CF835595
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_AQUAE (50S ribosomal protein L5 OS=Aquifex aeolicus GN=rplE PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 45/133 (33.83%), Postives = 74/133 (55.64%), Query Frame = -2 Query: 294 NPMREIKVQKLVLNISVGESGD---RLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFV 662 +PM+ ++QK+V+N+ VGE+ +L RA + L ++GQ PV ++AR + F +R+ I C VT+R ++ L+ + +VK+++ L R+F G + FGI E I I YD I GMD + Sbjct: 32 SPMQIPRLQKIVVNMGVGEAVQDIRQLERAVEDLRAITGQQPVITRARKSEAGFKLRKGMPIGCKVTLRKERMWDFLDKLISVALPRVKDFKGLSPRSFDGRGNYAFGIAEQIVFPEIDYDKVDRIRGMDIII 164
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_SYNFM (50S ribosomal protein L5 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rplE PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 42/143 (29.37%), Postives = 79/143 (55.24%), Query Frame = -2 Query: 291 RMASEKKLSNPMREIKVQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVV 689 +++ + K +PM+ ++ K++LN+ +G++ L AA+ L +SGQ PV ++AR ++ +F +R+ I C VT+RGD+ + + + +V+++ + R G + GI+EHI I YD I GM+ +V Sbjct: 15 KLSEQFKYKSPMQIPRLSKIILNMGLGDAIQNIKILDSAAEELGMISGQKPVITRARQSIAAFKLRKGMPIGCMVTLRGDRMYEFFDKLVNVALPRVRDFRGVSSRALDGRGNYTLGIKEHIIFPEIDYDKIDKIKGMNITIV 157
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_RHILW (50S ribosomal protein L5 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=rplE PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 48/147 (32.65%), Postives = 80/147 (54.42%), Query Frame = -2 Query: 294 QQTRMASEKKLS--NPMREIKVQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYELLR-RNFSDTGCFGFGIQEHI-DLGIKYDPSTGIYGMDFFV 698 ++ R A +++ S N M K+ K+V+N+ VGE+ + T AA L ++GQ PV ++AR ++ F +R I VT+RG + + L+ + +V+++ L ++F G F GI+EHI L I YD ++GMD V Sbjct: 16 ERIRKAMQEQFSYANEMMIPKLDKIVINMGVGEATADSKKPTVAAADLAAIAGQKPVITRARNSIAGFKVREQMPIGAKVTLRGARMYEFLDRLVNIALPRVRDFRGLNPKSFDGRGNFAMGIKEHIVFLEINYDKVDQMWGMDIIV 162
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_HAHCH (50S ribosomal protein L5 OS=Hahella chejuensis (strain KCTC 2396) GN=rplE PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 46/141 (32.62%), Postives = 78/141 (55.32%), Query Frame = -2 Query: 294 MASEKKLSNPMREIKVQKLVLNISVGES-GDR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFV 686 + E S+ M+ +++K+ LN+ VGE+ GD+ + AA LE ++GQ V +KAR +V F IR+ I C VT+RGD+ + E + +V+++ L +++F G + G++E I I YD + GMD + Sbjct: 16 LMKEMSYSSVMQVPRIEKITLNMGVGEALGDKKQIEAAAADLEAITGQKVVVTKARKSVAGFKIRQGFPIGCKVTLRGDRMWEFFERLVDVAIPRVRDFRGLNQKSFDGRGNYSMGVKEQIIFPEIDYDKIDKVRGMDITI 156
BLAST of CF835595 vs. ExPASy Swiss-Prot
Match: RL5_CLONN (50S ribosomal protein L5 OS=Clostridium novyi (strain NT) GN=rplE PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 44/134 (32.84%), Postives = 75/134 (55.97%), Query Frame = -2 Query: 291 NPMREIKVQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVV 662 N M+ K++K+V+N+ VGE+ D L A L+Q++GQ PV ++A+ +V +F IR+N I C VT+R D + + + +V+++ + ++F G + GI+E I I+YD + GMD V Sbjct: 24 NIMQVPKLEKIVVNMGVGEAKDNSKVLESAIADLQQITGQKPVITRAKKSVANFKIRQNMPIGCKVTLRKDMMFEFADKLMNIALPRVRDFRGVSAKSFDGRGNYALGIKEQIIFPEIEYDKIDKVRGMDIIFV 157 The following BLAST results are available for this feature:
BLAST of CF835595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835595 ID=CF835595; Name=CF835595; organism=Citrus sinensis; type=EST; length=705bpback to top |