CF835628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSFA9_ORYSJ (Heat stress transcription factor A-9 OS=Oryza sativa subsp. japonica GN=HSFA9 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.278e-37 Identity = 86/215 (40.00%), Postives = 134/215 (62.33%), Query Frame = 2 Query: 119 IAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMM---MRGGAGDQDLD----------------DEEIVM-EIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFLYKVVEDPDLLPRIIMEKESTTNRNNYYL--GDKKRR 697 +APF+ K Y MV+DP TD++ISW + SF++ D F +R L +FK +NF+SF+RQLNTYGFRKV PD+WE+ANE F+ GQKHLLK I RRK SS S + ++ G ++++ D+ ++M ++ LR Q++ + E+Q + +RL+ E+ +QMMA L VV++P L +++ +++ R+N++ G KKRR Sbjct: 48 VAPFLTKVYDMVSDPATDNVISWAEGGGSFVIWDSHAF-ERDLHRHFKHSNFTSFIRQLNTYGFRKVHPDRWEWANEGFIMGQKHLLKTIKRRKKSSQESPSEIQKAPVKTAPGTENIEIGKYGGLEKEVETLKRDKALLMQQLVDLRHYQQTSNLEVQNLIERLQVMEQNQQQMMALLAIVVQNPSFLNQLVQQQQQ-QRRSNWWSPDGSKKRR 260
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFA4D_ORYSJ (Heat stress transcription factor A-4d OS=Oryza sativa subsp. japonica GN=HSFA4D PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.278e-37 Identity = 78/173 (45.09%), Postives = 114/173 (65.90%), Query Frame = 2 Query: 125 PFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMRGGAGDQDLDDEE-----------IVMEIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFLYKVVE 610 PF++KTY+MV D T+ ++SWG SF+V +PLDFS+ +LP YFK NNFSSF+RQLNTYGFRK+DP++WEFANE F+RG HLLKNI RRK + S + + A + + EE +V ++ R Q+Q ++ ++Q M RL A E+R + ++A L ++++ Sbjct: 20 PFLIKTYEMVEDAATNHVVSWGPGGASFVVWNPLDFSRDLLPKYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFIRGHTHLLKNIHRRKPVHSHSLQNQINGPLAESERRELEEEINRLKYEKSILVADLQRQNQQQYVINWQMQAMEGRLVAMEQRQKNIVASLCEMLQ 192
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFA6B_ORYSJ (Heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6B PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.478e-35 Identity = 84/207 (40.58%), Postives = 120/207 (57.97%), Query Frame = 2 Query: 122 APFVMKTYQMVNDPTTDSLISWGKANN--SFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMRGGA--GDQDLDDEEIVM---------EIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFLYKVVEDPDLLPRIIMEKESTTNRNNYYLGDKKRRLM 703 APFV KTY+MV D TD+++SWG + SF+V DP + +LP +FK NFSSFVRQLNTYGFRKV PD+WEFANE FL GQKHLLKNI RR+ S + + G + E + + E+ L+Q+ + +L M + + ERR +Q + F KV+ +P + ++++ + N+N K++RLM Sbjct: 92 APFVAKTYEMVADAATDAVVSWGPGGSGASFVVWDPHALAAGVLPRFFKHANFSSFVRQLNTYGFRKVTPDRWEFANEAFLAGQKHLLKNIKRRRVSKPLVDSQLRNKASVVFGQPEAPGEVVSLKRDRAALRAEVIMLKQQYNACKSQLIAMEEMVRNIERRQQQTIGFFAKVLTNPAFVQQVLL---NYVNKNGLRGAAKRQRLM 295
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.322e-34 Identity = 77/201 (38.31%), Postives = 121/201 (60.20%), Query Frame = 2 Query: 122 APFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRK--HS------SNRSAHHMMMRGGAGDQDLDDEEIVMEIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFLYKVVEDPDLLPRIIMEKESTTNRNNYYLGDKKRRL 700 APF++KTY+MV+D +TD ++SW NNSFIV + +FS+ +LP YFK NNFSSF+RQLNTYGFRK+DP++WEF N+ F++ QKHLLKNI RRK HS S+ +++ + I ++ + +Q++ + + M + ++ E R ++++ FL + +P + + E + +KKRRL Sbjct: 22 APFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSHSHPPASSTDQERAVLQEQMDKLSREKAAIEAKLLKFKQQKVVAKHQFEEMTEHVDDMENRQKKLLNFLETAIRNPTFVKNFGKKVEQL----DISAYNKKRRL 218
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFA4C_ARATH (Heat stress transcription factor A-4c OS=Arabidopsis thaliana GN=HSFA4C PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.944e-34 Identity = 71/188 (37.77%), Postives = 119/188 (63.30%), Query Frame = 2 Query: 95 EPNNTNNVIAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMRGGAGDQDL------------DDEEIVMEIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFLYKVVEDPDL 622 E N ++ + PF+ KTY+MV+D ++DS+++W + N SFIV +P +FS+ +LP +FK NFSSF+RQLNTYGFRKVDP+KWEF N+ F+RG+ +L+KNI RRK + S ++ + + + + E ++ E+ QE+K + ++ + RL+ E+ + ++A++ +V+ P L Sbjct: 3 ENNGGSSSLPPFLTKTYEMVDDSSSDSVVAWSENNKSFIVKNPAEFSRDLLPRFFKHKNFSSFIRQLNTYGFRKVDPEKWEFLNDDFVRGRPYLMKNIHRRKPVHSHSLVNLQAQNPLTESERRSMEDQIERLKNEKEGLLAELQNQEQERKEFELQVTTLKDRLQHMEQHQKSIVAYVSQVLGKPGL 190
