CF835563

Overview
NameCF835563
Unique NameCF835563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835563 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.333e-28
Identity = 78/202 (38.61%), Postives = 112/202 (55.45%), Query Frame = 2
Query:   20 NSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGDENEXXXXXXXXXXXXXXLVRRVLSGSGTPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQV 625
            NSYPPS GSF++D       P++ FLR T + L+VN YP+F+YS N  +ISL Y+LF   P  V      +Y NLFDA LD+V+AA+       V +VV+E+GWPS G                  L++    GS  P +P  P+  Y+FA+F+EN K  P  E+++GLF PN+Q  Y+  F  + G   S+   N + + +
Sbjct:  175 NSYPPSQGSFRNDA-RWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTA-PNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAG---AFGATYDNAATYLRNLIQHAKEGS--PRKP-GPIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNLNFGVSGGVWDSSVETNATASLI 367          
BLAST of CF835563 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.275e-28
Identity = 81/184 (44.02%), Postives = 105/184 (57.07%), Query Frame = 2
Query:   20 NSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQV--DSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGDENEXXXXXXXXXXXXXXLVRRVLSGSGTPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPF 565
            NS+PPS GSF+SD +   L P + +L    + L+VN YP+F++  N   ISL YALF  +PG +  D  NG  Y NLFDA LD+V AA+       V VVV+E+GWPS G                  L+R V  G GTP RP      YLFA+F+ENQK  P  E+++G+FYPN+Q  Y   F
Sbjct:  174 NSFPPSKGSFRSD-VRSYLDPFIGYLVYAGAPLLVNVYPYFSHIGNPRDISLPYALFT-SPGVMVQDGPNG--YQNLFDAMLDSVHAALDNTGIGWVNVVVSESGWPSDGGS---ATSYDNARIYLDNLIRHV--GKGTPRRPW-ATEAYLFAMFDENQK-SPELEKHFGVFYPNKQKKYPFGF 346          
BLAST of CF835563 vs. ExPASy Swiss-Prot
Match: E13E_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GGIB50 OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.067e-28
Identity = 78/202 (38.61%), Postives = 112/202 (55.45%), Query Frame = 2
Query:   20 NSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGDENEXXXXXXXXXXXXXXLVRRVLSGSGTPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVSTSGNSSSTPAANKSKTQV 625
            NSYPPS GSF++D     +  ++ FLR T + L+VN YP+F+YS N  +ISL Y+LF   P  V      +Y NLFDA LD+V+AA+       V +VV+E+GWPS G                  L++    GS  P +P  P+  Y+FA+F+EN K  P  E+++GLF PN+Q  Y+  F  + G   S+   N + + V
Sbjct:  175 NSYPPSQGSFRNDA-RWFVDAIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSLFTA-PNVVVQDGSRQYRNLFDAMLDSVYAALERSGGASVGIVVSESGWPSAG---AFGATYDNAATYLRNLIQHAKEGS--PRKP-GPIETYIFAMFDENNK-NPELEKHFGLFSPNKQPKYNINFGVSGGVWDSSVETNATASLV 367          
BLAST of CF835563 vs. ExPASy Swiss-Prot
Match: E13A_ARATH (Glucan endo-1,3-beta-glucosidase, acidic isoform OS=Arabidopsis thaliana GN=BG2 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.067e-28
Identity = 71/179 (39.66%), Postives = 104/179 (58.10%), Query Frame = 2
Query:   29 PPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGDENEXXXXXXXXXXXXXXLVRRVLSGSGTPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPF 565
            PPS G F+ D  +  L+P++ FL    S L+VN YP+F+Y  +   I LDYALF      VD+  G  Y NLFDA LD+V+AA+       +++VV+ETGWP+   E                L++ V +GS  P RP   +  Y+FA+F+EN+K+ PT E+ +GLF+P+ Q+ Y+  F
Sbjct:  168 PPSQGRFR-DEYKSFLEPVIGFLASKQSPLLVNLYPYFSYMGDTANIHLDYALFTAQ-STVDNDPGYSYQNLFDANLDSVYAALEKSGGGSLEIVVSETGWPT---EGAVGTSVENAKTYVNNLIQHVKNGS--PRRPGKAIETYIFAMFDENKKE-PTYEKFWGLFHPDRQSKYEVNF 338          
