CF835638

Overview
NameCF835638
Unique NameCF835638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1117 contig Csv1_Contig1117:1..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GST1C_ANOGA (Glutathione S-transferase 1, isoform C OS=Anopheles gambiae GN=GstD1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 56/194 (28.87%), Postives = 94/194 (48.45%), Query Frame = 3
Query:  138 YGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIP--FTHYLVGPMGRQHMIRDRKHVSAWWDD 713
            Y P  A  + V +      +E      DL+KGE   PE+LK+ P   +P + D  F L+ESRAI  Y AEKY  +  +L  K  ++R +V Q +  +         +     +F+ +   P +E+ +K++   L   LD +       KY+AGD  ++ADLS +    T+ + G       +   +HV+AW+++
Sbjct:    5 YLPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKINPQHCIPTLVDNGFALWESRAICTYLAEKY-GKDDKLYPKDPQKRAVVNQRMYFDMGTLYQRFADYYYPQIFAKQPANPENEQKMKDAVGFLNSFLDGH-------KYVAGDSLTIADLSILATISTYDVAG-----FDLAKYQHVAAWYEN 185          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTT4_MUSDO (Glutathione S-transferase 4 OS=Musca domestica GN=Gst4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 55/163 (33.74%), Postives = 77/163 (47.24%), Query Frame = 3
Query:  138 YGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSS-KFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLS 623
            Y P  A  + V++      IE     + L +G    PE+LK+ P   +P + D  F L+ESRAIM Y  EKY  Q   L     ++R L+ Q L  +       +Y+      +   K  +P D +L K    K   TLD     LS+SKY AGD  +LADL+
Sbjct:    5 YLPLSAPCRSVLMTAKALGIELNKKLLKLFEGGHLKPEFLKINPQHTIPTLVDNGFALWESRAIMVYLVEKYGKQDDPLYPSCPKKRALINQRLYFDM----GTLYQGFANYFYPQFKEKKPADPELFK----KFEVTLDFLNTFLSESKYAAGDSLTLADLA 159          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTT3_MUSDO (Glutathione S-transferase 3 OS=Musca domestica GN=Gst3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 53/162 (32.72%), Postives = 81/162 (50.00%), Query Frame = 3
Query:  138 YGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLS 623
            Y P  A  + VI+      IE     ++L +GE   PE+LK+ P   +P + D  F ++ESRAIM Y  EKY  Q   L     ++R L+ Q L  +      +  + T      +K   P D +L K+ +  L + L+++   LS+SKY AG   +LADL+
Sbjct:    5 YLPLSAPCRSVIMTAKALGIELNKKLLNLFEGEHLKPEFLKINPQHTIPTLVDNGFAMWESRAIMVYLVEKYGKQNDPLYPSCPKKRALINQRLYFDMGTLWKSYADYTYPQFRENK---PADPELFKKFESAL-EFLNIF---LSQSKYAAGQTMTLADLA 159          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTT4_MOUSE (Glutathione S-transferase theta-4 OS=Mus musculus GN=Gstt4 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 55/197 (27.92%), Postives = 99/197 (50.25%), Query Frame = 3
Query:  123 MVVKVYGPAYASPKRVILCLVEKE-IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYN-PAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK-YLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAW 704
            M +++Y    ++P R +     K  I F+   VDL+KG   S EY+++ P  +LP ++DG FIL ES AI+ Y   KY S  +      +  R  V++++  +      P    L I+L+     G  V  + ++++ +++ + L  +EE+  + K ++ GD  SLADL  +     ++ PMG  H +     ++ W
