CF835668

Overview
NameCF835668
Unique NameCF835668
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: CDK4_BOVIN (Cell division protein kinase 4 OS=Bos taurus GN=CDK4 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 47/155 (30.32%), Postives = 79/155 (50.97%), Query Frame = 3
Query:  273 TAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAK---RTLREIKLLRHMD---HENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQ--ALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 713
            T++Y+P +  IG GAYG V  A +  +   VA+K +               T+RE+ LLR ++   H NVV + D+    + +    V + +E +D DL   +       L  E  +  + Q LRGL ++H+  ++HRDLKP N+L+ +   +K+
Sbjct:    3 TSRYEP-VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGAGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATARTDRETKVTLVFEHVDQDLRTYLDKAPPPGLPVETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL 156          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: CHK2_HUMAN (Serine/threonine-protein kinase Chk2 OS=Homo sapiens GN=CHEK2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 48/147 (32.65%), Postives = 80/147 (54.42%), Query Frame = 3
Query:  303 IGKGAYGIVCSALNSETNEHVAIKKIAN---AFDNKIDAKRTLR---EIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDT-DLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKI 713
            +G GA G V  A   +T + VAIK I+    A  +  +A   L    EI++L+ ++H  ++ I++           D YI  ELM+  +L   +  N+ L E  C+ + YQ+L  ++Y+H   ++HRDLKP N+LL++   +C +KI
Sbjct:  226 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI 366          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: CDK9_BOVIN (Cell division protein kinase 9 OS=Bos taurus GN=CDK9 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 50/155 (32.26%), Postives = 84/155 (54.19%), Query Frame = 3
Query:  267 EVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDII---PPPQRESFNDVYIAYELMDTDLHQIIRS---NQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 713
            EVT KY+  +  IG+G +G V  A + +T + VA+KK+    + +      LREIK+L+ + HENVV + +I      P       +Y+ ++  + DL  ++ +      LSE   +  +  +L GL YIH   +LHRD+K +N+L+  +  LK+
Sbjct:   15 EVT-KYEK-LAKIGQGTFGEVFKAKHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL 165          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: CDK4_RAT (Cell division protein kinase 4 OS=Rattus norvegicus GN=Cdk4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 48/156 (30.77%), Postives = 80/156 (51.28%), Query Frame = 3
Query:  273 TAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKI----ANAFDNKIDAKRTLREIKLLRHMD---HENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQ--ALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 713
            T +Y+P +  IG GAYG V  A +  +   VA+K +      A    +    T+RE+ LLR ++   H NVV + D+    + +    V + +E +D DL   +       L  E  +  + Q L GL ++H+  ++HRDLKP N+L+ +N  +K+
Sbjct:    3 TTRYEP-VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGAAGGGLPVS-TVREVALLRRLEAFEHPNVVRLMDVCATSRTDRDIKVTLVFEHIDQDLRTYLDKAPPPGLPVETIKDLMRQFLSGLDFLHANCIVHRDLKPENILVTSNGTVKL 156          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: CDK11_RAT (Cell division protein kinase 11 OS=Rattus norvegicus GN=Cdk11 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 42/138 (30.43%), Postives = 75/138 (54.35%), Query Frame = 3
Query:  303 IGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRS-NQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 713
            I +G YG+V  A + +T+E VA+K++    + +     ++REI  +    H N+V +R+I+      + + +YI    ++ DL  ++ +  Q       +  + Q+L G+K++H   +LHRDLK SNLLL     LK+
Sbjct:   85 IEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPLTSIREINTILKAQHPNIVTVREIV---VGSNMDKIYIVMNYVEHDLKSLMETMKQPFLPGEVKTLMIQLLSGVKHLHDNWILHRDLKTSNLLLTHAGILKV 219          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: BUR1_EMENI (Serine/threonine-protein kinase bur1 OS=Emericella nidulans GN=ptkA PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 43/141 (30.50%), Postives = 75/141 (53.19%), Query Frame = 3
Query:  303 IGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFN---DVYIAYELMDTDLHQIIRSNQA-LSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 713
            +G+G +G V  A        VA+KKI    +        LREIKLL+ + H N++ +R++     +        +Y+ +  M+ DL  ++ + +   SE   + ++ Q+L GLKY+H   +LHRD+K +NLL++    L+I
Sbjct:   31 LGEGTFGEVYKARAKRDGSIVALKKILMHNERDGFPITALREIKLLKMLSHTNIMQLREMAVERSKGEGRKKPSMYMVFPYMEHDLSGLLENPEVHFSEAQIKCYMIQLLEGLKYLHGNCILHRDMKAANLLISNQGILQI 171          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: BUR1_ASPFU (Serine/threonine-protein kinase bur1 OS=Aspergillus fumigatus GN=bur1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 42/141 (29.79%), Postives = 76/141 (53.90%), Query Frame = 3
