CF835595
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_NANEQ (50S ribosomal protein L5P OS=Nanoarchaeum equitans GN=rpl5p PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.088e-25 Identity = 64/162 (39.51%), Postives = 103/162 (63.58%), Query Frame = -2 Query: 189 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLL-ESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQ 668 + +PMR+I+++K+ LNI VGESG++L +A ++L++L+GQ PV +KA+ V + IR I VT+RG+KA ++L E L ++++ +F+D G FGFGI E+I + G+KYDP G+ G++ +V LE G +HR+ KE+ +KW Q Sbjct: 1 MEHPMRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVKVTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLEAYVTLERPGYRVERRRIKRSKVGSRHRLNKEEIIKWAQ 161
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_SULTO (50S ribosomal protein L5P OS=Sulfolobus tokodaii GN=rpl5p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25 Identity = 61/176 (34.66%), Postives = 103/176 (58.52%), Query Frame = -2 Query: 165 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHR-VTKEDAMKWFQVKYEGVIL 686 M +E + NPMR+++++K+ +NI VGE+G+RL +A ++L++L+G PV++ A+ T+R FG+R+ I VT+RG KA + L L + + +F + G FGI EH+ + G +YDP GI+GMD + L +HR V+KE+AM++ + + I+ Sbjct: 1 MMAETQTVNPMRKLRLEKVTVNIGVGEAGERLQKAYQLLQELTGVKPVYTIAKRTIREFGVRKGAPIGVKVTLRGKKAEEFLNKVLAAVGHRIKASSFDEYGNVSFGIAEHVLIPGTRYDPEIGIFGMDVAITLVRPGFRVARRRRKKAHIPKRHRTVSKEEAMEFLKQNFNVTIV 176
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_SULAC (50S ribosomal protein L5P OS=Sulfolobus acidocaldarius GN=rpl5p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24 Identity = 59/172 (34.30%), Postives = 96/172 (55.81%), Query Frame = -2 Query: 165 EKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVIL 677 E K N MR + + K+ +NI VGESG+RL +A +++++L+G PV++K R ++R FG+R+ I T+R A++ L+ L + L + +F + G FGI EH+ + G +YDP GI+GMD + L +HRVTKE+A+ + + + IL Sbjct: 5 EAKKENVMRRVVLDKVTVNIGVGESGERLQKAYQLVQELTGVKPVYTKGRKSIREFGVRKGAPIGVKATLRRQAAVEFLKKVLPAVNFRLKQSSFDNYGNVSFGIAEHVLIPGTRYDPEIGIFGMDVAITLVRPGYRTMKRKRKKASIPRRHRVTKEEAINFMKENFNVTIL 176
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_METB6 (50S ribosomal protein L5P OS=Methanoregula boonei (strain 6A8) GN=rpl5p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.309e-24 Identity = 57/160 (35.62%), Postives = 91/160 (56.88%), Query Frame = -2 Query: 180 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKY 656 MR++ + K+V+++ VGESG++L +A +++ ++ QTP+ S A+ T +F IR+ I C VT+RG A +++ L + + F +G F FGI+EH D G+ YDP GI+GMD VVLE + RV KEDA+ + + +Y Sbjct: 1 MRDVHIDKVVVHMGVGESGEKLVKAENIMKTITKQTPIRSVAKMTQPAFNIRKGAPIGCKVTLRGKPAEDFIKTSLNIVNKTIFESQFDKSGNFSFGIEEHTDFPGMSYDPQIGIFGMDINVVLERNGIRITRRRMQKKKLPEKQRVKKEDAIAFLKKEY 160
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_METST (50S ribosomal protein L5P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl5p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.015e-24 Identity = 62/166 (37.35%), Postives = 92/166 (55.42%), Query Frame = -2 Query: 168 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVI 662 N M++ + K +NI VGE G++LTRA K++E L Q PV + ++ T FGIR+ + IAC VT+RG+KA +++ L E + F G FGI+EHID+ G+KYDP GI+GMD V + RVTKE++M++ + + I Sbjct: 2 NVMQKPFIAKATINIGVGEGGEKLTRAEKLIETLVDQKPVRTYSKVTNPEFGIRKKQPIACKVTLRGEKADKIISMVLSGLENRIKASQFDKEGNVSFGIREHIDIPGVKYDPDIGIFGMDVSVTFQKPGHRIKERRLRPKKLPQAQRVTKEESMEYMKENFNVTI 167
