CF835552

Overview
NameCF835552
Unique NameCF835552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: F262_RAT (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 OS=Rattus norvegicus GN=Pfkfb2 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29
Identity = 60/105 (57.14%), Postives = 80/105 (76.19%), Query Frame = -2
Query:  352 QWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 666
            QW+ L+EI+AGVC+ MTY EI++  PEE+  R ++K  YRYP GESY D++QRLEPVI+ELERQ   V+VISHQAV+R L AYF D+   E+P++  PLH I ++
Sbjct:  323 QWKILNEIDAGVCEEMTYSEIEQRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELERQ-GNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHIIFKL 426          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: F262_MOUSE (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 OS=Mus musculus GN=Pfkfb2 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.193e-28
Identity = 59/105 (56.19%), Postives = 80/105 (76.19%), Query Frame = -2
Query:  352 QWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 666
            QW+ L+EI+AGVC+ MTY EI++  PEE+  R ++K  YRYP GESY D++QRLEPVI+ELERQ   ++VISHQAV+R L AYF D+   E+P++  PLH I ++
Sbjct:  323 QWKILNEIDAGVCEEMTYSEIEQRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELERQ-GNILVISHQAVMRCLLAYFLDKGADELPYLRCPLHIIFKL 426          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: 6P21_YEAST (6-phosphofructo-2-kinase 1 OS=Saccharomyces cerevisiae GN=PFK26 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26
Identity = 59/108 (54.63%), Postives = 76/108 (70.37%), Query Frame = -2
Query:  361 FPKIQWRALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYP--RGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTI 678
            +P  Q + LDE++AG  DGMTY EIK N PEE+E R+KDKLRYRYP   GESY+DVI RL PVI ELER    V++I+H+ V RAL  YF +  +  I +++ PLH +
Sbjct:  487 YPIKQMKMLDELSAGDYDGMTYPEIKNNFPEEFEKRQKDKLRYRYPGIGGESYMDVINRLRPVITELERIEDNVLIITHRVVARALLGYFMNLSMGIIANLDVPLHCV 594          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: YIKE_SCHPO (Probable 6-phosphofructo-2-kinase PB17E12.14c OS=Schizosaccharomyces pombe GN=SPAPB17E12.14c PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25
Identity = 59/117 (50.43%), Postives = 79/117 (67.52%), Query Frame = -2
Query:  316 RALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPR--GESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEIQMGVTGVQEKRY 660
            R L+EI +G+CDG+TYEEIK   P+EYEARK DKL YRYP   GESYLDVI RL+ VI+E+ER +  V+VI H+ + R + AYF     ++I ++  PLHT+  I+    G    +Y
Sbjct:  342 RMLNEICSGICDGLTYEEIKSIYPKEYEARKLDKLNYRYPGSGGESYLDVIYRLQSVIVEIERMKHHVLVIGHRVITRIIIAYFLGCRREDIAYLNVPLHTVYCIEPQPYGTDFYQY 458          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: YFMD_SCHPO (Probable 6-phosphofructo-2-kinase C222.13c OS=Schizosaccharomyces pombe GN=SPAC222.13c PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 42/118 (35.59%), Postives = 68/118 (57.63%), Query Frame = -2
Query:  313 RALDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPR--GESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEIQMGVTGVQEKRYK 660
            R L+++N G  +G+T  E  +  P+E++  K+    YR+    GESYLDVI RL+P+I+E+ER    ++V+SH+ V   L  YF +   ++I  +  PLHT+  I+    G     Y+