Sbjct:    1 MGLELYMDLLSAPCRAVYIFARKNGIPFDFQFVDLLKGHHHSKEYIEINPLRKLPSLKDGKFILSESVAILFYLCRKY-SAPSHWYPPDLHMRARVDEFMAWQHTAIQVPMSKILWIKLIIPMITGEEVPTERLEKTLDEVKRNLQQFEEKFLQDKMFITGDHISLADLVALV---EMMQPMGSNHNVFVSSKLAEW 193          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 55/158 (34.81%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  165 RVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLS--KSKYLAGDFFSLADLSHIP 632
            RV + L  K ++FE   VDL KGE  +PE+LKL P G +PV+  GD ++ +S AI+ Y  EK+      LL + +++R L  Q   +   N  P +  L +      K G   DEKL   +   + K     E+ L     KY  GD   LADL   P
Sbjct:   22 RVRIALHLKGLDFEYKAVDLFKGEHLTPEFLKLNPLGYVPVLVHGDIVIADSLAIIMYLEEKFPE--NPLLPQDLQKRALNYQAANIVTSNIQP-LQNLAVLNYIEEKLGS--DEKL-SWAKHHIKKGFSALEKLLKGHAGKYATGDEVGLADLFLAP 173          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTT4_RAT (Glutathione S-transferase theta-4 OS=Rattus norvegicus GN=Gstt4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12
Identity = 54/197 (27.41%), Postives = 98/197 (49.75%), Query Frame = 3
Query:  123 MVVKVYGPAYASPKRVILCLVEKE-IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYN-PAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK-YLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAW 704
            M +++Y    ++P R +     K  I F+   VDL+KG   S EY+++ P  ++P ++DG FIL ES AI+ Y   KY S  +      +  R  V++++  +      P    L I+L+     G  V  + + ++ +++ K +  +EE+  + K ++ GD  SLADL  +     ++ PMG  H +     ++ W
Sbjct:    1 MGLELYMDLLSAPCRAVYIFARKNGIPFDFQFVDLLKGHHHSKEYIEINPLRKVPSLRDGKFILSESVAILCYLCRKY-SAPSHWYPPDLHMRARVDEFMAWQHTAIQVPMSKILWIKLIIPMITGEEVPTERLDKTLDEVNKNIKQFEEKFLQDKLFITGDHISLADLVALV---EMMQPMGTNHNVFISSKLAEW 193          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTT3_DROME (Glutathione S-transferase D3 OS=Drosophila melanogaster GN=GstD3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12
Identity = 42/143 (29.37%), Postives = 74/143 (51.75%), Query Frame = 3
Query:  195 IEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLS 623
            +EF    ++ +KGEQ +P+++K+ P   +P + D  F ++ESRAI+ Y  EKY  +   L  K I+++ ++ Q L  +     P +     +   + +FG   D K V+E       T D     L    Y+AGD +++AD++
Sbjct:    8 LEFNKKIINTLKGEQMNPDFIKINPQHSIPTLVDNGFTIWESRAILVYLVEKY-GKDDALYPKDIQKQAVINQRLYFDMALMYPTLANYYYKAFTTGQFGSEEDYKKVQE-------TFDFLNTFLEGQDYVAGDQYTVADIA 142          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTT4_HUMAN (Glutathione S-transferase theta-4 OS=Homo sapiens GN=GSTT4 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-12
Identity = 50/169 (29.59%), Postives = 89/169 (52.66%), Query Frame = 3
Query:  123 MVVKVYGPAYASPKRVILCLVEK-EIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELT-IQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSK-YLAGDFFSLADL 620
            M +++Y    + P R +    +K +I FE   VDLIKG   S EY+ + P  +LP ++DG FIL ES AI+ Y   KY S  +      +  R  V++++  +   +   + ++  ++LL     G  V  + ++ + E++  +L ++EE   + K ++ G+  SLADL
Sbjct:    1 MGLELYLDLLSQPCRAVYIFAKKNDIPFELRIVDLIKGHHHSKEYIDINPLRKLPSLKDGKFILSESAAILYYLCRKY-SAPSHWCPPDLHARARVDEFVAWQHTAFQLPMKKIVWLKLLIPKITGEEVSAEKMEHAVEEVKNSLQLFEEYFLQDKMFITGNQISLADL 168          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTT1_LUCCU (Glutathione S-transferase 1-1 OS=Lucilia cuprina GN=GST1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.970e-12
