CF835577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 266.159 bits (679), Expect = 1.556e-70 Identity = 126/164 (76.83%), Postives = 141/164 (85.98%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L +YAPVISA KA HE SV E+T S FEP++ M KCDPRHGKYMA CL+YRGDVVP D +AAVAT+KTKRTIQFVDWCPTGFK GI YQPP VP GDLAKV RAVCM+SN+T++AE +S + KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY Sbjct: 269 LVAYAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDY 432
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA1_SCHPO (Tubulin alpha-1 chain OS=Schizosaccharomyces pombe GN=nda2 PE=2 SV=2) HSP 1 Score: 264.233 bits (674), Expect = 5.914e-70 Identity = 120/164 (73.17%), Postives = 142/164 (86.59%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L +Y+P++SA KA+HE SV EITN FEP + M KCDPR G+YMA CL+YRGDV+P+DV AAV +IK++RTIQFVDWCPTGFK GI Y+PP VPG +AKV RAVCM+SN+TS+AE +SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY Sbjct: 273 LVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDY 436
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 7.723e-70 Identity = 121/164 (73.78%), Postives = 143/164 (87.20%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L++ AP++S +KA HE SVAE+T S FEP + M KCDPR GKYMAC L+YRGDVVPKD NAAVA IKTKRTIQFVDWCPTGFK GI +PP VPGGDLAKV+R++CM+SN+T+++ +SR+DHKFDL+Y+KRAFVHWYVGEGMEEGEFSEAR+DLAALEKDY Sbjct: 268 LATLAPIVSVDKAGHESNSVAEMTYSCFEPGNQMVKCDPRDGKYMACALLYRGDVVPKDTNAAVALIKTKRTIQFVDWCPTGFKLGICNEPPAHVPGGDLAKVKRSMCMLSNTTAISSAWSRLDHKFDLLYSKRAFVHWYVGEGMEEGEFSEARQDLAALEKDY 431
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 262.692 bits (670), Expect = 1.721e-69 Identity = 113/164 (68.90%), Postives = 146/164 (89.02%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 ++++AP++SA+KAYHEQ SV++IT + FE S+ + KCDPR GKYMACCL+YRGDVVPK+VNAA+A K++ ++QFVDWCPTGFK GIN +PPTV+PGGDLAKV R++CM+SN+T++ E ++R+DHKFDLMYAKRAF+HWY+ EGMEE EF EAREDLAALE+DY Sbjct: 276 MTAFAPIVSADKAYHEQFSVSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGMEEAEFLEAREDLAALERDY 439
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 261.922 bits (668), Expect = 2.935e-69 Identity = 119/164 (72.56%), Postives = 143/164 (87.20%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L++YAPVISA++A+HE LSV +IT+ FE ++ M KCDP GKYMA CL+YRGDVVPKDVNAA++++K KR I FVDWCPTGFK GINYQ P V GGDLAKV RAVCM+SN+T++AE ++R+DHKFDLMY+KRAFVHW+VGEGMEEGEF EAR+DLAALEKDY Sbjct: 272 LATYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDY 435
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2) HSP 1 Score: 261.151 bits (666), Expect = 5.006e-69 Identity = 120/164 (73.17%), Postives = 140/164 (85.37%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L +YAP++SA KA+HE SV EITN FEP + M KCDPR G+YMA CL+YRGDV+P+DV AAV TIK KRTIQFVDWCPTGFK GI +PP + G ++AKV RAVCM+SN+TS+AE +SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY Sbjct: 269 LVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDY 432
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2) HSP 1 Score: 259.225 bits (661), Expect = 1.902e-68 Identity = 123/164 (75.00%), Postives = 140/164 (85.37%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L +Y+PVISA KA HE SV E+T S FEP++ M KCDPRHGKYMA CL+YRGDVVP D +AAVAT+KTKRTIQFVDWCPTGFK GI YQ P VP GDLAKV RAVCM+SN+T++AE +S + KFDLM++KRAFVHWYVGEGMEEGEFSEAREDLAALE+DY Sbjct: 269 LVAYSPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQAPENVPNGDLAKVSRAVCMLSNTTAIAEAWSSLSLKFDLMHSKRAFVHWYVGEGMEEGEFSEAREDLAALERDY 432
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 7.229e-68 Identity = 123/164 (75.00%), Postives = 138/164 (84.15%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L +YAPVISA KA HE SV E+T S FEP++ M KCDPRHGKYMA CL+Y GDVVP D +AAVA++KTKRTIQFVDWCPTGFK GI YQPP VP GDLAKV RAVCM+SN+T++AE +S + KFDLMY+KRAFVHWYVGEGMEEGEFSEARE LAALE DY Sbjct: 269 LVAYAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYGGDVVPNDAHAAVASLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEGMEEGEFSEAREVLAALEADY 432
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.781e-66 Identity = 117/164 (71.34%), Postives = 138/164 (84.15%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L+SYAP++SA + HEQ SV E+T S FE + M KCD + GKYMACCL+YRGDVVPKD AAVA+IKTKRTIQFVDWCPTGFK G+ + P VPGGDLAKV R++CM+SN+T++A ++R+D+KFDLMY KRAFVHWYVGE MEEGEFSEAREDLAALEKDY Sbjct: 267 LASYAPLLSAPRRQHEQNSVEEMTFSCFESGNQMVKCDAKDGKYMACCLLYRGDVVPKDTQAAVASIKTKRTIQFVDWCPTGFKLGVCNEAPATVPGGDLAKVPRSLCMLSNTTAIAAAWNRLDYKFDLMYRKRAFVHWYVGEAMEEGEFSEAREDLAALEKDY 430
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA1_YEAST (Tubulin alpha-1 chain OS=Saccharomyces cerevisiae GN=TUB1 PE=1 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 1.781e-66 Identity = 116/164 (70.73%), Postives = 134/164 (81.71%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L SY+PV+S KA+HE SV+EITN+ FEP + M KCDPR GKYMA CL+YRGDVV +DV AV +K K+T+Q VDWCPTGFK GI Y+PPT P LA V RAVCM+SN+TS+AE + RID KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALE+DY Sbjct: 270 LVSYSPVLSKSKAFHESNSVSEITNACFEPGNQMVKCDPRDGKYMATCLLYRGDVVTRDVQRAVEQVKNKKTVQLVDWCPTGFKIGICYEPPTATPNSQLATVDRAVCMLSNTTSIAEAWKRIDRKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALERDY 433 The following BLAST results are available for this feature:
BLAST of CF835577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835577 ID=CF835577; Name=CF835577; organism=Citrus sinensis; type=EST; length=803bpback to top |