  PEE+  R ++K  YRYP GESY D++QRLEPVI+ELERQ   V+VISHQAV+R L AYF D+   E+P++  PLHTI ++     G + +  KL
Sbjct:  315 GVPYEQWKILNEIDAGVCEEMTYAEIEKRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELERQ-GNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKL 437          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: F264_RAT (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 OS=Rattus norvegicus GN=Pfkfb4 PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 5.720e-31
Identity = 62/108 (57.41%), Postives = 86/108 (79.63%), Query Frame = -2
Query:  352 PKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 675
            P  QW+ L+EI+AGVC+ MTYEEI+ + P E+  R +DK RYRYP+GESY D++QRLEPVI+ELERQ   V+VI HQAV+R L AYF D+  +E+P+++ PLHT++++
Sbjct:  317 PYEQWKVLNEIDAGVCEEMTYEEIQDHYPLEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQE-NVLVICHQAVMRCLLAYFLDKAAEELPYLKCPLHTVLKL 423          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: F264_MOUSE (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 OS=Mus musculus GN=Pfkfb4 PE=2 SV=4)

HSP 1 Score: 134.42 bits (337), Expect = 5.720e-31
Identity = 62/108 (57.41%), Postives = 86/108 (79.63%), Query Frame = -2
Query:  352 PKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 675
            P  QW+ L+EI+AGVC+ MTYEEI+ + P E+  R +DK RYRYP+GESY D++QRLEPVI+ELERQ   V+VI HQAV+R L AYF D+  +E+P+++ PLHT++++
Sbjct:  317 PYEQWKVLNEIDAGVCEEMTYEEIQDHYPLEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQE-NVLVICHQAVMRCLLAYFLDKAAEELPYLKCPLHTVLKL 423          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: YK72_SCHPO (Probable fructose-2,6-bisphosphatase C732.02c OS=Schizosaccharomyces pombe GN=SPAC732.02c PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.757e-31
Identity = 60/107 (56.07%), Postives = 81/107 (75.70%), Query Frame = -2
Query:  352 KIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 672
            K++WRALDE++AG CDG TY+ I++N P E E R  DK  YRY  GESY+DV++RLEP+I+ELERQ   V +I HQA+LR +Y Y+ +  L+E+P I  PLHTII++
Sbjct:  277 KLEWRALDELDAGTCDGFTYDYIEQNFPHEAELRNNDKFHYRYRGGESYMDVVRRLEPIIMELERQ-GDVFIICHQAILRCIYGYYHNLSLEELPFINVPLHTIIKL 382          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: F263_BOVIN (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (Fragment) OS=Bos taurus GN=PFKFB3 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.840e-29
Identity = 62/108 (57.41%), Postives = 81/108 (75.00%), Query Frame = -2
Query:  352 PKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 675
            P  QW+AL+EI+AGVC+ MTYEEIK   PEEY   + DK  YRYP GESY D++QRLEPVI+ELERQ   V+VI HQAV   L AYF D+  +E+P+++ PLH ++++
Sbjct:  315 PYEQWKALNEIDAGVCEEMTYEEIKDTYPEEYALAEADKYYYRYPTGESYQDLVQRLEPVIMELERQE-NVLVICHQAVCVCLLAYFLDKSAEEMPYLKCPLHAVLKL 421          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: F262_BOVIN (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 OS=Bos taurus GN=PFKFB2 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.840e-29
Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = -2
Query:  310 QWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEIQMGVTGVQEKRYKL 666
            QW+ L+EI+AGVC+ MTY EI++  P+E+  R ++K  YRYP GESY D++QRLEPVI+ELERQ   V+VISHQAV+R L AYF D+   E+P++  PLHTI ++     G + +  KL
Sbjct:  321 QWKILNEIDAGVCEEMTYAEIQEQYPDEFALRDEEKYLYRYPGGESYQDLVQRLEPVIMELERQ-GNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKL 438          
The following BLAST results are available for this feature:
BLAST of CF835552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
F263_PONAB8.825e-3259.266-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
F263_HUMAN8.825e-3259.266-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
F26_CAEEL1.505e-3158.65Probable 6-phosphofructo-2-kinase/fructose-2,6-bip... [more]
F262_PONAB4.380e-3154.036-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
F262_HUMAN4.380e-3154.036-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
F264_RAT5.720e-3157.416-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
F264_MOUSE5.720e-3157.416-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
YK72_SCHPO9.757e-3156.07Probable fructose-2,6-bisphosphatase C732.02c OS=S... [more]
F263_BOVIN1.840e-2957.416-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
F262_BOVIN1.840e-2952.946-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_01H11_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835552 ID=CF835552; Name=CF835552; organism=Citrus sinensis; type=EST; length=706bp
TTTCTTTATTCATTTCTTCCCTTTTTTAATACATACACATATTGAATTTG
GGACCCTCTACATTCAATACTGTCCCAGACGTGCCCAACAGTAGCGGAAA
AAAAGGACCGCGAAATGTGATTAATTAGTAAGAGGAGCACTTGGCTTTTG
CCCCACAACTTCATAAAATTTTGGTTATTAGCATTAACATTGGTAACAAT
GAATGACACAGTTGAGTAATGAATTGCGATTCAATCCATCCAAATGTTGA
GTCGCATCGAGTTATAAAGCGACGAACTTCAGAATCCGTTGAAGCAATTT
TTAGTCCATGAGTTTGTATCTTTTCTCTTGGACACCTGTGACGCCCATCT
GTATTTCGATTATTGTATGGAGTGGCGTCTCAATGTGGGGAATTTCTTTG
AGAGGCCTATCAGCAAAATAAGCATATAAAGCTCTCAACACCGCCTGGTG
AGATATCACTACAACTGGTGCTCGTTGTCTTTCAAGTTCAATTATTACAG
GTTCTAGCCTTTGGATAACATCAAGATAAGATTCTCCACGTGGATACCGA
TACCTCAGTTTGTCCTTTTTACGAGCCTCATACTCCTCAGGCATATTTTT
CTTAATCTCTTCATACGTCATTCCATCACACACTCCAGCATTTATCTCAT
CAAGTGCACGCCATTGAATCTTTGGAAATCCGGCAATTGGACTCGCTGTC
AAAATT
back to top