Query:  303 IGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFN---DVYIAYELMDTDLHQIIRSNQA-LSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 713
            +G+G +G V  A + +    VA+KKI    +        LREIKLL+ + H N++ ++++     +        +Y+    M+ DL  ++ +     +E   + ++ Q+L GLKY+H   +LHRD+K +NLL++ N  L+I
Sbjct:   31 LGEGTFGEVYKARSKKDGSIVALKKILMHNEKDGFPITALREIKLLKMLSHRNILQLKEMAVERSKGDGRKKPSMYMVTPYMEHDLSGLLENPAVNFTEPQIKCYMLQLLEGLKYLHGNRILHRDMKAANLLISNNGVLQI 171          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: ARK1_SCHPO (Serine/threonine-protein kinase ark1 OS=Schizosaccharomyces pombe GN=ark1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 42/141 (29.79%), Postives = 79/141 (56.03%), Query Frame = 3
Query:  300 PIGKGAYGIVCSALNSETNEHVAIKKI--ANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDT-DLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 713
            P+GKG +G V  A   +T   VA+K +  +    +KI+ K+  REI++  ++ H+N++ +       +R     +Y+  E     +L+Q +R  +  SEE    +++Q+   L Y+H  +V+HRD+KP N+LL  + ++K+
Sbjct:   94 PLGKGKFGRVYLAKEKKTGFIVALKTLHKSELVQSKIE-KQVRREIEIQSNLRHKNILRLYGHFHDEKR-----IYLILEFAGRGELYQHLRRAKRFSEEVASKYIFQMANALSYLHKKHVIHRDIKPENILLGIDGEIKL 228          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: Y0146_DICDI (Probable serine/threonine-protein kinase DDB_G0270146 OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 44/139 (31.65%), Postives = 72/139 (51.80%), Query Frame = 3
Query:  303 IGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEH--CQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 713
            IGKGA+  V   LN+ + + VAIK+   +  +         E  +L+ ++HEN+V I       + E+ N +YI  E M+      I +N     E   C Y +  +L+GL Y+H   V+HRD+K +N+L+N   + K+
Sbjct:   83 IGKGAFATVFKGLNTLSGDFVAIKRFEKSKISNEQHSSVSTEFDILQRLNHENIVRILG-----REENENYIYIFLEYMENGSLSTILNNFGTFPESLICNY-VENVLKGLVYLHQEGVIHRDIKAANILINKAGEAKL 215          
BLAST of CF835668 vs. ExPASy Swiss-Prot
Match: STK11_MOUSE (Serine/threonine-protein kinase 11 OS=Mus musculus GN=Stk11 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 45/141 (31.91%), Postives = 76/141 (53.90%), Query Frame = 3
Query:  303 IGKGAYGIVCSALNSETNEHVAIKKIANAFDNKID--AKRTLREIKLLRHMDHENVVAIRDIIPPPQRESFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLY--QILRGLKYIHSANVLHRDLKPSNLLLNANCDLKI 713
            +G+G+YG V   L+SET    A+K +      +I        +EI+LLR + H NV+ + D++   +++    +Y+  E     + +++ S        CQ   Y  Q++ GL+Y+HS  ++H+D+KP NLLL  N  LKI
Sbjct:   55 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHRNVIQLVDVLYNEEKQK---MYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFRQLIDGLEYLHSQGIVHKDIKPGNLLLTTNGTLKI 192          
The following BLAST results are available for this feature:
BLAST of CF835668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK4_BOVIN3.529e-1230.32Cell division protein kinase 4 OS=Bos taurus GN=CD... [more]
CHK2_HUMAN4.609e-1232.65Serine/threonine-protein kinase Chk2 OS=Homo sapie... [more]
CDK9_BOVIN4.609e-1232.26Cell division protein kinase 9 OS=Bos taurus GN=CD... [more]
CDK4_RAT4.609e-1230.77Cell division protein kinase 4 OS=Rattus norvegicu... [more]
CDK11_RAT4.609e-1230.43Cell division protein kinase 11 OS=Rattus norvegic... [more]
BUR1_EMENI4.609e-1230.50Serine/threonine-protein kinase bur1 OS=Emericella... [more]
BUR1_ASPFU4.609e-1229.79Serine/threonine-protein kinase bur1 OS=Aspergillu... [more]
ARK1_SCHPO4.609e-1229.79Serine/threonine-protein kinase ark1 OS=Schizosacc... [more]
Y0146_DICDI6.019e-1231.65Probable serine/threonine-protein kinase DDB_G0270... [more]
STK11_MOUSE6.019e-1231.91Serine/threonine-protein kinase 11 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01K19_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01K19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835668 ID=CF835668; Name=CF835668; organism=Citrus sinensis; type=EST; length=716bp
TTCAATCCTTAACACTAGCACGTAGCATATCACTGAGCATGATCCCAGCA
CTCAAGTAACAAGAAGCCCCGATAAAGAAAGCGAGCGATAAAATGGAAGG
TGGGCCCCCGGCGGCGGACACGGAGATGGCGGAGGCGCAGCCCGACCCAC
AGCAGACGGCGGCTCCAGCAGCTGCAGCTCCAGCGGCAGGGGGGATCGAG
AGCATCCCGGCGACTTTGAGCCACGGAGGGAGGTTTATACAATATAACAT
TTTTGGTAACATTTTTGAGGTTACTGCTAAGTATAAGCCACCGATTATGC
CCATCGGGAAAGGTGCATACGGCATCGTTTGTTCGGCACTAAACTCGGAG
ACGAATGAGCACGTGGCGATAAAAAAGATAGCTAATGCATTCGATAACAA
AATTGATGCAAAGAGGACGCTTCGTGAGATCAAGTTGCTTCGACACATGG
ATCATGAAAACGTTGTTGCAATCAGGGATATAATACCGCCACCACAAAGG
GAATCATTTAATGATGTTTATATTGCATATGAGCTCATGGATACTGACCT
GCATCAGATAATTCGTTCCAATCAAGCATTATCAGAGGAGCACTGTCAGT
ATTTCCTGTATCAGATCCTCCGTGGACTTAAATACATACATTCTGCAAAT
GTTCTTCACAGGGATTTGAAACCTAGCAATCTCCTCCTGAATGCCAACTG
TGACTTAAAAATATGT
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