BLAST of CF835563 vs. ExPASy Swiss-Prot
Match: E13K_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.643e-28
Identity = 64/186 (34.41%), Postives = 102/186 (54.84%), Query Frame = 2
Query:    8 GALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGDENEXXXXXXXXXXXXXXLVRRVLSGSGTPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPF 565
            G L N+YPP    F+ +  +  + P+++FL + +  L+ N YP+F + +N   +SL YALF          N   Y NLFDA LD+++ A+      +V+++V+E+GWPS G                  L+  V SG+GTP +P   +  YLFA+F+EN K G  +E+++GLF P+++  Y   F
Sbjct:  146 GVLANTYPPERSIFREEF-KSFINPIIQFLARNNLPLLANVYPYFVHVSNTADVSLSYALFTQQ-----GTNSAGYQNLFDAILDSMYFAVEKAGGPNVEIIVSESGWPSEGSS---AATIENAQTYYRNLINHVKSGAGTPKKPGKTIETYLFAMFDENDKIGEITEKHFGLFSPDQRAKYQLNF 322          
BLAST of CF835563 vs. ExPASy Swiss-Prot
Match: E13I_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-N (Fragment) OS=Nicotiana tabacum GN=PRN PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.284e-27
Identity = 63/186 (33.87%), Postives = 101/186 (54.30%), Query Frame = 2
Query:    8 GALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGDENEXXXXXXXXXXXXXXLVRRVLSGSGTPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPF 565
            G L N+YPP    F+ +     + P+++FL + +  L+ N YP+F +  N   + L YALF          N   Y NLFDA LD+++ A+      +V+++V+E+GWPS G+                 L+  V SG+GTP +P   +  YLFA+F+EN K+G  +E+++GLF P+++  Y   F
Sbjct:   98 GILANTYPPKDSIFRGEF-NSFINPIIQFLVQHNLPLLANVYPYFGHIFNTADVPLSYALFTQQ-----EANPAGYQNLFDALLDSMYFAVEKAGGQNVEIIVSESGWPSEGNS---AATIENAQTYYENLINHVKSGAGTPKKPGKAIETYLFAMFDENNKEGDITEKHFGLFSPDQRAKYQLNF 274          
BLAST of CF835563 vs. ExPASy Swiss-Prot
Match: E13G_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 OS=Nicotiana tabacum GN=PR2 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.284e-27
Identity = 63/186 (33.87%), Postives = 101/186 (54.30%), Query Frame = 2
Query:    8 GALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGDENEXXXXXXXXXXXXXXLVRRVLSGSGTPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPF 565
            G L N+YPP    F+ +     + P+++FL + +  L+ N YP+F +  N   + L YALF          N   Y NLFDA LD+++ A+      +V+++V+E+GWPS G+                 L+  V SG+GTP +P   +  YLFA+F+EN K+G  +E+++GLF P+++  Y   F
Sbjct:  166 GILANTYPPKDSIFRGEF-NSFINPIIQFLVQHNLPLLANVYPYFGHIFNTADVPLSYALFTQQ-----EANPAGYQNLFDALLDSMYFAVEKAGGQNVEIIVSESGWPSEGNS---AATIENAQTYYENLINHVKSGAGTPKKPGKAIETYLFAMFDENNKEGDITEKHFGLFSPDQRAKYQLNF 342          
BLAST of CF835563 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.317e-27
Identity = 74/186 (39.78%), Postives = 106/186 (56.99%), Query Frame = 2
Query:    8 GALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGDENEXXXXXXXXXXXXXXLVRRVLSGSGTPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPF 565
            G   ++ PPS+G FK D +   ++P++ FL    + L+VN YP+FA + NAD I L+YALF  +   V+  NG  Y NLFDA LDA ++A+   S + +++VV+E+GWPS G                  L+  V  GS  P RP  P+  Y+FALF+E+QK  P  E+++GLF  N Q  Y   F
Sbjct:  161 GLTTDTSPPSNGRFKDD-VRQFIEPIINFLVTNRAPLLVNLYPYFAIANNAD-IKLEYALFTSSEVVVND-NGRGYRNLFDAILDATYSALEKASGSSLEIVVSESGWPSAGAGQ--LTSIDNARTYNNNLISHVKGGS--PKRPSGPIETYVFALFDEDQKD-PEIEKHFGLFSANMQPKYQISF 338          
BLAST of CF835563 vs. ExPASy Swiss-Prot
