CF835629

Overview
NameCF835629
Unique NameCF835629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1G_RABIT (Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 7.334e-38
Identity = 88/212 (41.51%), Postives = 125/212 (58.96%), Query Frame = 2
Query:   56 LHVGQENKNGFKGLIAAEYAGVEVKLAE---NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFLGDFKQAESV 679
            L+   EN   FK LIAA+Y+G +V++     +F  G TN++PEFL+  P GKVP  E  DG  VFESNAIA YV+    + +L GS+    A V QW+ F+  +I    S W++P LG M +   A E A   +KR L  L+ HL + T+LVG  VTLADI ++C L + +K ++  +F   FP+  R+F T  NQP+ +  LG+ K  E +
Sbjct:    6 LYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKM 213          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1G_PIG (Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 9.578e-38
Identity = 88/212 (41.51%), Postives = 124/212 (58.49%), Query Frame = 2
Query:   56 LHVGQENKNGFKGLIAAEYAGVEVKLAE---NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFLGDFKQAESV 679
            L+   EN   FK LIAA+Y+G +V++     +F  G TN +PEFL+  P GKVP  E  DG  VFESNAIA YV+    + +L GS+    A V QW+ F+  +I    S W++P LG M Y   A E A   ++R L  L+ HL + T+LVG  VTLADI ++C L + +K ++  +F   FP+  R+F T  NQP+ +  LG+ K  E +
Sbjct:    1 LYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNHTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHYNKQATENAKDEVRRVLGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKM 208          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1G_MACFA (Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.634e-37
Identity = 87/212 (41.04%), Postives = 125/212 (58.96%), Query Frame = 2
Query:   56 LHVGQENKNGFKGLIAAEYAGVEVKLAE---NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFLGDFKQAESV 679
            L+   EN   FK LIAA+Y+G +V++     +F  G TN++PEFL+  P GKVP  E  DG  VFESNAIA YV+    + +L GS+    A V QW+ F+  +I    S W++P LG M +   A E A   ++R L  L+ HL + T+LVG  VTLADI ++C L + +K ++  +F   FP+  R+F T  NQP+ +  LG+ K  E +
Sbjct:    6 LYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKM 213          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1G_HORSE (Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.634e-37
Identity = 87/212 (41.04%), Postives = 125/212 (58.96%), Query Frame = 2
Query:   56 LHVGQENKNGFKGLIAAEYAGVEVKLAE---NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFLGDFKQAESV 679
            L+   EN   FK LIAA+Y+G +V++     +F  G TN++PEFL+  P GKVP  E  DG  VFESNAIA YV+    + +L GS+    A V QW+ F+  +I    S W++P LG M +   A E A   ++R L  L+ HL + T+LVG  VTLADI ++C L + +K ++  +F   FP+  R+F T  NQP+ +  LG+ K  E +
Sbjct:    6 LYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKM 213          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1G_BOVIN (Elongation factor 1-gamma OS=Bos taurus GN=EEF1G PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.634e-37
Identity = 87/212 (41.04%), Postives = 125/212 (58.96%), Query Frame = 2
Query:   56 LHVGQENKNGFKGLIAAEYAGVEVKLAE---NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFLGDFKQAESV 679
            L+   EN   FK LIAA+Y+G +V++     +F  G TN++PEFL+  P GKVP  E  DG  VFESNAIA YV+    + +L GS+    A V QW+ F+  +I    S W++P LG M +   A E A   ++R L  L+ HL + T+LVG  VTLADI ++C L + +K ++  +F   FP+  R+F T  NQP+ +  LG+ K  E +