Sbjct:  455 RLLNDLNLGSREGLTLREFSEKYPDEFDVIKRKDYAYRFSGQGGESYLDVIHRLQPLIVEIERSSGNILVVSHRIVSNILMTYFLNYHPEDIIDVGLPLHTLFCIESDRYGTTCMAYR 572          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: YL345_YEAST (Putative 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase YLR345W OS=Saccharomyces cerevisiae GN=YLR345W PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 36/108 (33.33%), Postives = 63/108 (58.33%), Query Frame = -2
Query:  352 KIQWRA-LDEINAGVCDGMTYEEIKKNMPEEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEI 672
            K+Q R+ L ++N G    +T ++I    P EY+   KD   +R+PR ESY D+  R+EP+++E+E     +++I+H++ LR LY Y       E+P++      ++EI
Sbjct:  384 KVQQRSELRQLNPGSIADLTDQQIMDKFPSEYKESLKDPYHFRFPRAESYHDLAVRMEPLLLEMEHTSKDILIIAHESTLRVLYGYLMACTCVELPNLNFTRDKLVEI 491          
BLAST of CF835552 vs. ExPASy Swiss-Prot
Match: YIVH_SCHPO (Putative 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase C144.17c OS=Schizosaccharomyces pombe GN=SPAC144.17c PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11
Identity = 34/93 (36.56%), Postives = 53/93 (56.99%), Query Frame = -2
Query:  310 EEYEARKKDKLRYRYPRGESYLDVIQRLEPVIIELERQRAPVVVISHQAVLRALYAYFADRPLKEIPHIETPLHTIIEIQMGVTGVQEKRYKL 588
            EEY     D  RYR  R ES+ D+  RLEP+I+EL R++  V++I  ++++R  Y Y+ + P K+IP +     +I E+    TG+    Y L
Sbjct:  357 EEYNLYLVDPYRYRVKRKESFYDLAVRLEPLILELGREQRDVLLIGSKSIIRVFYGYYMNVPAKDIPQLCLSSSSIYELIESSTGMTVNEYDL 449          
The following BLAST results are available for this feature:
BLAST of CF835552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
F262_RAT9.132e-2957.146-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
F262_MOUSE1.193e-2856.196-phosphofructo-2-kinase/fructose-2,6-biphosphatas... [more]
6P21_YEAST9.450e-2654.636-phosphofructo-2-kinase 1 OS=Saccharomyces cerevi... [more]
YIKE_SCHPO2.105e-2550.43Probable 6-phosphofructo-2-kinase PB17E12.14c OS=S... [more]
YFMD_SCHPO3.369e-1535.59Probable 6-phosphofructo-2-kinase C222.13c OS=Schi... [more]
YL345_YEAST1.415e-1333.33Putative 6-phosphofructo-2-kinase/fructose-2,6-bip... [more]
YIVH_SCHPO8.587e-1136.56Putative 6-phosphofructo-2-kinase/fructose-2,6-bip... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01H11_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835552 ID=CF835552; Name=CF835552; organism=Citrus sinensis; type=EST; length=706bp
TTTCTTTATTCATTTCTTCCCTTTTTTAATACATACACATATTGAATTTG
GGACCCTCTACATTCAATACTGTCCCAGACGTGCCCAACAGTAGCGGAAA
AAAAGGACCGCGAAATGTGATTAATTAGTAAGAGGAGCACTTGGCTTTTG
CCCCACAACTTCATAAAATTTTGGTTATTAGCATTAACATTGGTAACAAT
GAATGACACAGTTGAGTAATGAATTGCGATTCAATCCATCCAAATGTTGA
GTCGCATCGAGTTATAAAGCGACGAACTTCAGAATCCGTTGAAGCAATTT
TTAGTCCATGAGTTTGTATCTTTTCTCTTGGACACCTGTGACGCCCATCT
GTATTTCGATTATTGTATGGAGTGGCGTCTCAATGTGGGGAATTTCTTTG
AGAGGCCTATCAGCAAAATAAGCATATAAAGCTCTCAACACCGCCTGGTG
AGATATCACTACAACTGGTGCTCGTTGTCTTTCAAGTTCAATTATTACAG
GTTCTAGCCTTTGGATAACATCAAGATAAGATTCTCCACGTGGATACCGA
TACCTCAGTTTGTCCTTTTTACGAGCCTCATACTCCTCAGGCATATTTTT
CTTAATCTCTTCATACGTCATTCCATCACACACTCCAGCATTTATCTCAT
CAAGTGCACGCCATTGAATCTTTGGAAATCCGGCAATTGGACTCGCTGTC
AAAATT
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