CF835677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2A1_ARATH (Probable histone H2A.1 OS=Arabidopsis thaliana GN=At1g51060 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.453e-38 Identity = 83/114 (72.81%), Postives = 86/114 (75.44%), Query Frame = -1 Query: 205 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 546 A K+ +RS KAGLQFPVGRIARFLK GKYAERVGAGAP AGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 13 AKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASK 126
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2A2_ARATH (Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.122e-38 Identity = 84/114 (73.68%), Postives = 85/114 (74.56%), Query Frame = -1 Query: 205 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 546 A KS SRS KAGLQFPVGRIARFLK GKYA RVGAGAP AGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 13 AKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASK 126
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSJ (Probable histone H2A.2 OS=Oryza sativa subsp. japonica GN=Os07g0545400 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.302e-38 Identity = 82/111 (73.87%), Postives = 88/111 (79.28%), Query Frame = -1 Query: 214 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMG 546 A K++SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP AGNAARDNKK RIVPRHIQLAVRNDEELS+LLG+VTIA+GGV+PNIH LLPKK G Sbjct: 13 AKKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAG 123
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSI (Probable histone H2A.2 OS=Oryza sativa subsp. indica GN=OsI_025469 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.302e-38 Identity = 82/111 (73.87%), Postives = 88/111 (79.28%), Query Frame = -1 Query: 214 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMG 546 A K++SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP AGNAARDNKK RIVPRHIQLAVRNDEELS+LLG+VTIA+GGV+PNIH LLPKK G Sbjct: 13 AKKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAG 123
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2A8_ORYSI (Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.215e-37 Identity = 82/114 (71.93%), Postives = 86/114 (75.44%), Query Frame = -1 Query: 205 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 546 A K+ SRS K GLQFPVGRIARFLKAGKYAERVGAGAP AGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG TIA+GGV+PNIHQ LLPKK G K Sbjct: 13 AKKATSRSSKGGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2A4_WHEAT (Histone H2A.4 OS=Triticum aestivum GN=TH254 PE=2 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 2.072e-37 Identity = 82/114 (71.93%), Postives = 86/114 (75.44%), Query Frame = -1 Query: 205 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 546 A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP AGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG TIA+GGV+PNIHQ LLPKK K Sbjct: 13 AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKASSSK 126
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2A2_PICGU (Histone H2A.2 OS=Pichia guilliermondii GN=HTA2 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.144e-34 Identity = 78/120 (65.00%), Postives = 86/120 (71.67%), Query Frame = -1 Query: 178 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 537 S SRS KAGL FPVGRI R L+ G YA+RVG+GAP AGNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GKG ASQE Sbjct: 14 STSRSAKAGLTFPVGRIHRLLRKGNYAQRVGSGAPVYLTSVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSGKG----DKASQE 129
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2A_PLAFA (Histone H2A OS=Plasmodium falciparum PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.777e-34 Identity = 78/125 (62.40%), Postives = 88/125 (70.40%), Query Frame = -1 Query: 175 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQEF 549 KASK S S KAGLQFPVGRI R+LK GKYA+RVGAGAP AGNAARDNKK+RI PRHIQLAVRNDEEL+K L VT A+GGVLPNIH LLPK K + G+A+Q++ Sbjct: 11 KASKGTSNSAKAGLQFPVGRIGRYLKKGKYAKRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRITPRHIQLAVRNDEELNKFLAGVTFASGGVLPNIHNVLLPK---KSQLKAGTANQDY 132
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2A1_DEBHA (Histone H2A.1 OS=Debaryomyces hansenii GN=HTA1 PE=3 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 4.777e-34 Identity = 77/120 (64.17%), Postives = 86/120 (71.67%), Query Frame = -1 Query: 178 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 537 S SRS KAGL FPVGR+ R L+ G YA+RVG+GAP AGNAARDNKK+RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK KGK ASQE Sbjct: 15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKSAKGK-----ASQE 129
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2A_MAGGR (Histone H2A OS=Magnaporthe grisea GN=HTA1 PE=2 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 6.239e-34 Identity = 77/118 (65.25%), Postives = 85/118 (72.03%), Query Frame = -1 Query: 178 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 531 SRS KAGL FPVGR+ R L+ G YA+RVGAGAP AGNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK G +ASQE Sbjct: 19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGKTAGG-KNASQE 135 The following BLAST results are available for this feature:
BLAST of CF835677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835677 ID=CF835677; Name=CF835677; organism=Citrus sinensis; type=EST; length=651bpback to top |