Sbjct:    6 LYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKM 213          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1G_HUMAN (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 8.108e-37
Identity = 86/212 (40.57%), Postives = 125/212 (58.96%), Query Frame = 2
Query:   56 LHVGQENKNGFKGLIAAEYAGVEVKLAE---NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFLGDFKQAESV 679
            L+   EN   FK LIAA+Y+G +V++     +F  G TN++PEFL+  P GKVP  E  DG  VFESNAIA YV+    + +L GS+    A V QW+ F+  +I    S W++P LG M +   A E A   ++R L  L+ +L + T+LVG  VTLADI ++C L + +K ++  +F   FP+  R+F T  NQP+ +  LG+ K  E +
Sbjct:    6 LYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSFRQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKM 213          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1G_CARAU (Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.806e-36
Identity = 88/212 (41.51%), Postives = 124/212 (58.49%), Query Frame = 2
Query:   56 LHVGQENKNGFKGLIAAEYAGVEVKLAEN---FEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFLGDFKQAESV 679
            L+   EN   FK  IAA+Y+G  +K+A     F  G TN+SP FL   PLGKVP  +  DG  +FESNAIA +++    ++ L GS+    A V QW+ F+  EI    S W++P LG MQ+   A E A   +KR L  LN HL + T+LVG  V+LADI ++C+L + +K ++   F   +P+V R+F T  NQP+ K  LG+ K  E +
Sbjct:    6 LYTYPENWRAFKAQIAAQYSGARLKIASASPAFTFGQTNRSPAFLSNFPLGKVPAYQGDDGFCLFESNAIAHFLS----NDALRGSTPQASAQVLQWVSFADSEIIPPASAWVFPTLGIMQFNKQATEQAKEEVKRVLAVLNQHLNTRTFLVGERVSLADITVVCSLLWLYKQVLEPAFRQPYPNVTRWFLTCVNQPQFKAVLGEVKLCEKM 213          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1G_DANRE (Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.081e-36
Identity = 87/212 (41.04%), Postives = 124/212 (58.49%), Query Frame = 2
Query:   56 LHVGQENKNGFKGLIAAEYAGVEVKLAEN---FEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFLGDFKQAESV 679
            L+   EN   FK  IAA+Y+G  +K+A     F  G TN+SP FL   PLGKVP  +  DG  +FESNAIA Y++    ++ L GS+    A V QW+ F+  E+    S W++P LG MQ+   A E A   +KR L  LN HL + T+LVG  ++LADI ++C+L + +K ++   F   +P+V R+F T  NQP+ K  LG+ K  E +
Sbjct:    6 LYTYPENWRAFKAQIAAQYSGARLKIASAPPAFTFGQTNRSPAFLGNFPLGKVPAYQGDDGFCLFESNAIAHYLS----NDVLRGSTPQASAQVLQWVSFADSEVIPPASAWVFPTLGIMQFNKQATEQAKEEVKRVLAVLNQHLNTRTFLVGERISLADITVVCSLLWLYKQVLEPAFRQPYPNVTRWFVTCVNQPQFKTVLGEVKLCEKM 213          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1GB_XENLA (Elongation factor 1-gamma-B OS=Xenopus laevis GN=eef1g-B PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.811e-35
Identity = 84/213 (39.44%), Postives = 128/213 (60.09%), Query Frame = 2
Query:   56 LHVGQENKNGFKGLIAAEYAGVEVKLAEN---FEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSS-LIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFLGDFKQAESV 679
            L+   +N   +K LIAA+Y+   +K+A +   F+ G+TNK+PEFLK  PLGKVP  E  +G  +FES+AIA YVA    +++L GS+  +  A V QW+ FS   +    S W++P LG MQ+   A E A   +K  L  L+ HL + T+LVG  +TLADI + C+L + +K ++  +F   + +V R+F T  NQP+ +  LG+ K  + +
