CF835638

Overview
NameCF835638
Unique NameCF835638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.411e-37
Identity = 81/196 (41.33%), Postives = 121/196 (61.73%), Query Frame = 3
Query:  129 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELL---GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAW 704
            +KV+G PA  S +RV++ L EK ++FE V V+L  GE +   +L   PFG++P  +DGD  L+ESRAI +Y A +Y +QGT LL    K I +  ++   ++VEAH ++P   +L  + +F   +G   D+ +V E + KL K LDVYE RL + KYLAG+ F+L DL HIP   YL+G   ++ +  +R  V+ W
Sbjct:    4 IKVFGHPASTSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKK-LFTERPRVNEW 198          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 2.407e-37
Identity = 84/197 (42.64%), Postives = 122/197 (61.93%), Query Frame = 3
Query:  129 VKVYGPAYA-SPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQ-LLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDD 713
            +K+YG   + +  R +  L E   E+E VP+D  KGE ++P++L   PFG++P +QDGD  L+ESRAI +Y   K + +   L    ++E  +V+ WLEVE++ Y PA+  +  Q L+    FG P DEK+V+E+ EKL K L+VYE RL+K KYLAGD+ S+ADLSH+  T   +G      ++    HV AWW D
Sbjct:    4 MKLYGSTLSWNVTRCVAVLEEAGAEYEIVPLDFSKGEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRKNKPE--LLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGT-VCLGATPHASVLDAYPHVKAWWTD 197          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 85/199 (42.71%), Postives = 120/199 (60.30%), Query Frame = 3
Query:  117 ATMVVKVYGPAYAS-PKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWW 707
            AT  VKVYG A +    R +L L E  +++E VP+    G+ R PE+L   PFG++PV++DGD  L+ESRAI R+   K++    ELLG   +E+  +V+ WLEVEAH  +P    + ++ +F+   GR  ++ +V E+ EKL K L+VYE RL+   YLAGDF SLADLS     H L+       ++    HVSAWW
Sbjct:    2 ATPAVKVYGWAISPFVSRALLALEEAGVDYELVPMSRQDGDHRRPEHLARNPFGKVPVLEDGDLTLFESRAIARHVLRKHKP---ELLGGGRLEQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMA-TEYAALVHALPHVSAWW 196          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 77/196 (39.29%), Postives = 122/196 (62.24%), Query Frame = 3
Query:  129 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDD 713
            +KV+G PA  + +RV++ L EK ++FE V V+L  GE +   ++   PFG++P  +DGDF ++ESRAI +Y A ++  +G  LL  T ++  ++   +E+E+H ++P   +L  + +    +G   D+ +V+E + KL K LDVYE RL +SKYLA D F+L DL  IP   YL+G   ++ +  +R HVSAW  D
Sbjct:    4 IKVFGHPASTATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDGDFKIFESRAITQYIAHEFSDKGNNLLS-TGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVAD 197          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.943e-35
Identity = 87/203 (42.86%), Postives = 121/203 (59.61%), Query Frame = 3
Query:  129 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKY-RSQGTELLGKT--IEERGLVEQWLEVEAHNYNPAI----YELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHY-LVGPMGRQHMIRDRKHVSAWWD 710
            VKV+G P   +  RV+L L E   E+E VP+D + GE + P++++L PF ++P  QDGD +L+ESRAI +Y   KY  + G +LLG+   IEE  +V+ W EVEA  Y PAI    +E  I        G   ++ +V ES E+L   L +YE RL KS+YLAGD  + ADL+HIPFT Y +  P  +  +  D   V AWW+
Sbjct:    4 VKVFGHPMLTNVARVLLFLEEVGAEYELVPMDFVAGEHKRPQHVQLNPFAKMPGFQDGDLVLFESRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAK--VFDDYPKVKAWWE 204          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 5.019e-35
Identity = 76/196 (38.78%), Postives = 120/196 (61.22%), Query Frame = 3
Query:  129 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDD 713
            +KV+G PA  + +RV++ L EK ++FE V ++L  GE +   ++   PFG++P  +DGDF L+ESRAI +Y A  Y  +G +L+    ++   +   +E+E+H ++P   +L  + +    +G   D+ +V+E + KL K LDVYE RL +SKYLA D F+L DL  IP   YL+G   ++ +  +R HVSAW  D
Sbjct:    4 IKVFGHPASTATRRVLIALHEKNLDFEFVHIELKDGEHKKEPFIFRNPFGKVPAFEDGDFKLFESRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVAD 198          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 147.132 bits (370), Expect = 8.562e-35
Identity = 83/195 (42.56%), Postives = 117/195 (60.00%), Query Frame = 3
Query:  129 VKVYGPAYA-SPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWW 707
            +K+YG   + +  R    L E   ++E VP++    E +SPE+L   PFG++P +QDGD  L+ESRAI +Y A K +    ELL +  +EE  +V+ W+EVEA+ Y  A+  +  Q+L S   G   D+K+V E+ EKL K L+VYE RL+K KYLAGDF SLADL+H+  T  L        ++    HV AWW
