CF835577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB2_ANEPH (Tubulin beta-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBB2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.568e-25 Identity = 55/161 (34.16%), Postives = 88/161 (54.66%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S + L+V E+T + +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP ++ A I NSTS+ E+F R+ +F M+ +AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 238 FAPLTSRGSQQYRALTVPELTQQMRDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------VGLKMACTFIGNSTSIQEMFRRVRDQFTAMFRXKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 390
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_TRYCR (Tubulin beta chain OS=Trypanosoma cruzi PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 52/164 (31.71%), Postives = 90/164 (54.88%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 + +AP+ S + LSV ++T F+ +MM DP HG+Y+ ++RG + K+V+ + ++ K + F++W P K I PP ++ AV + N+T + E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 267 MMGFAPLSSRGSQQYRGLSVPDVTQQMFDAKNMMQAADPAHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFIEWIPNNIKSSICDIPP--------KGLKMAVTFVGNNTCIQEMFRRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_PNECA (Tubulin beta chain OS=Pneumocystis carinii GN=TUB-B PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 55/161 (34.16%), Postives = 90/161 (55.90%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S L+V E+T F+ +MMA DPRHG+Y+ ++RG V K+V + +++ K + FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSKGSHSFRSLTVPELTQQMFDAKNMMAASDPRHGRYLTVAAIFRGRVSMKEVEDQMHSVQQKNSSYFVEWIPNNVQTALCSIPPR--------GLKMSSTFIGNSTSIQELFKRVGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_NEUCR (Tubulin beta chain OS=Neurospora crassa GN=tub-2 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 54/161 (33.54%), Postives = 91/161 (56.52%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S + +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP ++ + + NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSRGAHHFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPNNVQTALCSIPP--------RGLKMSSTFVGNSTAIQELFKRIGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_GIBZE (Tubulin beta chain OS=Gibberella zeae GN=TUB2 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 55/161 (34.16%), Postives = 90/161 (55.90%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + +++K + FV+W P + + PP + + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGRVAMKEVEDQMRNVQSKNSSYFVEWIPNNIQTALCAIPP--------RGLTMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_CANAL (Tubulin beta chain OS=Candida albicans GN=TUB2 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 55/161 (34.16%), Postives = 88/161 (54.66%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 YAP+ S ++V E+T F+ +MMA DPR+G+Y+ +RG V K+V+ + I+T+ + FVDW P + + PP + + I NSTS+ E+F R+ +F M+ ++AF+HWY EGM+E EF+EA ++ L +Y Sbjct: 270 YAPLTSMGSKSFRSVTVPELTQQMFDAKNMMAASDPRNGRYLTVAAFFRGKVSVKEVDDEMHKIQTRNSSYFVDWIPNNVQTAVCSVPP--------KDLDMSATFIGNSTSIQELFKRVGDQFSAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_ASPPA (Tubulin beta chain OS=Aspergillus parasiticus GN=benR PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 56/161 (34.78%), Postives = 90/161 (55.90%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + I++K FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQTYFVEWIPNNIQTALCSIPP--------RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_ASPOR (Tubulin beta chain OS=Aspergillus oryzae GN=benA56 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 56/161 (34.78%), Postives = 90/161 (55.90%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + I++K FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQTYFVEWIPNNIQTALCSIPP--------RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_ASPFL (Tubulin beta chain OS=Aspergillus flavus PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 56/161 (34.78%), Postives = 90/161 (55.90%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + I++K FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQTYFVEWIPNNIQTALCSIPP--------RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB8_ORYSJ (Tubulin beta-8 chain OS=Oryza sativa subsp. japonica GN=TUBB8 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 53/161 (32.92%), Postives = 88/161 (54.66%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S + L+V E+T ++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + A + NSTS+ E+F R+ +F M+ ++AF+HWY EGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------VGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEY 422 The following BLAST results are available for this feature:
BLAST of CF835577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835577 ID=CF835577; Name=CF835577; organism=Citrus sinensis; type=EST; length=803bpback to top |