CF835593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835593 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 45/142 (31.69%), Postives = 71/142 (50.00%), Query Frame = -1 Query: 298 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 690 PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL +L +EL L+ NK D P+A++ E+ +LGL+ +R ++ S G G EG+ WLS + Sbjct: 50 PTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189
BLAST of CF835593 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = -1 Query: 325 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLG-LHSLRQRH-WYIQSTCATSGEGLYE 693 +PT GFN + KN + ++G +R W+ + L+F+VDS DR R+ AR EL ++L+ D D +++ ANKQDL AMN E+ +LG L S QR + + ++ A +G G E Sbjct: 106 VPTWGFNSVRLPTKNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDP--DLPVVIVANKQDLSGAMNMVELQQELGLLASYNQREVFLLAASIAPAGSGFGE 228
BLAST of CF835593 vs. ExPASy Swiss-Prot
Match: SAR1_LODEL (Small COPII coat GTPase SAR1 OS=Lodderomyces elongisporus GN=SAR1 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 34/106 (32.08%), Postives = 60/106 (56.60%), Query Frame = -1 Query: 388 IVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHS 705 + T PT+ E + ++ FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL + +EL ++ NK D+P A+ E+ + LGL++ Sbjct: 45 LATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADSERFAESKAELESLFKIEELSQVPFVILGNKIDVPTAVGEMELKNALGLYN 150
BLAST of CF835593 vs. ExPASy Swiss-Prot
Match: SAR1_ASPTN (Small COPII coat GTPase sar1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sar1 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 45/142 (31.69%), Postives = 71/142 (50.00%), Query Frame = -1 Query: 298 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH-----------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 690 PT E + N FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL +L +EL L+ NK D P+A++ E+ +LGL+ +R ++ S G G EG+ WLS + Sbjct: 50 PTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDYERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYG--EGIRWLSQYV 189
BLAST of CF835593 vs. ExPASy Swiss-Prot
Match: SAR1_PICGU (Small COPII coat GTPase SAR1 OS=Pichia guilliermondii GN=SAR1 PE=3 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13 Identity = 43/146 (29.45%), Postives = 69/146 (47.26%), Query Frame = -1 Query: 298 IVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR----------QRHWYIQSTCATSGEGLYEGLDWLSNNI 705 + T PT+ E + ++ FT +D+GG + R LW+ YF G++F+VD+ D +R+ E++ EL + +EL L+ NK D A+ E+ LGL++ QR + G EG WLS+ I Sbjct: 45 LATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERLAESKAELESLFRIEELSQVPFLILGNKIDKSTAIGEMELKSALGLYNTTGKDVTKLPEGQRPIEVFMVSVVMRMGYGEGFKWLSSFI 190
BLAST of CF835593 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = -1 Query: 298 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 690 PT+ E + N+ FT +D+GG + R LWR YF G++++VD D +R+ E++ EL +L +EL L+ NK D P A++ E+ LGL+ +R ++ S G G EG WL+ + Sbjct: 50 PTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQTTGKGVSKPVPGIRPIEVFMCSVVLRQGYG--EGFKWLAQYV 190
BLAST of CF835593 vs. ExPASy Swiss-Prot
Match: ARL17_HUMAN (ADP-ribosylation factor-like protein 17 OS=Homo sapiens GN=ARL17 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 32/47 (68.09%), Postives = 38/47 (80.85%), Query Frame = -1 Query: 568 EIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQG 708 E V +PT+GF VETVEYKN +F VWDVG KIRPLW+H+FQNT+G Sbjct: 41 ETVPAVPTVGFCVETVEYKNNTFAVWDVGSHFKIRPLWQHFFQNTKG 87
BLAST of CF835593 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 42/146 (28.77%), Postives = 68/146 (46.58%), Query Frame = -1 Query: 298 IVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR----------QRHWYIQSTCATSGEGLYEGLDWLSNNI 705 + T PT+ E + ++ FT +D+GG + R LW+ YF G++F+VD+ D +R E++ EL + +EL L+ NK D +A+ E+ LGL++ QR + G +G WLS I Sbjct: 45 LATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILGNKIDASSAVGEMELKSALGLYNTTGKDTGKLPEGQRPIEVFMVSVVMRMGYGDGFKWLSQYI 190
BLAST of CF835593 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 45/143 (31.47%), Postives = 67/143 (46.85%), Query Frame = -1 Query: 298 IVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR-------QRHWYIQSTCATSGEGLYEGLDWLSNNI 705 + T PT E + +I FT +D+GG + R LW+ YF G++F+VD+ D +R EAR EL + EL+ ++ NK D P+A++ E+ LGL + QR + G E WLS I Sbjct: 48 LATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLNTTGDARIEGQRPVELFMCSVVMKSGYLEAFQWLSQYI 190
BLAST of CF835593 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 45/146 (30.82%), Postives = 71/146 (48.63%), Query Frame = -1 Query: 298 IVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLR----------QRHWYIQSTCATSGEGLYEGLDWLSNNI 705 + T PT E + N+ FT +D+GG ++ R +W+ YF G++++VD D +R E+R EL +L +EL +LV NK D A++ E+ LGL + QR + + +G EG+ WLS I Sbjct: 45 LATLQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMTTTGKDKVQLVEGQRPLEVFTCSIYLRQGYGEGIRWLSQYI 190 The following BLAST results are available for this feature:
BLAST of CF835593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 209
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835593 ID=CF835593; Name=CF835593; organism=Citrus sinensis; type=EST; length=708bpback to top |