Sbjct:    4 MKLYGAVMSWNLTRCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICKYAARKNKP---ELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFA-TPYASVLDAYPHVKAWW 194          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.136e-33
Identity = 85/203 (41.87%), Postives = 119/203 (58.62%), Query Frame = 3
Query:  129 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKY-RSQGTELLGKT--IEERGLVEQWLEVEAHNYNPAI----YELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHY-LVGPMGRQHMIRDRKHVSAWWD 710
            VKV+G P   +  RV+L L E   E+E VPVD + GE + P++++L PF ++P  QDG+ +  +SRAI +Y   KY  + G +LLG+   IEE  +V+ W EVEA  Y PAI    +E  I        G   ++ +V ES E+L   L +YE RL KS+YLAGD  S ADL+HIPFT Y +  P  +  +  +   V AWW+
Sbjct:    4 VKVFGHPMLTNVARVLLFLEEVGAEYELVPVDFVAGEHKRPQHVQLNPFAKMPGFQDGESLHIKSRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAK--VFDEYPKVKAWWE 204          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF5_ARATH (Glutathione S-transferase PM239X14 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.168e-29
Identity = 81/203 (39.90%), Postives = 116/203 (57.14%), Query Frame = 3
Query:  123 MVVKVYGPAYAS-PKRVILCLVEKEIEFETVPVDLIKGEQRSPEYL-KLQPFGELPVIQDGDFI-LYESRAIMRYYAEKYRSQGTELLGKTIEER--GLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQ---HMIRDRKHVSAWW 707
            + VK+YG AY++  KRV     E  ++ + VPVDL+KGE + P YL    PFG +PV++D D   +YESRAI RY   KY  +G+ LL    + +  GL EQ   VE  +++P    L  + +F+   G   +E+L K+  + L   +D YE  LSK KYLAG+ F+LADL H+P+     G M  Q    ++  + HV AWW
Sbjct:    2 VTVKLYGMAYSTCTKRVYTTAKEIGVDVKIVPVDLMKGEHKEPAYLDNYHPFGVIPVLEDEDGTKIYESRAISRYLVAKY-GKGSSLLPSPSDPKAYGLFEQAASVEYSSFDPPASSLAYERVFAGMRGLKTNEELAKKYVDTLNAKMDGYERILSKQKYLAGNDFTLADLFHLPY-----GAMVAQLEPTVLDSKPHVKAWW 198          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTT2_MUSDO (Glutathione S-transferase 2 OS=Musca domestica GN=Gst2 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 3
Query:  138 YGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLS 623
            Y P  A  + VI+      IE     ++L +GE   PE+LK+ P   +P + D  F ++ESRAIM Y  EKY  Q   L     ++R L+ Q L  +      +  + T      +K   P D +L K+ +  L + L+++   LS+SKY AG+  +LADL+
Sbjct:    5 YLPLSAPCRSVIMTAKALGIELNKKLLNLFEGEHLKPEFLKINPQHTIPTLVDNGFAMWESRAIMVYLVEKYGKQNDPLYPSCPKKRALINQRLYFDMGTLWKSYADYTYPQFRENK---PADPELFKKFESAL-EFLNIF---LSQSKYAAGETMTLADLA 159          
The following BLAST results are available for this feature:
BLAST of CF835638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
GST16_ARATH1.411e-3741.33Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF2_ORYSJ2.407e-3742.64Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF4_MAIZE7.744e-3642.71Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_ARATH7.744e-3639.29Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GSTF1_WHEAT2.943e-3542.86Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GST11_ARATH5.019e-3538.78Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF1_MAIZE8.562e-3542.56Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF2_WHEAT6.136e-3341.87Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF5_ARATH9.168e-2939.90Glutathione S-transferase PM239X14 OS=Arabidopsis ... [more]
GSTT2_MUSDO2.424e-1332.72Glutathione S-transferase 2 OS=Musca domestica GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_01J24_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01J24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835638 ID=CF835638; Name=CF835638; organism=Citrus sinensis; type=EST; length=713bp
ACGATCCCACTATGGCGCCACTATATTAGCCTATATAAAAGGGATTAGCA
AACTGCCCGTAGATTACGATCACAAGCTCAATAGCTGCTTTTTATCGACA
GAAAAAGTTAACACCAGCAACGATGGTGGTCAAGGTGTACGGTCCGGCTT
ATGCTTCTCCCAAACGAGTGATTTTGTGCTTGGTTGAGAAGGAAATCGAA
TTTGAAACTGTCCCCGTTGATCTCATCAAAGGAGAGCAGAGAAGTCCTGA
GTACCTCAAATTACAGCCTTTTGGAGAGCTTCCTGTCATTCAAGATGGAG
ATTTTATTTTATACGAGTCGCGAGCTATCATGAGGTACTATGCCGAAAAG
TACAGGTCTCAAGGAACCGAACTTCTGGGTAAAACAATTGAAGAAAGAGG
CCTGGTGGAACAGTGGCTAGAAGTAGAGGCACACAACTACAACCCAGCAA
TTTACGAGCTGACCATCCAACTTTTATTTTCTTCCAAGTTTGGACGTCCC
GTTGATGAAAAATTGGTGAAGGAGAGTGACGAAAAGCTTGGAAAAACGCT
CGACGTTTACGAGGAGAGGCTCTCAAAGAGCAAGTATTTGGCTGGTGATT
TCTTCAGCCTGGCTGATCTGAGTCACATTCCATTTACCCACTACTTGGTT
GGGCCGATGGGGAGACAGCATATGATTAGAGACAGGAAGCATGTGAGTGC
TTGGTGGGATGAT
back to top