CF835577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 5.180e-66 Identity = 114/164 (69.51%), Postives = 134/164 (81.71%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L SYAP++S KA+HE SV EITN+ FEP + M KCDPR GKYMA CL+YRGDVV +DV AVA +K K+T+Q VDWCPTGFK GI Y+PPT P L+ V RAVCM+SN+T++A+ + RID KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALE+DY Sbjct: 271 LVSYAPILSKSKAHHESNSVGEITNACFEPGNQMVKCDPRVGKYMATCLLYRGDVVTRDVQTAVAQVKNKKTVQLVDWCPTGFKIGICYEPPTATPNSQLSSVSRAVCMLSNTTAIADAWKRIDRKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALERDY 434
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.358e-65 Identity = 115/164 (70.12%), Postives = 134/164 (81.71%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L SYAPV S +A HE SV+EIT S FEP + M KCDPR GKYMA CL+YRGDVV +DV AVA +K+K+T+Q VDWCPTGFK GI YQPPT + G +LA RAVCM+SN+T++AE + RID KFDLMY+KRAFVHWYVGEGMEEGEF+EAREDLAALE+DY Sbjct: 270 LVSYAPVFSKSRATHEANSVSEITQSCFEPGNQMVKCDPRTGKYMATCLLYRGDVVTRDVQNAVAQVKSKKTVQLVDWCPTGFKIGICYQPPTAIKGSELASASRAVCMLSNTTAIAEAWRRIDRKFDLMYSKRAFVHWYVGEGMEEGEFTEAREDLAALERDY 433
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA4_DROME (Tubulin alpha-4 chain OS=Drosophila melanogaster GN=alphaTub67C PE=1 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.358e-65 Identity = 110/164 (67.07%), Postives = 139/164 (84.76%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L +YAP++SAE++ HEQ ++ +TN+ FE S+MM KCDPR GK+MACC++YRGDVVPKDVNAAV+ IK+KR IQFVDWCPTGFK GINY+ P VP GDLAK RA CM+SN+T+++ FS + +KFDLM+ KRAFVHWYVGEGMEEGEF+EARE++A LE+D+ Sbjct: 280 LVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDF 443
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 5.728e-65 Identity = 112/164 (68.29%), Postives = 136/164 (82.93%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L SYAP++S ++A HE SV+EITN+ FEP + M KCDP GKYMA CL+YRGDVV +DV AV +K K+T+Q VDWCPTGFK GI Y+PP+V+P +LA V RAVCM+SN+T++A+ + RID KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALE+DY Sbjct: 270 LVSYAPILSKKRATHESNSVSEITNACFEPGNQMVKCDPTKGKYMANCLLYRGDVVTRDVQRAVEQVKNKKTVQMVDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWKRIDQKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALERDY 433
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBAA_PNECA (Tubulin alpha chain (Fragment) OS=Pneumocystis carinii GN=TUB-A PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.143e-63 Identity = 112/147 (76.19%), Postives = 128/147 (87.07%), Query Frame = -1 Query: 360 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEE 800 L +YAPVISA KA HE SV+EITN+ FEP++ M KCDPR+GKYMA CL+YRGDVV KDVNAAVA ++TKRTIQFVDWCPTGFK G+ YQPP VP GDLAKV RAVCM+SN+TS+AE + R+DHKFDLMY+KRAFVHWYVGEGMEE Sbjct: 66 LVTYAPVISAAKAVHEANSVSEITNACFEPNNQMVKCDPRNGKYMATCLLYRGDVVTKDVNAAVAAVRTKRTIQFVDWCPTGFKLGVCYQPPQHVPHGDLAKVDRAVCMLSNTTSIAEAWPRLDHKFDLMYSKRAFVHWYVGEGMEE 212
