CF835685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835685 vs. ExPASy Swiss-Prot
Match: RL15E_METTH (50S ribosomal protein L15e OS=Methanobacterium thermoautotrophicum GN=rpl15e PE=3 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 75/182 (41.21%), Postives = 101/182 (55.49%), Query Frame = 1 Query: 61 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKAR 606 Y +V + W+ + +R L R ++R+ P I R+ RPTR D+AR LGY+AK +PT GV ++ +S + +AEER RK + VLNSYW+ ED YK++EVILVDP H AI+NDP+I W+C H+ R RGL S GKK RGLR +G K R Sbjct: 3 YRYVKDAWKNPKDSYVRELMWERAPKWRRDPVIKRIERPTRIDRARALGYRAKPGYIVVRTRVRRGSQRKTRFK--AGRRPTRMGVKKITTAKSIKRIAEERVARKYPNMEVLNSYWVWEDGKYKFYEVILVDPNHLAIKNDPKIYWICVKQHRGRVFRGLISEGKKNRGLRNRGKGAEKVR 182
BLAST of CF835685 vs. ExPASy Swiss-Prot
Match: RL15E_NATPD (50S ribosomal protein L15e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl15e PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.556e-32 Identity = 78/191 (40.84%), Postives = 108/191 (56.54%), Query Frame = 1 Query: 61 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 633 Y+ + E W+ + + LQ R E+R +I R+ RPTR DKAR LGYKAKQ K QGV ++ +++ + +AEER+GRK LRVLNSYW+ ED + K+FEVIL+DP H AI+ND ++W+C+ + R RG TSAG++ RG + +G RPS RA KR Sbjct: 6 YSHIREAWKTPKEGKLAELQWQRQQEWRDQGAIERIERPTRLDKARSLGYKAKQGVVVARVSVRKGTARKQRFKAGRRSK--RQGVNKITRRKNLQRIAEERSGRKFRNLRVLNSYWVGEDGSQKWFEVILLDPEHGAIQNDDDLSWICDDSQRGRAYRGRTSAGQRGRGQQKRGKGTEHTRPSIRANDKR 194
BLAST of CF835685 vs. ExPASy Swiss-Prot
Match: RL15E_HALWD (50S ribosomal protein L15e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl15e PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.556e-32 Identity = 77/184 (41.85%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 61 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPS 612 Y+ + E W++ + LQ R E+R +IVR+ RPTR DKAR LGYKAKQ K QGV +L + S + +AEERA RK LR L SYW+ ED + K+ E+IL+DP H AI ND +NW+C+ HK R RGLT+AG+ RGL+ +G RPS Sbjct: 6 YSHIKEAWKQPGDGKLAELQWQRKQEWRDQGAIVRIDRPTRLDKARELGYKAKQGVIIARVAVRKGGARKKRFTSGRRSK--RQGVNRLGRRTSIQRIAEERAARKYPNLRTLASYWVGEDGSQKWHEIILIDPEHAAIENDDDLNWICDDTHKGRAFRGLTNAGRSNRGLQNRGKGAEHTRPS 187
BLAST of CF835685 vs. ExPASy Swiss-Prot
Match: RL15E_HALLT (50S ribosomal protein L15e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl15e PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.556e-32 Identity = 81/184 (44.02%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 61 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPS 612 Y+ + E WR + + LQ R E+R +I R+ RPTR DKAR LGYKAKQ K QGV +L ++S + ++EERA RK LRVLNSYW+ ED + K+ EVILVDP H AI ND + W+ + HK R RGLTSAG K RG R +G K RPS Sbjct: 6 YSHIKEAWRSPKEGKLAELQWQRKQEWRDEGAIERIERPTRLDKARELGYKAKQGVVVARVSVRKGGSRKQRHKAGRRSK--RQGVNRLSRRKSIQRISEERASRKYRNLRVLNSYWVGEDGSQKWHEVILVDPNHPAIENDGDLGWIASDDHKGRAFRGLTSAGTKGRGQRTRGTGTEKTRPS 187
BLAST of CF835685 vs. ExPASy Swiss-Prot
Match: RL15E_METST (50S ribosomal protein L15e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl15e PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.654e-32 Identity = 76/183 (41.53%), Postives = 103/183 (56.28%), Query Frame = 1 Query: 61 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKAR 606 Y ++ E W+ ++ L R R ++R+ P I+R+ +PTR D+ARRLGYKAK G+ P GV ++ ++S + +AEER RK L VLNSYW+ ED KY+EVILVDP +I++D +INW+C+ H R RGLTSAGKK RGL KG K R Sbjct: 7 YKYMKEAWKNPDESYVKELMRERLPKWRRQPVIIRIDKPTRIDRARRLGYKAKTGYVVARIRVRRGSRRKSRFKN---GRDPKRMGVNKISGEKSIQRMAEERVARKYPNLEVLNSYWVWEDGKAKYYEVILVDPQCPSIQHDNKINWICSKKHTRRAFRGLTSAGKKGRGLNKKGKGAEKVR 186
BLAST of CF835685 vs. ExPASy Swiss-Prot