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSFA9_ARATH (Heat stress transcription factor A-9 OS=Arabidopsis thaliana GN=HSFA9 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.846e-34 Identity = 67/186 (36.02%), Postives = 113/186 (60.75%), Query Frame = 2 Query: 116 VIAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSS---NRSAHHMMMRGGAGDQDLDDEEIVMEIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFLYKVVEDPDLLPRIIMEKESTTNR 664 +I PF+ KT+++V+D TD ++SW SFI+ D +FS+ +LP YFK NFSSF+RQLN+YGF+KVD D+WEFANE F G+KHLLKNI RR ++ N+ A + + +E+ +L+Q+Q+ ++ + +++ + + M++F K+ +D + R++ +++ R Sbjct: 68 LITPFLRKTFEIVDDKVTDPVVSWSPTRKSFIIWDSYEFSENLLPKYFKHKNFSSFIRQLNSYGFKKVDSDRWEFANEGFQGGKKHLLKNIKRRSKNTKCCNKEASTTTTETEVESLKEEQSPMRLEMLKLKQQQEESQHQMVTVQEKIHGVDTEQQHMLSFFAKLAKDQRFVERLVKKRKMKIQR 253
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSFB4_ARATH (Heat stress transcription factor B-4 OS=Arabidopsis thaliana GN=HSFB4 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.786e-31 Identity = 66/112 (58.93%), Postives = 82/112 (73.21%), Query Frame = 2 Query: 116 VIAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRK--------HSSNRSAHH 427 V APF+ KTYQ+V+DP TD ++SWG + +F+V P +F++ +LP YFK NNFSSFVRQLNTYGFRK+ PD+WEFANE+F RG+KHLL I RRK HS S HH Sbjct: 31 VPAPFLTKTYQLVDDPATDHVVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRKTSQMIPQQHSPFMSHHH 142
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.786e-31 Identity = 78/197 (39.59%), Postives = 114/197 (57.87%), Query Frame = 2 Query: 122 APFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMRGGA-------GDQ---------------DLDDEEIVMEIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFLYKVVE-DPDLLPRIIME 643 APF++KTYQ+V+D TD +ISW + +F+V +F++ +LP YFK NNFSSFVRQLNTYGFRK+ PDKWEFANE F RGQK LL I RRK ++ A + GA GD +D + + L E + L ++ Q ++ L +++ +++AFL + V+ PD++ RI+ + Sbjct: 8 APFLLKTYQLVDDAATDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRKTVTSTPAGGKSVAAGASASPDNSGDDIGSSSTSSPDSKNPGSVDTPGKLSQFTDLSDENEKLKKDNQMLSSELVQAKKQCNELVAFLSQYVKVAPDMINRIMSQ 204
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFB4D_ORYSJ (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica GN=HSFB4D PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.579e-30 Identity = 60/96 (62.50%), Postives = 77/96 (80.21%), Query Frame = 2 Query: 122 APFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSS 409 APF+ KTYQ+V+DP+TD ++SWG+ +F+V P +F++ +LP YFK NNFSSFVRQLNTYGFRK+ D+WEFANE+F +G KHLL I RRK SS Sbjct: 35 APFLSKTYQLVDDPSTDDVVSWGEDEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLSEIHRRKSSS 130
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFB4B_ORYSJ (Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica GN=HSFB4B PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.746e-30 Identity = 60/97 (61.86%), Postives = 77/97 (79.38%), Query Frame = 2 Query: 116 VIAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHS 406 V APF+ KTYQ+V+DP TD ++SWG+ + +F+V P +F++ +LP YFK NNFSSFVRQLNTYGFRK+ D+WEFANE+F +G KHLL I RRK S Sbjct: 31 VPAPFLTKTYQLVDDPCTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSS 127 The following BLAST results are available for this feature:
BLAST of CF835628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835628 ID=CF835628; Name=CF835628; organism=Citrus sinensis; type=EST; length=785bpback to top |