CF835690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: SEC13_MAGGR (Protein transport protein SEC13 OS=Magnaporthe grisea GN=SEC13 PE=3 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 7.482e-32 Identity = 63/120 (52.50%), Postives = 82/120 (68.33%), Query Frame = 3 Query: 219 EDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISV 578 ++ HD +D+YG+RLAT SSD +IKI + + TLKGH G VW VAWAHPK+G+ILAS YDG+V IW+E W + F HK+SVN ++W+PHE G LAC SSDG++SV Sbjct: 6 KERAHDAVLDYYGRRLATCSSDRTIKIFEVEGETHRLTETLKGHEGAVWCVAWAHPKYGNILASSGYDGKVFIWRE-QGGAWQKIFDFALHKASVNIVSWSPHESGCLLACASSDGHVSV 124
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: SEH1_MOUSE (Nucleoporin SEH1 OS=Mus musculus GN=Seh1l PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.460e-27 Identity = 61/141 (43.26%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 195 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 587 A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S S H A+ K H G VW+V WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP +GL LA S+DG + V+ A Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVYEA 144
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: SEH1_PONAB (Nucleoporin SEH1 OS=Pongo abelii GN=SEH1L PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.907e-27 Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 195 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 587 A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S S H A+ K H G VW+V WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP +GL LA S+DG + ++ A Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEA 144
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: SEH1_HUMAN (Nucleoporin SEH1 OS=Homo sapiens GN=SEH1L PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 1.907e-27 Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 195 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 587 A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S S H A+ K H G VW+V WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP +GL LA S+DG + ++ A Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEA 144
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: SEH1_BOVIN (Nucleoporin SEH1 OS=Bos taurus GN=SEH1L PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.907e-27 Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 195 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 587 A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S S H A+ K H G VW+V WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP +GL LA S+DG + ++ A Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEA 144
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: SEH1B_XENLA (Nucleoporin seh1-B OS=Xenopus laevis GN=seh1l-B PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.253e-27 Identity = 59/141 (41.84%), Postives = 87/141 (61.70%), Query Frame = 3 Query: 195 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 587 A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S + + H A+ K H G VW+V WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP +GL LA S+DG + ++ A Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENVNWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEA 144
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: SEH1A_XENLA (Nucleoporin seh1-A OS=Xenopus laevis GN=seh1l-A PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.253e-27 Identity = 59/141 (41.84%), Postives = 87/141 (61.70%), Query Frame = 3 Query: 195 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 587 A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S + + H A+ K H G VW+V WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP +GL LA S+DG + ++ A Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGNWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEA 144
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: SEH1_XENTR (Nucleoporin seh1 OS=Xenopus tropicalis GN=seh1l PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.248e-27 Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 195 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 587 A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S + H A+ K H G VW+V WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP +GL LA S+DG + ++ A Sbjct: 4 ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEA 144
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: SEH1_DANRE (Nucleoporin seh1 OS=Danio rerio GN=seh1l PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 6.135e-26 Identity = 57/141 (40.43%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 195 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 587 A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ + H A+ K H G VW+V WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP +GL L S+DG + ++ A Sbjct: 4 AKSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKGDDGEWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEA 144
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: SEH1_OSMMO (Nucleoporin seh1 OS=Osmerus mordax GN=seh1l PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25 Identity = 57/141 (40.43%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 195 AQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE--GNQND-------WTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA 587 A+ I H+D +HDV+ DF+G+R+AT SSD S+K+ S++ + A+ K H G VW+V WAHP+FG +LASCS+D +W+E G ND W + T D ++SV + +AP +GL L S+DG + ++ A Sbjct: 4 ARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSDNGEWNCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEA 144 The following BLAST results are available for this feature:
BLAST of CF835690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835690 ID=CF835690; Name=CF835690; organism=Citrus sinensis; type=EST; length=648bpback to top |