Identity = 50/162 (30.86%), Postives = 77/162 (47.53%), Query Frame = 3
Query:  138 YGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLS 623
            Y P  A  + V++      IE     ++L  GE   PE+LK+ P   +P + DGDF L+ESRAIM Y  EKY  +   L  K  ++R ++ Q L  +      +  +     +F+     P D +L K    K+    D     L   +Y+AGD  ++ADL+
Sbjct:    5 YLPGSAPCRSVLMTAKALGIELNKKLLNLQAGEHLKPEFLKINPQHTIPTLVDGDFALWESRAIMVYLVEKY-GKNDSLFPKCPKKRAVINQRLYFDMGTLYKSFADYYYPQIFAK---APADPELYK----KMEAAFDFLNTFLEGHQYVAGDSLTVADLA 158          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTT1_MUSDO (Glutathione S-transferase 1 OS=Musca domestica GN=Gst1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11
Identity = 50/162 (30.86%), Postives = 76/162 (46.91%), Query Frame = 3
Query:  138 YGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLS 623
            Y P  A  + V++      IE     ++L  GE   PE+LK+ P   +P + DGDF L+ESRAIM Y  EKY  +   L  K  ++R ++ Q L  +      +  +     +F+     P D +L K    K+    D     L   +Y AGD  ++ADL+
Sbjct:    5 YLPGSAPCRSVLMTAKALGIELNKKLLNLQAGEHLKPEFLKINPQHTIPTLVDGDFALWESRAIMVYLVEKY-GKTDSLFPKCPKKRAVINQRLYFDMGTLYKSFADYYYPQIFAK---APADPELFK----KIETAFDFLNTFLKGHEYAAGDSLTVADLA 158          
The following BLAST results are available for this feature:
BLAST of CF835638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
GST1C_ANOGA3.166e-1328.87Glutathione S-transferase 1, isoform C OS=Anophele... [more]
GSTT4_MUSDO4.135e-1333.74Glutathione S-transferase 4 OS=Musca domestica GN=... [more]
GSTT3_MUSDO4.135e-1332.72Glutathione S-transferase 3 OS=Musca domestica GN=... [more]
GSTT4_MOUSE5.400e-1327.92Glutathione S-transferase theta-4 OS=Mus musculus ... [more]
GSTZ1_DIACA9.211e-1334.81Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]
GSTT4_RAT1.203e-1227.41Glutathione S-transferase theta-4 OS=Rattus norveg... [more]
GSTT3_DROME2.052e-1229.37Glutathione S-transferase D3 OS=Drosophila melanog... [more]
GSTT4_HUMAN2.680e-1229.59Glutathione S-transferase theta-4 OS=Homo sapiens ... [more]
GSTT1_LUCCU5.970e-1230.86Glutathione S-transferase 1-1 OS=Lucilia cuprina G... [more]
GSTT1_MUSDO1.737e-1130.86Glutathione S-transferase 1 OS=Musca domestica GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01J24_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01J24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835638 ID=CF835638; Name=CF835638; organism=Citrus sinensis; type=EST; length=713bp
ACGATCCCACTATGGCGCCACTATATTAGCCTATATAAAAGGGATTAGCA
AACTGCCCGTAGATTACGATCACAAGCTCAATAGCTGCTTTTTATCGACA
GAAAAAGTTAACACCAGCAACGATGGTGGTCAAGGTGTACGGTCCGGCTT
ATGCTTCTCCCAAACGAGTGATTTTGTGCTTGGTTGAGAAGGAAATCGAA
TTTGAAACTGTCCCCGTTGATCTCATCAAAGGAGAGCAGAGAAGTCCTGA
GTACCTCAAATTACAGCCTTTTGGAGAGCTTCCTGTCATTCAAGATGGAG
ATTTTATTTTATACGAGTCGCGAGCTATCATGAGGTACTATGCCGAAAAG
TACAGGTCTCAAGGAACCGAACTTCTGGGTAAAACAATTGAAGAAAGAGG
CCTGGTGGAACAGTGGCTAGAAGTAGAGGCACACAACTACAACCCAGCAA
TTTACGAGCTGACCATCCAACTTTTATTTTCTTCCAAGTTTGGACGTCCC
GTTGATGAAAAATTGGTGAAGGAGAGTGACGAAAAGCTTGGAAAAACGCT
CGACGTTTACGAGGAGAGGCTCTCAAAGAGCAAGTATTTGGCTGGTGATT
TCTTCAGCCTGGCTGATCTGAGTCACATTCCATTTACCCACTACTTGGTT
GGGCCGATGGGGAGACAGCATATGATTAGAGACAGGAAGCATGTGAGTGC
TTGGTGGGATGAT
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