CF835677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2AV2_ORYSJ (Probable histone H2A variant 2 OS=Oryza sativa subsp. japonica GN=Os10g0418000 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.051e-17 Identity = 53/105 (50.48%), Postives = 65/105 (61.90%), Query Frame = -1 Query: 223 VSRSHKAGLQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 534 VSRS +AG+QFPVGRI R LK A RVGA A AGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K Sbjct: 32 VSRSSRAGIQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 135
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2AZ_LODEL (Histone H2A.Z OS=Lodderomyces elongisporus GN=HTZ1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.182e-16 Identity = 55/111 (49.55%), Postives = 67/111 (60.36%), Query Frame = -1 Query: 223 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAE---RVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 546 A S S S +AGLQFPVGR+ R+LK K A+ RVG+ A AGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K Sbjct: 18 AKSSTSHSARAGLQFPVGRVKRYLK--KQAQNKIRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLI-KATIAYGGVLPHINKALLLK 125
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2AZ_YEAST (Histone H2A.Z OS=Saccharomyces cerevisiae GN=HTZ1 PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 1.544e-16 Identity = 54/112 (48.21%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 208 KSVSRSHKAGLQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKG 540 +S S S +AGLQFPVGRI R+LK RVG+ A AGNAA+D K RI PRH+QLA+R D+EL L+ TIA+GGVLP+I++ LL K KG Sbjct: 21 RSQSSSARAGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLKVEKKG 131
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2AZ_PICGU (Histone H2A.Z OS=Pichia guilliermondii GN=HTZ1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.544e-16 Identity = 53/109 (48.62%), Postives = 66/109 (60.55%), Query Frame = -1 Query: 223 ASKSVSRSHKAGLQFPVGRIARFLK-AGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 546 A S S S +AGLQFPVGRI R+LK + + RVG+ + AGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K Sbjct: 18 AKASTSHSARAGLQFPVGRIKRYLKRSAQNKVRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLI-KATIAYGGVLPHINKALLLK 125
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2AZ_EMENI (Histone H2A.Z OS=Emericella nidulans GN=htz1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.544e-16 Identity = 59/118 (50.00%), Postives = 67/118 (56.78%), Query Frame = -1 Query: 199 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGD 549 KA KS S KAGLQFP GR+ RFLK + RVGA A AGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP I++ LL K K K D Sbjct: 21 KAQKS--HSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAFGGVLPRINRALLLKVEQKKKKD 135
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2AZ_PICST (Histone H2A.Z OS=Pichia stipitis GN=HTZ1 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.016e-16 Identity = 53/109 (48.62%), Postives = 65/109 (59.63%), Query Frame = -1 Query: 223 ASKSVSRSHKAGLQFPVGRIARFLK-AGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 546 A S S S +AGLQFPVGRI R+LK + RVG+ + AGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K Sbjct: 18 AKSSTSHSARAGLQFPVGRIKRYLKRTAQNKIRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLI-KATIAYGGVLPHINKALLLK 125
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2AZ_GIBZE (Histone H2A.Z OS=Gibberella zeae GN=HTZ1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.016e-16 Identity = 55/113 (48.67%), Postives = 65/113 (57.52%), Query Frame = -1 Query: 205 KSVSRSHKAGLQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 540 K S S +AGLQFP GR+ RFLK + RVGA A AGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL K K K Sbjct: 27 KQQSHSARAGLQFPCGRVKRFLKQNTQQKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAYGGVLPHINRALLLKVEQKKK 138
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2AZ_ASHGO (Histone H2A.Z OS=Ashbya gossypii GN=HTZ1 PE=3 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 2.016e-16 Identity = 55/108 (50.93%), Postives = 67/108 (62.04%), Query Frame = -1 Query: 223 SVSRSHKAGLQFPVGRIARFLK---AGKYAERVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 537 S S S +AGLQFPVGRI R+LK AGK RVG+ A AGNAA+D K RI PRH+QLA+R D+EL L+ TIA+GGVLP+I++ LL K Sbjct: 22 SQSHSARAGLQFPVGRIKRYLKKNAAGK--TRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLI-RATIASGGVLPHINKALLLK 126
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2AZ_YARLI (Histone H2A.Z OS=Yarrowia lipolytica GN=HTZ1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.439e-16 Identity = 56/115 (48.70%), Postives = 68/115 (59.13%), Query Frame = -1 Query: 223 KASKSV-----SRSHKAGLQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 549 KAS +V S S +AGLQFPVGRI R++K + RVGA A AGNAARD K RI PRH+QLA+R DEEL L+ TIA GGV+P+I++ LL K Sbjct: 20 KASAAVEGAQQSHSSRAGLQFPVGRIKRYMKKSVQNKVRVGAKAAIYIAAVLEYLTAEVLELAGNAARDLKVKRITPRHLQLAIRGDEELDTLI-QATIAYGGVMPHINKALLLK 133
BLAST of CF835677 vs. ExPASy Swiss-Prot
Match: H2AZ_SCHPO (Histone H2A.Z OS=Schizosaccharomyces pombe GN=pht1 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.439e-16 Identity = 52/103 (50.49%), Postives = 63/103 (61.17%), Query Frame = -1 Query: 229 VSRSHKAGLQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL 534 +S S +AGLQFPVGR+ RFLKA RVGA + AGNAA+D K RI PRH+QLA+R DEEL L+ TIA GGVLP+I++ LL Sbjct: 25 MSHSARAGLQFPVGRVRRFLKAKTQNNMRVGAKSAVYSAAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAGGGVLPHINKQLL 126 The following BLAST results are available for this feature:
BLAST of CF835677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835677 ID=CF835677; Name=CF835677; organism=Citrus sinensis; type=EST; length=651bpback to top |