CF835629

Overview
NameCF835629
Unique NameCF835629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1G_TRYCR (Elongation factor 1-gamma OS=Trypanosoma cruzi PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.438e-17
Identity = 68/201 (33.83%), Postives = 107/201 (53.23%), Query Frame = 2
Query:   62 VGQENKNGFKGLIAAEYAGVEVKLAENFEMGVTNKSPEFLK-MNPLGKVPVLETPDGPVFESNAIARYVARL-KADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNL--YYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFL 652
            V  EN    K L AA  A V V L +  E G  N++ E+ +  +P G+ PVL+T +G VFESNAI R++ARL ++   L G + ++ + V+ W+DFSA E+DA    +++      +  PL    A+  +   L AL   L + T+LVG  +T+AD+ +   L  +Y       +  T ++ +  R + TV  QPK  + L
Sbjct:    9 VNPENARTHKLLAAAALANVAVTL-KACEYGRENETAEYCRNCSPCGRYPVLQTEEGCVFESNAILRHIARLDRSGGFLYGRTPLEGSQVDMWLDFSATELDAASEPFVHHA---FRGEPL-PANAMDRVHEVLRALEAWLETRTFLVGERMTVADVAVAFALQWHYRLNGAEGEALTKKYRNAYRMYNTVMQQPKTVEVL 204          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: EF1G_SCHPO (Elongation factor 1-gamma OS=Schizosaccharomyces pombe GN=tef3 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17
Identity = 60/180 (33.33%), Postives = 94/180 (52.22%), Query Frame = 2
Query:  104 AEYAGVEVKLAENFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKI 640
            A  AGVEV   E+ ++   N   +     PL K+PV    DG P+ E+ AIA Y+A L     L G++  + A V Q+  F+  E+       + PR+    Y   A + A  A+       +  LAS TYLVG  +TLADI   C L +G  +++TK++ +++ H+ RY+ T+ +Q K+
Sbjct:   22 AAVAGVEV---EHVDVQPHNFPADLAAKFPLQKMPVFVGKDGFPLSETLAIAFYLASLNKTRALNGTTAEEKAKVLQYCSFTNSELPGAFRPIIAPRVFGAPYDEQAAKEAETAIALIFARFDEELASKTYLVGSRLTLADIFFTCFLKFGATYVLTKSYLAKYTHIYRYYQTIYHQAKL 198          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.724e-15
Identity = 62/195 (31.79%), Postives = 96/195 (49.23%), Query Frame = 2
Query:   89 KGLIAAEYAGVEVKLAENFEMGVTNKSPEFLKMNPLGKVPVLETPDGPVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEID----ANISRWLY-PRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADI----VMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKK 646
            + L+A E AGV+ +L         ++ PE L  NP GKVPVLE  D  +FES AIAR+V R      L G  L   A V+ W++  A ++     A +   ++ P LG  +   + +E  V  LK+ L+     LA+ TYL G  ++LAD+    +M C +   +  ++        PHV  ++  +A +P   K
Sbjct:   19 RALLALEEAGVDYELVPMSRQDGDHRRPEHLARNPFGKVPVLEDGDLTLFESRAIARHVLRKHKPELLGGGRLEQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDEN-VEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALV-----HALPHVSAWWQGLAARPAANK 207          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.376e-12
Identity = 54/200 (27.00%), Postives = 97/200 (48.50%), Query Frame = 2
Query:   71 ENKNGFKGLIAAEYAGVEVKLAENFEMGVTNKSPEFLKMNPLGKVPVLETPDGPVFESNAIARYVAR---LKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRL--GYMQYIPLAE---EGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKK 646
            ++ N  + L+  E  G E ++       + +KSPE LK NP G++P  +  D  +FES AI +Y+ R    +  + L   +L + A V+ W +    + ++ IS  +Y  +    M+ IP  +   + +   LK+ L+     L+ +TYL G  V+ AD+      +Y         F S +PHV+ ++  +  +P +KK
Sbjct:   11 QSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDS-YPHVKAWWERLMARPSVKK 209          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: STCT_EMENI (Putative sterigmatocystin biosynthesis protein stcT OS=Emericella nidulans GN=stcT PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.179e-11
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2
Query:  173 EFLKMNPLGKVPVLETPDGPVF-ESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQY----IPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFLG 655
            E+L++NPLGK+P     DG V  ES AIA Y     ++  L G++  +YA + +WM F   EI   +  W  P +G   +    I  +++  +A LK     L+ HL    YLVG +++LAD+ ++  +   F+  + K +  E  ++  +F  V   P +    G
Sbjct:   43 EYLQLNPLGKIPTFVGADGYVLTESIAIALY----DSNTTLLGTTGQEYASIIRWMAFGITEILPALGGWFNPLIGRANFNADNIYQSKDDTLARLK----ILDNHLCGREYLVGETLSLADLFVLGIVQGAFRFFLDKRWRDEHRNLSTWFERVHALPIVVDVAG 200          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 70.0922 bits (170), Expect = 1.540e-11
Identity = 53/191 (27.75%), Postives = 90/191 (47.12%), Query Frame = 2
Query:  101 AAEYAGVEVKLAENFEMGVTNKSPEFLKMNPLGKVPVLETPDGPVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLY-----PRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADI----VMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKK 646
