CF835612

Overview
NameCF835612
Unique NameCF835612
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835612 vs. ExPASy Swiss-Prot
Match: PEAMT_SPIOL (Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 3
Query:  396 QLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWC 734
            +L LK GQKVLDVGCGIGG    +A      V G++ +   I+    L R  G+     F  AD  K  +P+NSFD +Y+ +   H  D    ++  ++ LKPG      ++C
Sbjct:  280 KLDLKPGQKVLDVGCGIGGGDFYMAENYDVEVVGIDLSINMISFA--LERSIGLKCAVEFEVADCTKKDYPENSFDVIYSRDTILHIQDKPALFRSFHKWLKPGGKVLISDYC 390          
BLAST of CF835612 vs. ExPASy Swiss-Prot
Match: PEAM1_ARATH (Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 3
Query:  396 QLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWC 734
            ++ LK GQKVLDVGCGIGG    +A      V G++ +   I+    L R  G+  +  F  AD     +PDNSFD +Y+ +   H  D    ++  ++ LKPG      ++C
Sbjct:  277 KMNLKPGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMISFA--LERAIGLSCSVEFEVADCTTKHYPDNSFDVIYSRDTILHIQDKPALFRTFFKWLKPGGKVLISDYC 387          
BLAST of CF835612 vs. ExPASy Swiss-Prot
Match: PEAM2_ARATH (Putative phosphoethanolamine N-methyltransferase 2 OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 3
Query:  396 QLGLKSGQKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWC 734
            ++ LK GQKVLDVGCGIGG    +A      V G++ +   I+    L R  G+  +  F  AD     +PDNSFD +Y+ +   H  D    ++  ++ LKPG      ++C
Sbjct:  261 KMDLKPGQKVLDVGCGIGGGDFYMAENFDVHVVGIDLSVNMISFA--LERAIGLKCSVEFEVADCTTKTYPDNSFDVIYSRDTILHIQDKPALFRTFFKWLKPGGKVLITDYC 371          
The following BLAST results are available for this feature:
BLAST of CF835612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PEAMT_SPIOL3.276e-1135.40Phosphoethanolamine N-methyltransferase OS=Spinaci... [more]
PEAM1_ARATH5.588e-1134.51Phosphoethanolamine N-methyltransferase 1 OS=Arabi... [more]
PEAM2_ARATH7.299e-1134.51Putative phosphoethanolamine N-methyltransferase 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01J06_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835612 ID=CF835612; Name=CF835612; organism=Citrus sinensis; type=EST; length=752bp
ACGTTAGATTCCAAAGCTCCTTCAGTCTTCACACACAACAGACACACACC
TTCTCTCTGTTCCGAATTCTCCTTCTCTTTTTGCGGCTCTTTCAACATCG
GTATATTGCGAGAATGTCGAAGGCTGGAGCTTTTGATTTGGCTTCTGGAG
TGGGCGGAAAGATTGATAAAACCGAAGTGCTCTCCGCCGTCGAAAAGTAT
GAGAAGTATCATGTCTGTTATGGAGGTGAAGAGGAAGAGAGAAAAGCTAA
CTACACTGACATGGTTAATAAATATTATGATCTTGTTACCAGCTTTTATG
AGTTTGGCTGGGGGGAGTCATTCCATTTTGCACCAAGATGGAAAGGAGAG
TCTCTTCAGGAGAGTATCAAGCGACATGAGCACTTCCTTGCTTTGCAACT
TGGCCTTAAATCTGGGCAGAAGGTTTTGGATGTTGGATGTGGAATTGGTG
GACCCTTGAGAGAAATTGCTCGATTCAGCTCAACATCAGTTACTGGGTTG
AACAACAATGAGTATCAGATAACAAGAGGAAAGGAATTAAACCGCTTTGC
AGGAGTGGACAAGACCTGCAACTTTGTAAAGGCTGACTTCATGAAAATGC
CATTTCCTGACAATAGTTTTGATGCTGTGTATGCAATTGAAGCAACCTGT
CATGCTCCAGATGCATATGGATGCTACAAAGAGATTTACAGAGTATTAAA
GCCTGGCCAATGTTTTGCTGCATATGAATGGTGCTTGACTGATGCGTTTG
AT
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