CF835578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835578 vs. ExPASy Swiss-Prot
Match: H2BS3_PARAN (Histone H2B.3, sperm OS=Parechinus angulosus PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 4.252e-33 Identity = 67/90 (74.44%), Postives = 82/90 (91.11%), Query Frame = -1 Query: 233 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 502 E+Y IYI+KVLKQVHPD GISS+AM +MNSF+ND+FE++A EASRL N++ T++SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 59 ESYGIYIYKVLKQVHPDTGISSRAMSVMNSFVNDVFERIASEASRLTSANRRSTVSSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 148
BLAST of CF835578 vs. ExPASy Swiss-Prot
Match: H2B2_KLULA (Histone H2B.2 OS=Kluyveromyces lactis GN=HTB1 PE=3 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 5.553e-33 Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = -1 Query: 233 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 502 ETY YI+KVLKQ HPD GIS K+M I+NSF+NDIFE++A E+S+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++SS Sbjct: 40 ETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATESSKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSS 129
BLAST of CF835578 vs. ExPASy Swiss-Prot
Match: H2B1_KLULA (Histone H2B.1 OS=Kluyveromyces lactis GN=HTB1 PE=3 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 5.553e-33 Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = -1 Query: 233 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 502 ETY YI+KVLKQ HPD GIS K+M I+NSF+NDIFE++A E+S+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++SS Sbjct: 40 ETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATESSKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSS 129
BLAST of CF835578 vs. ExPASy Swiss-Prot
Match: H2BS2_PARAN (Histone H2B.2, sperm OS=Parechinus angulosus PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 7.252e-33 Identity = 67/90 (74.44%), Postives = 82/90 (91.11%), Query Frame = -1 Query: 233 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 502 E+Y IYI+KVLKQVHPD GISS+AM +MNSF+ND+FE++A EASRL N++ T++SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 54 ESYGIYIYKVLKQVHPDTGISSRAMSVMNSFVNDVFERIAGEASRLTSANRRSTVSSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 143
BLAST of CF835578 vs. ExPASy Swiss-Prot
Match: H2BS2_STRPU (Histone H2B.2, sperm OS=Strongylocentrotus purpuratus PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.616e-32 Identity = 68/90 (75.56%), Postives = 81/90 (90.00%), Query Frame = -1 Query: 233 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 502 E+Y IYI+KVLKQVHPD GISS+ M +MNSF+NDIF ++A EASRL R N++ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 54 ESYGIYIYKVLKQVHPDTGISSRGMSVMNSFVNDIFGRIAGEASRLTRANRRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 143
BLAST of CF835578 vs. ExPASy Swiss-Prot
Match: H2B_CRYNE (Histone H2B OS=Cryptococcus neoformans GN=HTB1 PE=3 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 2.110e-32 Identity = 65/91 (71.43%), Postives = 83/91 (91.21%), Query Frame = -1 Query: 233 IETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 505 +E+Y YI+KVLKQVHPD GIS+KAM I+NSF++DIFE++A EAS+LA YN + TI+SREIQT+VRL+LPGEL+KHA+SEGTKAVTK++SS Sbjct: 48 VESYSSYIYKVLKQVHPDTGISNKAMAILNSFVSDIFERIATEASKLASYNHRSTISSREIQTSVRLILPGELSKHAISEGTKAVTKYSSS 138
BLAST of CF835578 vs. ExPASy Swiss-Prot
Match: H2B2_PICGU (Histone H2B.2 OS=Pichia guilliermondii GN=HTB2 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.110e-32 Identity = 66/90 (73.33%), Postives = 79/90 (87.78%), Query Frame = -1 Query: 233 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 502 ETY YI+KVLKQ HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSE T+ +TK++S+ Sbjct: 38 ETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERVASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEATRTITKYSSA 127
BLAST of CF835578 vs. ExPASy Swiss-Prot
Match: H2B1_PICGU (Histone H2B.1 OS=Pichia guilliermondii GN=HTB1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.110e-32 Identity = 66/90 (73.33%), Postives = 79/90 (87.78%), Query Frame = -1 Query: 233 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 502 ETY YI+KVLKQ HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSE T+ +TK++S+ Sbjct: 38 ETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERVASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEATRTITKYSSA 127
BLAST of CF835578 vs. ExPASy Swiss-Prot
Match: H2BS2_PSAMI (Histone H2B.2, sperm OS=Psammechinus miliaris PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 2.756e-32 Identity = 67/92 (72.83%), Postives = 82/92 (89.13%), Query Frame = -1 Query: 227 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*R 502 E+Y IYI+KVLKQVHPD GISS+ M +MNSF+ND+FE++A EASRL N++ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T++ R Sbjct: 52 ESYGIYIYKVLKQVHPDTGISSRGMSVMNSFVNDVFERIAGEASRLTSANRRSTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTARR 143
BLAST of CF835578 vs. ExPASy Swiss-Prot
Match: H2BS2_LYTPI (Histone H2B.2, sperm OS=Lytechinus pictus PE=2 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.368e-31 Identity = 65/90 (72.22%), Postives = 81/90 (90.00%), Query Frame = -1 Query: 233 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 502 E+Y YI++VLKQVHPD GISS+ M +MNSF+ND+FE++A EASRL + N++ TI+SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S Sbjct: 53 ESYGSYIYRVLKQVHPDTGISSRGMSVMNSFVNDVFERIAGEASRLCQANRRRTISSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 142 The following BLAST results are available for this feature:
BLAST of CF835578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835578 ID=CF835578; Name=CF835578; organism=Citrus sinensis; type=EST; length=784bpback to top |