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_METAC (50S ribosomal protein L5P OS=Methanosarcina acetivorans GN=rpl5p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.015e-24 Identity = 61/160 (38.12%), Postives = 89/160 (55.62%), Query Frame = -2 Query: 180 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKY 656 MR V+K+++++ VGESG L A +L ++GQ V A+ T+ +F I++NE I C VT+RG KA + LE+ L + E L R F G FGI+EH D G++YDP+ G++GMD VVL+ HRVT +DA+ + Y Sbjct: 1 MRTPIVEKVIVHMGVGESGQHLVNAEDILRNITGQEVVRCFAKRTLPAFSIKKNEPIGCKVTLRGQKAQEFLETALGIVEKTLNRSQFDSFGNVSFGIEEHTDFPGMRYDPNIGVFGMDVTVVLKRPGERICKRRIAARKIPAGHRVTVDDAIAFLNESY 160
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_PYRAE (50S ribosomal protein L5P OS=Pyrobaculum aerophilum GN=rpl5p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.938e-24 Identity = 62/159 (38.99%), Postives = 97/159 (61.01%), Query Frame = -2 Query: 189 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQ 662 +PM+ I ++K+V+NI VG SG++L +AA +L++L+G P +A+ +++ FGIR+ E I VT+R D+A+ L L+ + + +F D G FGI+EHI L G+KYDP+ GI+GMD V L G + VTKE+A+++FQ Sbjct: 13 HPMQRIYIEKVVVNIGVGASGEKLEKAAGLLKELTGAEPSRRRAKKSIKDFGIRKGEPIGVAVTLRRDQAVNFLMRALQAVNNRVKKTSFDDRGNVCFGIKEHILLPGVKYDPAVGIWGMDVCVKLAKPGLRVQLRRRRRSKVGKRQLVTKEEAIEFFQ 171
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_THEVO (50S ribosomal protein L5P OS=Thermoplasma volcanium GN=rpl5p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24 Identity = 59/127 (46.46%), Postives = 83/127 (65.35%), Query Frame = -2 Query: 285 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLE 662 N M+EI + K+V+NI VG++GDRLT+AAKVLE L+G P + A+ +VR F IR+ I VT+R D A+ L L VK+Y++ +F G FGI ++ D G+KYDP GI+GMD +VL+ Sbjct: 2 NQMQEIIIDKVVVNIGVGQAGDRLTKAAKVLEMLTGHKPTQTLAKKSVRDFNIRKRLPIGVKVTLRKDDAVNFLNKALYVKDYKIPDYSFDKHGNAYFGISDYTDFKGMKYDPDIGIFGMDVAIVLK 128
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_PICTO (50S ribosomal protein L5P OS=Picrophilus torridus GN=rpl5p PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.146e-23 Identity = 63/168 (37.50%), Postives = 92/168 (54.76%), Query Frame = -2 Query: 165 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQH-RVTKEDAMKWFQVKYEGVIL 662 N MREI + K+V+NI VG +G+RL RAAKVLE L+ P F+ A+ TVR F IR+ I VT+R D A+ L+ K+Y++ +F G FGI ++ D G+KYDP GI+GMD +V + R++KE+ +K+ Q + I+ Sbjct: 7 NSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKGLNIGVKVTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGIFGMDIAIVFRRRGGYRIEKRRIKKMHIPKKMRISKEETIKYLQENFNVKII 174
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_METMJ (50S ribosomal protein L5P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl5p PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.146e-23 Identity = 60/160 (37.50%), Postives = 91/160 (56.88%), Query Frame = -2 Query: 180 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKY 656 M++I + K+V+++ VGESG+RL +A +++Q++GQ PV + A+ T +FGIR+ I C VT+R + A + + + L + E L F TG FGI+EH D G+ YDP+ GIYGMD VVLE +V KE+A+ + Y Sbjct: 4 MKDIYIDKVVVHMGVGESGERLVKAEDLVKQITGQKPVRTIAKRTQPAFGIRKGAPIGCKVTLRRENAEKFITTALDIIERRLAPSQFDRTGNVSFGIEEHTDFPGMSYDPTIGIYGMDVNVVLEYKGARIARRSVERRKLPADQKVNKEEAIAFMCENY 163 The following BLAST results are available for this feature:
BLAST of CF835595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835595 ID=CF835595; Name=CF835595; organism=Citrus sinensis; type=EST; length=705bpback to top |