CF835690

Overview
NameCF835690
Unique NameCF835690
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: CIAO1_DROSE (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila sechellia GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.263e-12
Identity = 45/144 (31.25%), Postives = 69/144 (47.92%), Query Frame = 3
Query:  204 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAH 632
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I +F     D  WD T    +H
Sbjct:   54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKDVLASASYDNTIKMFAEEPIDNDWDCTATLTSH 193          
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: CIAO1_DROME (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila melanogaster GN=Ciao1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.263e-12
Identity = 45/144 (31.25%), Postives = 69/144 (47.92%), Query Frame = 3
Query:  204 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAH 632
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I +F     D  WD T    +H
Sbjct:   54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVW--HPTKDILASASYDNTIKMFAEEPIDNDWDCTATLTSH 193          
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: CIAO1_DROER (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila erecta GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.263e-12
Identity = 44/144 (30.56%), Postives = 69/144 (47.92%), Query Frame = 3
Query:  204 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTA-TADGGWDTTRIDQAH 632
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I ++     D  WD T    +H
Sbjct:   54 LSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVW--HPTKEVLASASYDNTIKMYAEDPVDNDWDCTATLTSH 193          
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: CIAO1_DROYA (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila yakuba GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.956e-12
Identity = 44/144 (30.56%), Postives = 69/144 (47.92%), Query Frame = 3
Query:  204 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFT-ATADGGWDTTRIDQAH 632
            +  GH+ T+ ++     G+ LA+AS D++  I   S+   +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I ++     D  WD T    +H
Sbjct:   54 LSDGHKRTIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVW--HPTKEILASASYDNTIKMYAEEPIDNDWDCTATLTSH 193          
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: CIAO1_DROVI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila virilis GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.956e-12
Identity = 47/144 (32.64%), Postives = 70/144 (48.61%), Query Frame = 3
Query:  204 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAH 632
            +  GH+ T+ +V     G+ LA+AS D++  I     S  +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I +F  +A D  WD T    +H
Sbjct:   54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIW----SKHECTATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVW--HPTKEVLASASYDNTIKMFAESALDSDWDCTATLSSH 189          
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: CIAO1_DROMO (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila mojavensis GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.585e-12
Identity = 46/144 (31.94%), Postives = 70/144 (48.61%), Query Frame = 3
Query:  204 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAH 632
            +  GH+ T+ +V     G+ LA+AS D++  I     S  +  ATL+GH   V  V+W+  + G +LA+CS D  V IW+    +++  A   N H   V  + W  H     LA  S D  I ++  +A D  WD T    +H
Sbjct:   54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIW----SKHECTATLEGHENEVKSVSWS--RSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVW--HPTKEILASASYDNTIKMYAESALDSDWDCTATLSSH 189          
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: CIAO1_DROGR (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila grimshawi GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11
Identity = 46/144 (31.94%), Postives = 70/144 (48.61%), Query Frame = 3
Query:  204 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATA-DGGWDTTRIDQAH 632
            +  GH+ T+ +V     G+ LA+AS D++  I     S  +  ATL+GH   V  V+W+    G +LA+CS D  V IW+    +++  A   N H   V  + W P +    LA  S D  I ++  +A D  WD T    +H