            A E AG + ++         +KSPE L  NP G+VP L+  D  +FES AI +Y AR      L   +L + A V+ W++  A +  A ++  L+     P LG      + +E  +  LK+ L+     L    YL G  ++LAD+    V +C     +  ++       +PHV+ ++  +  +P ++K
Sbjct:   21 ALEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICKYAARKNKPELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDEN-LEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVL-----DAYPHVKAWWSGLMERPSVQK 205          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11
Identity = 54/181 (29.83%), Postives = 79/181 (43.65%), Query Frame = 2
Query:  161 NKSPEFLKMNPLGKVPVLETPDGPVFESNAIARYVARLKADNQLCGSSLI----DYAHVEQWMDFSAMEIDANISRWLY-----PRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTS----------EFPHVERYFWTVANQPKIKK 646
            +K P+FL +NP G++P L   D  +FES AI RY+A   A     G+ L+      A +E W++  +     N S  ++     P LG      + E+ A   L + LD    HLA N YL G   TLAD            H +    TS            PHV+ ++  +A +P  +K
Sbjct:   41 HKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASE---GTDLLPATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHA-EQLAKVLDVYEAHLARNKYLAGDEFTLADA----------NHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQK 207          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11
Identity = 49/165 (29.70%), Postives = 75/165 (45.45%), Query Frame = 2
Query:  161 NKSPEFLKMNPLGKVPVLETPDGPVFESNAIARYVARLKADN--QLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAV-----AALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQP 634
            +K   +L +NP G+VP  E  D  +FES AI +Y+A + ADN  QL          +  WM+    + +   ++  +  LG    I +  + A      A L + LD     LA + YL G S TL D+  I N+YY     + + F S  P V  +   +  +P
Sbjct:   40 HKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTW-ELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSR-PRVSAWCADILARP 202          
BLAST of CF835629 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.981e-11
Identity = 58/189 (30.69%), Postives = 81/189 (42.86%), Query Frame = 2
Query:  107 EYAGVEVKLAENFEMGVTNKSPEFLKMNPLGKVPVLETPDGPVFESNAIARYVARLKAD--NQLCGSSLIDYAHVEQWMDFSAMEIDANISR--W---LYPRLGYMQYIPLAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKHIMTKTFTSEFPHVERYFWTVANQPKIKKFL 652
            E+  +E+K  E+       K   F+  NP GKVP  E  D  +FES AI +Y+A   +D  NQL      D A +   ++  + E D   S+  W   L P  G      + EE   A L + LD     L  + YL     TL D+  I  + Y      TK    E PHV  +   + ++P  KK L
Sbjct:   30 EFVHIELKDGEH-------KKEPFIFRNPFGKVPAFEDGDFKLFESRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEE-EEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQY-LLGTPTKKLFDERPHVSAWVADITSRPSAKKVL 209          
The following BLAST results are available for this feature:
BLAST of CF835629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
EF1G_TRYCR1.438e-1733.83Elongation factor 1-gamma OS=Trypanosoma cruzi PE=... [more]
EF1G_SCHPO1.878e-1733.33Elongation factor 1-gamma OS=Schizosaccharomyces p... [more]
GSTF4_MAIZE8.724e-1531.79Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_ORYSJ2.376e-1227.00Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
STCT_EMENI1.179e-1130.12Putative sterigmatocystin biosynthesis protein stc... [more]
GSTF1_MAIZE1.540e-1127.75Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF3_MAIZE9.981e-1129.83Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF1_TOBAC9.981e-1129.70Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GST11_ARATH9.981e-1130.69Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01J18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01J18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835629 ID=CF835629; Name=CF835629; organism=Citrus sinensis; type=EST; length=775bp
CGCATTCATCTGCATTTTGAGCGAATCGTTTCTCCGTTAAGCCATGGCTC
TGGTCTTGCATGTTGGGCAGGAAAACAAAAATGGATTCAAAGGACTCATT
GCTGCTGAGTACGCTGGTGTGGAAGTCAAATTGGCTGAGAATTTTGAGAT
GGGTGTCACTAATAAATCCCCTGAATTTTTGAAGATGAACCCTCTTGGGA
AGGTTCCTGTGTTGGAGACACCTGATGGTCCGGTTTTTGAGAGCAATGCC
ATTGCCCGTTATGTTGCACGTCTGAAAGCTGACAATCAACTATGTGGTTC
TTCTCTGATCGATTATGCTCATGTTGAGCAGTGGATGGATTTTTCTGCCA
TGGAGATTGATGCTAATATCTCCAGGTGGTTATATCCAAGACTTGGATAT
ATGCAATACATTCCTCTGGCTGAGGAAGGTGCTGTTGCCGCACTGAAGAG
AGCATTGGATGCTTTGAACATTCATTTGGCTTCAAATACGTACTTGGTTG
GCCATTCTGTCACCCTGGCTGACATTGTCATGATATGCAATTTATATTAT
GGATTTAAGCACATCATGACGAAGACTTTCACCTCTGAGTTTCCCCATGT
TGAGAGATACTTTTGGACCGTGGCCAACCAACCAAAAATTAAGAAGTTTT
TGGGTGATTTTAAGCAAGCCGAATCTGTCCCAGCTGTTCAGTCTGCAAAG
AAGCCTGCTCAAGCTAAGGAATCTGCTAAACCAAAGGCCAAGGCGGAACC
AAAGAAAGAAGCACCAAAGCCCAAA
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