Match: E13L_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 OS=Nicotiana tabacum GN=GGL4 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.556e-27
Identity = 63/188 (33.51%), Postives = 103/188 (54.79%), Query Frame = 2
Query:    8 GALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGDENEXXXXXXXXXXXXXXLVRRVLSGSGTPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPFVS 571
            G L N+YPP +  F+ +     + P+++FL + +  L+ N YP+F + +N   + L YALF          N   Y NLFDA LD+++ A+      +V+++V+E+GWPS G+                 L+  V  G+GTP +P   +  YLFA+F+EN K+G  +E+++GLF P+++  Y   F S
Sbjct:  166 GLLANTYPPKASIFRGEF-NSFINPIIQFLAQNNLPLLANVYPYFVHISNTADVPLSYALFTQR-----GKNSAGYQNLFDAILDSMYFAVEKAGGPNVEIIVSESGWPSEGNS---AATIENAQTYYRNLIDHVKRGAGTPKKPGKSIETYLFAMFDENVKKGEITEKHFGLFSPDQRAKYQLNFNS 344          
BLAST of CF835563 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.631e-26
Identity = 65/187 (34.76%), Postives = 106/187 (56.68%), Query Frame = 2
Query:    5 LGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGDENEXXXXXXXXXXXXXXLVRRVLSGSGTPLRPKDPLNVYLFALFNENQKQGPTSERNYGLFYPNEQTVYDSPF 565
            LG L N+YPP    F+ D  +  + P++ FL + +  L+ N YP+F ++   D + L YALF+   G  D+G    Y NLFDA +D+++ A   +   +++++V+E+GWPS G  +               L+  V  G+GTP +P   +  YLFA+F+EN+K G  SE+++GLF P+++  Y   F
Sbjct:  160 LGLLTNTYPPRDSIFR-DEYKSFINPIIGFLSRHNLPLLANIYPYFGHAD--DNVPLPYALFKQQ-GLNDAG----YQNLFDALVDSMYFATEKLGGQNIEIIVSESGWPSEGHPSATLENAMTYYTN---LINHVKGGAGTPKKPGRTIETYLFAMFDENRKDGKPSEQHFGLFKPDQRPKYQLKF 335          
The following BLAST results are available for this feature:
BLAST of CF835563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
E13F_TOBAC1.333e-2838.61Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_PEA2.275e-2844.02Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]
E13E_TOBAC5.067e-2838.61Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13A_ARATH5.067e-2839.66Glucan endo-1,3-beta-glucosidase, acidic isoform O... [more]
E13K_TOBAC8.643e-2834.41Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13I_TOBAC3.284e-2733.87Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13G_TOBAC3.284e-2733.87Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13H_TOBAC7.317e-2739.78Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
E13L_TOBAC9.556e-2733.51Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13A_SOLLC3.631e-2634.76Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01H20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835563 ID=CF835563; Name=CF835563; organism=Citrus sinensis; type=EST; length=650bp
TGCTTTAGGTGCCTTACAAAATTCGTACCCGCCATCTTCCGGGTCGTTCA
AATCGGATCTCATCGAGCCCGCTTTGAAACCCATGTTGGAGTTTCTACGT
AAGACGTCGTCGTATCTCATGGTTAATGCGTATCCTTTTTTCGCCTACTC
TGCTAACGCGGATAAGATATCTTTAGACTACGCTCTGTTTAGGGATAATC
CCGGTCAGGTGGATTCAGGTAACGGGCTGAAGTATAGTAACCTTTTTGAC
GCCCAACTCGACGCCGTTTTCGCTGCCATGTCAGCAATCAGTTATAACGA
CGTGAAGGTTGTGGTGACGGAGACTGGATGGCCGTCTATGGGTGACGAGA
ATGAGGCGGGTGCTGGTGCGGCCAATGCCGCGGCGTACAACGGGAATCTA
GTACGTAGAGTCTTGTCTGGAAGTGGGACCCCCTTGAGACCAAAGGACCC
ACTTAACGTTTACCTCTTCGCTTTGTTCAATGAGAATCAAAAACAGGGTC
CCACATCGGAAAGGAATTACGGGTTGTTTTATCCCAACGAACAGACGGTG
TACGACTCGCCGTTTGTGTCAACTAGTGGGAACTCAAGCTCAACGCCGGC
AGCCAATAAGAGCAAGACTCAAGTTCCGGTGAGCGGAGGAGGAGGTGGTG
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