CF835577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB3_GOSHI (Tubulin beta-3 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.884e-25 Identity = 53/161 (32.92%), Postives = 87/161 (54.04%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S + L+V E+T ++ +MM DPRHG+Y+ M+RG + K+ + + ++ K + FV+W P K + PP + A + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L Y Sbjct: 270 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEADEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSGY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_RHYSE (Tubulin beta chain OS=Rhynchosporium secalis PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.291e-24 Identity = 55/161 (34.16%), Postives = 91/161 (56.52%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S ++V E+T F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W PT + + PP ++ + + NSTS+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPTNVQTALCSIPP--------RGLKMSSTFVGNSTSIQELFKRIGDQFTRMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_GIBFU (Tubulin beta chain OS=Gibberella fujikuroi GN=TUB2 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.291e-24 Identity = 55/161 (34.16%), Postives = 89/161 (55.28%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + ++ K + FV+W P + + PP + + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGRVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPP--------RGLTMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB2_COLGR (Tubulin beta-2 chain OS=Colletotrichum graminicola GN=TUB2 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.291e-24 Identity = 54/161 (33.54%), Postives = 89/161 (55.28%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V KDV + + K + FV+W P + + PP ++ + + NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKDVEDQMRNVLNKNSSYFVEWIPNNVQTALCSIPP--------RGLKMSFTFVGNSTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB1_EMENI (Tubulin beta-1 chain OS=Emericella nidulans GN=benA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.291e-24 Identity = 56/161 (34.78%), Postives = 90/161 (55.90%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S +SV E+T F+P +MMA D R+G+Y+ C ++RG V K+V + I++K FV+W P + + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSRGAYSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNIQSKNQSYFVEWIPNNIQTALCSIPP--------RGLKMSSTFIGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_POLAG (Tubulin beta chain OS=Polytomella agilis GN=TUBB1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.686e-24 Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 + P+ S + L+V E+T ++ +MM DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP ++ + I NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_CHLRE (Tubulin beta-1/beta-2 chain OS=Chlamydomonas reinhardtii GN=TUBB1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.686e-24 Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 + P+ S + L+V E+T ++ +MM DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP ++ + I NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB_CHLIN (Tubulin beta chain OS=Chlamydomonas incerta GN=TUBB PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.686e-24 Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 + P+ S + L+V E+T ++ +MM DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP ++ + I NST++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 270 FTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPK--------GLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB8B_HUMAN (Tubulin beta-8 chain B OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.686e-24 Identity = 53/164 (32.32%), Postives = 91/164 (55.49%), Query Frame = -1 Query: 309 LSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 800 + +AP+ S + L+VAE+T F+ +MMA CDPRHG Y+ ++RG + ++V+ + I+ K + F DW P K + PP ++ + I N+ ++ E+F+ + +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y Sbjct: 267 MPGFAPLTSRGSQQYRALTVAELTQQMFDAKNMMAACDPRHGCYLTVAAIFRGRMPMREVDEQMFNIQDKNSSYFADWFPDNVKTAVCDIPP--------RGLKMSATFIGNNAAIQELFTCVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY 422
BLAST of CF835577 vs. ExPASy Swiss-Prot
Match: TBB3_MAIZE (Tubulin beta-3 chain OS=Zea mays GN=TUBB3 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.686e-24 Identity = 52/161 (32.30%), Postives = 88/161 (54.66%), Query Frame = -1 Query: 309 YAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 791 +AP+ S + L+V E+T ++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP + + + NSTS+ E+F R+ +F M+ ++AF+HWY EGM+E EF+EA ++ L +Y Sbjct: 270 FAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------VGLSMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEY 422 The following BLAST results are available for this feature:
BLAST of CF835577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835577 ID=CF835577; Name=CF835577; organism=Citrus sinensis; type=EST; length=803bpback to top |