Sbjct:    6 LYTYPDNWRAYKPLIAAQYSRFPIKVASSPPEFQFGLTNKTPEFLKKFPLGKVPAFEGNNGFCLFESSAIAHYVA----NDELRGSNNRLHQAQVIQWVGFSDSHVVPPASAWVFPTLGIMQFNKQATEQAKEEIKTVLGVLDCHLQTRTFLVGERITLADITLTCSLLWLYKQVLEPSFRQPYGNVTRWFVTCVNQPEFRAVLGEVKLCDKM 214          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1G_DROME (Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 5.628e-30
Identity = 83/210 (39.52%), Postives = 123/210 (58.57%), Query Frame = 2
Query:   56 LHVGQENKNGFKGLIAAEYAGVEVKLAENFEMGVTNKSPEFLKMNPLGKVPVLETPDGP-VFESNAIARYVARLKADNQLCGSSL-IDYAHVEQWMDFSAMEIDANISRWLYPRLGYM--QYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFLGDFKQAE 673
            L+   EN   +K LIAA+Y+G +VK+A+NF+ G TNKS EFLK  P GKVP  ET +G  + ESNAI    A L A+ QL G       A V+QW+ F+  EI      W++P LG +  Q    A++ A A L++    LN  L   T+L G  +TLADIV+  +L + +++++  +  S F +V R+F T+ NQ +++  + D+K  E
Sbjct:    6 LYTYPENFRAYKALIAAQYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQYLSESNAI----AYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLLGILPQQKNSTAKQEAEAVLQQ----LNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFGNVNRWFVTILNQKQVQAVVKDYKLCE 207          
The following BLAST results are available for this feature:
BLAST of CF835629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
EF1G_RABIT7.334e-3841.51Elongation factor 1-gamma OS=Oryctolagus cuniculus... [more]
EF1G_PIG9.578e-3841.51Elongation factor 1-gamma (Fragment) OS=Sus scrofa... [more]
EF1G_MACFA1.634e-3741.04Elongation factor 1-gamma OS=Macaca fascicularis G... [more]
EF1G_HORSE1.634e-3741.04Elongation factor 1-gamma OS=Equus caballus GN=EEF... [more]
EF1G_BOVIN1.634e-3741.04Elongation factor 1-gamma OS=Bos taurus GN=EEF1G P... [more]
EF1G_HUMAN8.108e-3740.57Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G... [more]
EF1G_CARAU1.806e-3641.51Elongation factor 1-gamma OS=Carassius auratus GN=... [more]
EF1G_DANRE3.081e-3641.04Elongation factor 1-gamma OS=Danio rerio GN=eef1g ... [more]
EF1GB_XENLA5.811e-3539.44Elongation factor 1-gamma-B OS=Xenopus laevis GN=e... [more]
EF1G_DROME5.628e-3039.52Elongation factor 1-gamma OS=Drosophila melanogast... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01J18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01J18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835629 ID=CF835629; Name=CF835629; organism=Citrus sinensis; type=EST; length=775bp
CGCATTCATCTGCATTTTGAGCGAATCGTTTCTCCGTTAAGCCATGGCTC
TGGTCTTGCATGTTGGGCAGGAAAACAAAAATGGATTCAAAGGACTCATT
GCTGCTGAGTACGCTGGTGTGGAAGTCAAATTGGCTGAGAATTTTGAGAT
GGGTGTCACTAATAAATCCCCTGAATTTTTGAAGATGAACCCTCTTGGGA
AGGTTCCTGTGTTGGAGACACCTGATGGTCCGGTTTTTGAGAGCAATGCC
ATTGCCCGTTATGTTGCACGTCTGAAAGCTGACAATCAACTATGTGGTTC
TTCTCTGATCGATTATGCTCATGTTGAGCAGTGGATGGATTTTTCTGCCA
TGGAGATTGATGCTAATATCTCCAGGTGGTTATATCCAAGACTTGGATAT
ATGCAATACATTCCTCTGGCTGAGGAAGGTGCTGTTGCCGCACTGAAGAG
AGCATTGGATGCTTTGAACATTCATTTGGCTTCAAATACGTACTTGGTTG
GCCATTCTGTCACCCTGGCTGACATTGTCATGATATGCAATTTATATTAT
GGATTTAAGCACATCATGACGAAGACTTTCACCTCTGAGTTTCCCCATGT
TGAGAGATACTTTTGGACCGTGGCCAACCAACCAAAAATTAAGAAGTTTT
TGGGTGATTTTAAGCAAGCCGAATCTGTCCCAGCTGTTCAGTCTGCAAAG
AAGCCTGCTCAAGCTAAGGAATCTGCTAAACCAAAGGCCAAGGCGGAACC
AAAGAAAGAAGCACCAAAGCCCAAA
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