Sbjct:   54 LSDGHKRTIREVRWSPCGEYLASASFDATTAIW----SKHECNATLEGHENEVKSVSWSQS--GGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSK--EILASASYDNTIKMYAESALDSDWDCTATLSSH 189          
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: CIAO1_DANRE (Probable cytosolic iron-sulfur protein assembly protein ciao1 OS=Danio rerio GN=ciao1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11
Identity = 48/144 (33.33%), Postives = 69/144 (47.92%), Query Frame = 3
Query:  204 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAP-HELGLSLACGSSDGNISVFTATADGGWDTTRIDQAH 632
            +  GH+ TV  VA    GK LA+AS D++  I   ++   + L  L+GH   V  VAWA    GS+LA+CS D  V IW+   ++++      N H   V  + W P  EL   LA  S D  I ++    D  W+     + H
Sbjct:   56 LSDGHQRTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHENEVKCVAWA--PSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQEL---LASASYDNKICIY-KEEDDDWECRATLEGH 193          
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: CIAO1_DICDI (Probable cytosolic iron-sulfur protein assembly protein OS=Dictyostelium discoideum GN=ciao1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11
Identity = 45/134 (33.58%), Postives = 65/134 (48.51%), Query Frame = 3
Query:  213 GHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQ--HLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWD 608
            GHE TV  VA    G+ LA AS D+S  I   S    +  H+++L+GH   V  VAW     G++LA+CS D  + IW+  + ND+      + H   +  + W P+E    L   SS  +   F    DG W+
Sbjct:   67 GHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAW--DSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNE---ELLASSSYDDTIKFWKDIDGDWE 195          
BLAST of CF835690 vs. ExPASy Swiss-Prot
Match: CIO1A_SALSA (Probable cytosolic iron-sulfur protein assembly protein ciao1-A OS=Salmo salar GN=ciao1a PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.508e-11
Identity = 49/136 (36.03%), Postives = 70/136 (51.47%), Query Frame = 3
Query:  213 GHEDTVHDVAMDFYGKRLATASSDSSIKII------GLSNSASQHLATLKGHRG-PVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQ------AHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVF 581
            GH  TV  +  D  G+RLA+ S D ++KI       G  ++A + + TL G  G  V+ +AW  P  G++  +C  DG V ++KE    D  Q      AH    H   VN IAW P E GL ++C S +G I+V+
Sbjct:  192 GHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWC-PLTGALATACGDDG-VRVFKEDETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSC-SDNGEIAVW 324          
The following BLAST results are available for this feature:
BLAST of CF835690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
CIAO1_DROSE2.263e-1231.25Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROME2.263e-1231.25Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROER2.263e-1230.56Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROYA2.956e-1230.56Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROVI2.956e-1232.64Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROMO6.585e-1231.94Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROGR1.467e-1131.94Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DANRE1.467e-1133.33Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DICDI5.574e-1133.58Probable cytosolic iron-sulfur protein assembly pr... [more]
CIO1A_SALSA9.508e-1136.03Probable cytosolic iron-sulfur protein assembly pr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01L11_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01L11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835690 ID=CF835690; Name=CF835690; organism=Citrus sinensis; type=EST; length=648bp
TTTTTAGTTCCGATACCACGCAAAAAGCCTAAAAACGTTTATTACTCTCA
GCCGGTGCTACTGGTCGGTCTTCGAATCCGCTCCTCTCTTAAGAAATTTG
GAGCTGAGAACATAAGATAAAAAGGAGCTACGAACTAGTGATCAAGGAGT
TGAAGTTTGAGGGGTAAAATAAAGAAATATAAAGTAAGATGCCTGCACAA
AAAATTGAAACTGGTCATGAAGACACTGTCCATGATGTAGCCATGGATTT
CTATGGAAAACGTTTAGCCACAGCTTCGTCTGACTCCAGCATTAAGATAA
TTGGTTTAAGCAACTCTGCTTCCCAGCACCTTGCTACATTGAAAGGCCAT
AGAGGTCCTGTTTGGCAAGTTGCATGGGCACACCCCAAGTTTGGGTCAAT
CCTTGCTTCCTGTTCCTATGATGGCCAAGTTATTATCTGGAAGGAAGGTA
ATCAAAATGATTGGACACAGGCTCATACTTTTAATGATCATAAATCATCT
GTCAACTCCATTGCGTGGGCACCTCATGAACTTGGTCTCTCCTTGGCTTG
TGGATCTTCTGATGGGAACATCTCAGTCTTTACTGCTACAGCTGATGGTG
GCTGGGATACTACCAGGATAGACCAGGCCCATCCAGTCGGAGTAACAT
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