CF835628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSF2_HUMAN (Heat shock factor protein 2 OS=Homo sapiens GN=HSF2 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.917e-17 Identity = 55/186 (29.57%), Postives = 94/186 (50.54%), Query Frame = 2 Query: 119 IAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKV-----------DPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMR------GGAGDQDLDDEEIVMEIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFLYKVVEDPDLL 625 + F+ K + +V + T+ I+W + SF+V+D F++ ILP YFK NN +SFVRQLN YGFRKV EF + +F +GQ LL+NI R+ SS + + A + E I ++ L+ E +SL +E+ + + ++ +++ F+ +V++ L+ Sbjct: 7 VPAFLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKVSSSKPEENKIRQEDLTKIISSAQKVQIKQETIESRLSELKSENESLWKEVSELRAKHAQQQQVIRKIVQFIVTLVQNNQLV 192
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSF4_MOUSE (Heat shock factor protein 4 OS=Mus musculus GN=Hsf4 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.243e-16 Identity = 57/158 (36.08%), Postives = 85/158 (53.80%), Query Frame = 2 Query: 119 IAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKV-----------DPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMRGGAGDQDLDD-EEIVMEIARLRQEQKSLDEELQGMNKRLE 556 + F+ K + +V DP TD LI W + SF+V D F++ +LP YFK +N +SFVRQLN YGFRKV + D EF + F+RG++ LL+ VRRK + +RG +D ++ E+ LR Q+S + LQ + ++ E Sbjct: 17 VPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLER-VRRKVPA--------LRGDDSRWRPEDLSRLLGEVQALRGVQESTEARLQELRQQNE 165
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSF4_HUMAN (Heat shock factor protein 4 OS=Homo sapiens GN=HSF4 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.243e-16 Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = 2 Query: 119 IAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKV-----------DPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMRGGAGDQDLDD-EEIVMEIARLRQEQKSLDEELQGMNKRLE 556 + F+ K + +V DP TD LI W + SF+V D F++ +LP YFK +N +SFVRQLN YGFRKV + D EF + F+RG++ LL+ VRRK + +RG G +D ++ E+ LR Q+S + L+ + ++ E Sbjct: 18 VPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLER-VRRKVPA--------LRGDDGRWRPEDLGRLLGEVQALRGVQESTEARLRELRQQNE 166
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSF2_CHICK (Heat shock factor protein 2 OS=Gallus gallus GN=HSF2 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.243e-16 Identity = 55/187 (29.41%), Postives = 101/187 (54.01%), Query Frame = 2 Query: 119 IAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKV-----------DPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMR-------GGAGDQDLDDEEIVMEIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFLYKVVEDPDLL 625 + F+ K + +V + ++ LI+W + SF+V+D F++ ILP YFK NN +SFVRQLN YGFRKV EF + +F +G++ LL++I +RK SS+R + + + A ++ E I ++ L++E +SL E+ + + ++ +++ F+ +V++ L+ Sbjct: 21 VPAFLSKLWALVGEAPSNQLITWSQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHVDSGIVKLERDGLVEFQHPYFKQGREDLLEHI-KRKVSSSRPEENKISQEDLSKIISSAQKVEIKQETIESRLSALKRENESLWREVAELRAKHLKQQQVIRKIVQFIVTLVQNNQLV 206
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSF4_CANFA (Heat shock factor protein 4 OS=Canis familiaris GN=HSF4 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.723e-16 Identity = 57/157 (36.31%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 119 IAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKV-----------DPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMRGGAGDQDLDDEEIVMEIARLRQEQKSLDEELQGMNKRLE 556 + F+ K + +V DP TD LI W + SF+V D F++ +LP YFK +N +SFVRQLN YGFRKV + D EF + F+RG++ LL+ VRRK + RS G +DL ++ E+ LR Q+ + L+ + ++ E Sbjct: 17 VPAFLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLPQYFKHSNMASFVRQLNMYGFRKVVSIEQGGLLRPERDHVEFQHPSFVRGREQLLER-VRRKVPALRSDD-----GRWRPEDLG--RLLGEVQALRGVQEITEARLRELRQQNE 165
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: PRR1_SCHPO (Transcription factor prr1 OS=Schizosaccharomyces pombe GN=prr1 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.998e-15 Identity = 62/201 (30.85%), Postives = 98/201 (48.76%), Query Frame = 2 Query: 107 TNNVIAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKVDPDK----------WEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMRGGAGDQDLDDEEIVMEIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAF-LYKVVEDPDLLPRIIM----EKESTTNR 664 ++N + FV K + M+ +P ++ W + +SFIV+D +F++ ILP +FK +NF+SFVRQLN Y F KV ++ WEF ++ F K LL NI R+ S A+ + E + ++ + QK LD L G+ AT + + F L + +E DLL I+ + E +T R Sbjct: 3 SSNGSSDFVRKLFNMLEEPEYRHILRWSDSGDSFIVLDTNEFTKTILPRHFKHSNFASFVRQLNKYDFHKVRHEEGAPSIYGEGAWEFRHDDFQLHHKDLLDNIKRKAPSKRNLANE--------NTAPVIENLKQQVDSILDFQKLLDRNLSGL-----ATSYQTILLKMFELKRGIESRDLLMSSIISYLCDLEGSTQR 190
BLAST of CF835628 vs. ExPASy Swiss-Prot
Match: HSF_DROME (Heat shock factor protein OS=Drosophila melanogaster GN=Hsf PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.998e-15 Identity = 47/182 (25.82%), Postives = 93/182 (51.10%), Query Frame = 2 Query: 119 IAPFVMKTYQMVNDPTTDSLISWGKANNSFIVVDPLDFSQRILPAYFKDNNFSSFVRQLNTYGFRKV----------DPDKWEFANEWFLRGQKHLLKNIVRRKHSSNRSAHHMMMRGGAGDQDLDDEEIV--------MEIARLRQEQKSLDEELQGMNKRLEATERRPEQMMAFLYKVVE 610 + F+ K +++V+D T+ LI W K SF++ + F++ +LP +K NN +SF+RQLN YGF K+ D D+ EF++ +F R LL I R+ ++ +++ A + L D +++ + ++QE + L E+ + ++ ++ +++ FL +V+ Sbjct: 46 VPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFDRDEIEFSHPFFKRNSPFLLDQIKRKISNNKNGDDKGVLKPEAMSKILTDVKVMRGRQDNLDSRFSAMKQENEVLWREIASLRQKHAKQQQIVNKLIQFLITIVQ 227 The following BLAST results are available for this feature:
BLAST of CF835628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835628 ID=CF835628; Name=CF835628; organism=Citrus sinensis; type=EST; length=785bpback to top |