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA_ENCCU (Tubulin alpha chain OS=Encephalitozoon cuniculi GN=TUB1 PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.725e-61 Identity = 107/164 (65.24%), Postives = 135/164 (82.32%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L +Y+P++S EKA HE+LSV EITN+ FEP + M +CD R GKYMACCL++RGDV PK+ N A A +K KRT QFV+WCPTGFK GIN + PTV+ G +A+V RAVC +SN+T+++E + R+++KFDLM++KRAFVHWYVGEGMEEGEFSEAREDLA LE DY Sbjct: 265 LVAYSPMLSKEKAAHEKLSVQEITNACFEPQNQMVRCDTRKGKYMACCLLFRGDVNPKEANNATANVKAKRTNQFVEWCPTGFKVGINSRKPTVLDGEAMAEVSRAVCALSNTTAISEAWKRLNNKFDLMFSKRAFVHWYVGEGMEEGEFSEAREDLAMLEDDY 428
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.248e-60 Identity = 105/167 (62.87%), Postives = 135/167 (80.84%), Query Frame = -1 Query: 309 MLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK--RTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 803 +L SYAPVIS EKA+HE ++V IT++ F ++MAKC P GKYMACCLMYRGD+VPK+ AV I+++ R + FVDW PTGFKCGIN Q P ++A+V+++VCM+SN+T++++VFSRI+HKFDLM+ KRAFVHWYVGEGMEEGEF+EAR+DL ALEKDY Sbjct: 275 VLCSYAPVISREKAHHETITVDNITSAVFSEKNIMAKCQPNLGKYMACCLMYRGDIVPKEAQKAVQNIRSEKSRNVSFVDWSPTGFKCGINNQAPVSTKDSEMAEVKKSVCMLSNTTAISQVFSRINHKFDLMFVKRAFVHWYVGEGMEEGEFAEARDDLLALEKDY 441
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 231.491 bits (589), Expect = 4.248e-60 Identity = 110/169 (65.09%), Postives = 132/169 (78.11%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVP-----GGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L SYAPVISA K+ HE +E+T FEP++ M CDPR+GKYMA L+YRGDVVP+D +AAVA +K K + V+WCPTGFK GIN+Q P VP G LA V R+V M+SN+T++AE +SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLA+LEKDY Sbjct: 270 LISYAPVISATKSAHESFKTSELTLQCFEPNNQMVVCDPRNGKYMAVALLYRGDVVPRDTSAAVAALKAKSSFNLVEWCPTGFKIGINHQKPMSVPTASPADGGLASVDRSVSMLSNTTAIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLASLEKDY 438
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 7.246e-60 Identity = 105/164 (64.02%), Postives = 130/164 (79.27%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 L SYAPVIS+ ++ HE V ++T EP++ M CDPR+GKYMA L+YRGD VP+D A+A++K K + V+WCPTGFK GINYQ P VPG +LA V R+V M+SN+T+++E +SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDY Sbjct: 271 LISYAPVISSNRSSHESFKVQDLTLQCAEPNNQMVVCDPRNGKYMAVALLYRGDCVPRDCTQAIASLKAKASFNLVEWCPTGFKVGINYQKPARVPGSELAPVDRSVSMLSNTTAISEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 434
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.976e-58 Identity = 105/150 (70.00%), Postives = 127/150 (84.67%), Query Frame = -1 Query: 351 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF 800 L+SY+PV+SA KA HE SV E+T FEP++ M KCDPR+GKYMA CL+YRGDVVPKDV+A AT+KTKRT+QFVD PTGFK GI YQPPT+VP GDLAKV RA CM+SN+T+++E ++ + HKFDL+Y+KRAFVHWYVGEGMEEGEF Sbjct: 270 LASYSPVVSAGKASHESNSVMEVTIVCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKDVHAVAATLKTKRTVQFVDLQPTGFKIGICYQPPTMVPNGDLAKVNRA-CMLSNTTAISEAWTALSHKFDLIYSKRAFVHWYVGEGMEEGEF 418 The following BLAST results are available for this feature:
BLAST of CF835577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835577 ID=CF835577; Name=CF835577; organism=Citrus sinensis; type=EST; length=803bpback to top |