Match: RL15E_METHJ (50S ribosomal protein L15e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl15e PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.912e-32 Identity = 81/192 (42.19%), Postives = 106/192 (55.21%), Query Frame = 1 Query: 61 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPT-NQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 633 Y +V + W+ ++ L R ++R+ SIVRV RPTR D+AR LGYKAKQ V G+ T GV + +S + +AEERA RK + VLNSYW+ ED K++EVIL+DP H +I ND +NW+ P H+ R RGLTSAG K RG+R +G K RPS RA R Sbjct: 6 YAYVRDAWKIPDDTGVKALLWERMQDWRREGSIVRVRRPTRIDRARALGYKAKQGIVVVRVKVRRGGRRASRY---VRGRRTARMGVNRKTMGKSIQRIAEERACRKYPNMEVLNSYWVGEDGRQKWYEVILLDPHHPSIINDKTLNWISKPGHRGRSERGLTSAGVKGRGMRRRGKGTEKCRPSVRANANR 194
BLAST of CF835685 vs. ExPASy Swiss-Prot
Match: RL15E_METBU (50S ribosomal protein L15e OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl15e PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.720e-31 Identity = 73/193 (37.82%), Postives = 106/193 (54.92%), Query Frame = 1 Query: 61 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRN 636 Y ++ + W+ +R L+ R +R+ S+ RV RPTR D+AR LGYKAKQ + G+ T G ++ +S + ++EERA RK + VLNSYW+ ED K++EVILVDP+H I++D +NW+C H R RG TSAG+K RG++ +G K RPS R+ R+ Sbjct: 6 YGYIRDAWKNPDETYVRDLRWERLQVWRKEGSVTRVERPTRIDRARSLGYKAKQGIVVARVKVRRGSMRKSRY---IRGRRTQHTGKNKITVGKSIQRISEERAARKYPNMEVLNSYWVGEDGKQKWYEVILVDPSHPVIKSDKNLNWICGKAHSGRVFRGKTSAGRKGRGMQTRGTGTEKTRPSVRSNLNRS 195
BLAST of CF835685 vs. ExPASy Swiss-Prot
Match: RL15E_META3 (50S ribosomal protein L15e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl15e PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.934e-31 Identity = 77/193 (39.90%), Postives = 102/193 (52.85%), Query Frame = 1 Query: 52 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWK 630 M Y V E W+K ++ LQ R ++R+ P++VRV +PTR D+AR LGYKAKQ KP + ++ +S + +AEERA ++ L VLNSY + ED K++EVIL+D H +I+ND LC H +R RGLTSAGKK RGL KG K RP RA K Sbjct: 1 MSMYKHVKEAWKKPSESYVKGLQWARMQDWRKEPTVVRVEKPTRIDRARSLGYKAKQGVIVARVAVRRGGLRKPRPKHSK--KPATMAMNKITMSKSIQRIAEERAAKRYPNLEVLNSYSVGEDGKRKWYEVILIDVNHPSIKNDSSYKNLCTGKHTNRVFRGLTSAGKKGRGLMNKGKGAEKVRPGIRANKK 191
BLAST of CF835685 vs. ExPASy Swiss-Prot
Match: RL15E_METMJ (50S ribosomal protein L15e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.902e-30 Identity = 76/187 (40.64%), Postives = 101/187 (54.01%), Query Frame = 1 Query: 61 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 621 Y +V E W++ ++ L R +R+ SIVRV PTR D+AR LGYKAKQ + G+ +L +S + +AEERA RK + LNSYW+ ED K+FEVILVD H +I++D + WL NPVH+ R RG TSAG K RG+R +G K RPS R+ Sbjct: 6 YAYVREAWKRPDRSEVKALLWERLQTWRREGSIVRVEHPTRIDRARSLGYKAKQGIVVVRVKIRRGGRRKPRYTR--GRRSARMGMRRLTPAKSLQRMAEERASRKFPNMEALNSYWVGEDGRSKWFEVILVDGHHPSIKSDRNLAWLANPVHRGRAERGKTSAGMKGRGMRTRGRGTEKTRPSIRS 190
BLAST of CF835685 vs. ExPASy Swiss-Prot
Match: RL15E_ARCFU (50S ribosomal protein L15e OS=Archaeoglobus fulgidus GN=rpl15e PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.902e-30 Identity = 75/191 (39.27%), Postives = 108/191 (56.54%), Query Frame = 1 Query: 61 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 633 Y ++ E W++ + L R ++R+ P++VR+ RPTR D+AR LGYKAK+ K V + +++ + +AEERA RK + VLNSYW+ ED YK+FEVILVD H AI++DP+++W+ + R RGLTSAG+K RGLR KG K RPS RA +++ Sbjct: 5 YAYIREAWKRPYEGYVGELMWHRLQKWRREPAVVRIPRPTRLDRARALGYKAKKGIIVVRVRIRRGGRRATRPNK--GRKSKGLMVNRRTPKKNLQWIAEERANRKYPNMEVLNSYWVGEDGRYKWFEVILVDRDHPAIKSDPQLSWVSRT--RGRVYRGLTSAGRKARGLRRKGRGAEKVRPSLRANFRK 191 The following BLAST results are available for this feature:
BLAST of CF835685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835685 ID=CF835685; Name=CF835685; organism=Citrus sinensis; type=EST; length=763bpback to top |