CF835628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFB4C_ORYSJ (Heat stress transcription factor B-4c OS=Oryza sativa subsp. japonica GN=HSFB4C PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.852e-29 Identity = 63/103 (61.17%), Postives = 80/103 (77.67%), Query Frame = 2 Query: 116 VIAPFVMKTYQMVNDPTTDSLISWGKAN-NSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSA 421 V APF+ KTYQ+V+DP TD ++SWG ++F+V P +F++ ILP YFK NNFSSFVRQLNTYGFRKV P++WEFANE+F +G+K LL I RRK SS +A Sbjct: 21 VPAPFLTKTYQLVDDPATDHIVSWGDDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYGFRKVVPERWEFANEFFRKGEKQLLTEIHRRKTSSASTA 123
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSFB1_ARATH (Heat stress transcription factor B-1 OS=Arabidopsis thaliana GN=HSFB1 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 6.353e-29 Identity = 69/179 (38.55%), Postives = 104/179 (58.10%), Query Frame = 2 Query: 113 NVIAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMRG-------GAGD-----------QDLDDEEIVMEIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFL 595 +V APF+ KTYQ+V+D +TD ++SW + +F+V +F++ +LP YFK NNFSSF+RQLNTYGFRK PDKWEFAN++F RG + LL +I RRK +A ++ G G GD + + +A L E + L E ++ L A +++ ++++ FL Sbjct: 10 SVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRKSVIASTAGKCVVVGSPSESNSGGGDDHGSSSTSSPGSSKNPGSVENMVADLSGENEKLKRENNNLSSELAAAKKQRDELVTFL 188
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFB2B_ARATH (Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.084e-28 Identity = 59/102 (57.84%), Postives = 77/102 (75.49%), Query Frame = 2 Query: 101 NNTNNVIAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHS 406 ++ ++ PF+ KTYQ+V DP D LISW + +FIV P +F++ +LP YFK NNFSSFVRQLNTYGFRKV PD+WEF+N+ F RG+K LL++I RRK S Sbjct: 51 DSQRSIPTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRKIS 152
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica GN=HSFB2C PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.118e-28 Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 2 Query: 125 PFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRK 400 PF+ KTYQ+V DP D +ISW + ++F+V P +F++ +LP YFK NNFSSFVRQLNTYGFRK+ PD+WEFAN+ F RG+K LL +I RRK Sbjct: 38 PFLTKTYQLVEDPAVDDVISWNEDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGEKRLLCDIHRRK 129
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFB2A_ARATH (Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.024e-28 Identity = 55/102 (53.92%), Postives = 78/102 (76.47%), Query Frame = 2 Query: 95 EPNNTNNVIAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRK 400 E ++ ++ PF+ KT+ +V D + D +ISW + +SFIV +P DF++ +LP +FK NNFSSFVRQLNTYGF+KV PD+WEF+N++F RG+K LL+ I RRK Sbjct: 13 ESSSQRSIPTPFLTKTFNLVEDSSIDDVISWNEDGSSFIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRRK 114
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFB4A_ORYSJ (Putative heat stress transcription factor B-4a OS=Oryza sativa subsp. japonica GN=HSFB4A PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.174e-28 Identity = 60/103 (58.25%), Postives = 80/103 (77.67%), Query Frame = 2 Query: 116 VIAPFVMKTYQMVNDPTTDSLISW-----GKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSS 409 V APF+ KTYQ+V+DP TD ++SW G++ +SF+V P +F++ ILP YFK +NFSSFVRQLNTYGFRKV P++WEFANE+F +G+K LL I RRK ++ Sbjct: 22 VPAPFLTKTYQLVDDPATDHVVSWEDDDGGESASSFVVWRPPEFARDILPNYFKHSNFSSFVRQLNTYGFRKVVPERWEFANEFFRKGEKQLLCEIHRRKSAA 124
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSFB1_ORYSJ (Heat stress transcription factor B-1 OS=Oryza sativa subsp. japonica GN=HSFB1 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.198e-27 Identity = 71/195 (36.41%), Postives = 106/195 (54.36%), Query Frame = 2 Query: 122 APFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAH-------------------HMMMRGGAGDQDLDDEEIVMEIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFLYKVVEDPDLLPRIIMEKE 649 APF+ KT QMV + TD +ISWGK SF+V P++F++ +LP +FK NFSSFVRQLNTYGFRKV PD+WEFAN F RG++ LL I RRK ++ +S+ +G+ A + E + L ++ Q + L R E+++ FL + ++ L R++M+++ Sbjct: 29 APFLTKTNQMVEESATDEVISWGKEGRSFVVWKPVEFARDLLPLHFKHCNFSSFVRQLNTYGFRKVVPDRWEFANGNFRRGEQGLLSGIRRRKATTPQSSKSCGSGVNVAFPPPLPPLPPEPSATTSSGNDRSSSSASSPPRADITSENEQLRKDNQTLTMELARARRHCEELLGFLSRFLDVRQLDLRLLMQED 223
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFB2B_ORYSJ (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica GN=HSFB2B PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.198e-27 Identity = 56/95 (58.95%), Postives = 72/95 (75.79%), Query Frame = 2 Query: 116 VIAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRK 400 V PF+ KTYQ+V+DP D +ISW ++F+V P +F++ +LP YFK NNFSSFVRQLNTYGFRK+ PD+WEFAN+ F RG++ LL I RRK Sbjct: 45 VPTPFLTKTYQLVDDPAVDDVISWNDDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGERRLLCEIHRRK 139
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HFB2A_ORYSJ (Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica GN=HSFB2A PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.044e-27 Identity = 57/99 (57.58%), Postives = 72/99 (72.73%), Query Frame = 2 Query: 125 PFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSA 421 PF+ KTY MV DP+TD ISW + +F+V P +F++ +LP +FK +NFSSFVRQLNTYGF+KV D+WEFAN+ F RG+KHLL I RRK S A Sbjct: 10 PFLTKTYAMVEDPSTDETISWNDSGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVADRWEFANDCFRRGEKHLLGGIQRRKGSGTGGA 108
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSFB3_ARATH (Heat stress transcription factor B-3 OS=Arabidopsis thaliana GN=HSFB3 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.947e-27 Identity = 56/106 (52.83%), Postives = 77/106 (72.64%), Query Frame = 2 Query: 125 PFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDKWEFANEWFLRGQKHLLKNIVRRK--HSSNRSAHHMMM 436 PF++KTY++V DPTTD +ISW + F+V P +F++ +LP FK NFSSFVRQLNTYGFRKV +WEF+NE F +GQ+ L+ NI RRK H S+ ++H ++ Sbjct: 40 PFLVKTYKVVEDPTTDGVISWNEYGTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLNTYGFRKVTTIRWEFSNEMFRKGQRELMSNIRRRKSQHWSHNKSNHQVV 145 The following BLAST results are available for this feature:
BLAST of CF835628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835628 ID=CF835628; Name=CF835628; organism=Citrus sinensis; type=EST; length=785bpback to top |