CF835699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835699 vs. ExPASy Swiss-Prot
Match: RL37A_METM5 (50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.645e-13 Identity = 34/84 (40.48%), Postives = 48/84 (57.14%), Query Frame = 2 Query: 65 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 316 TKK G G++G+RYG +R +++ +E+ Q +Y C C +KR IW C+ CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRAGTSIWVCEKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of CF835699 vs. ExPASy Swiss-Prot
Match: RL37A_METVS (50S ribosomal protein L37Ae OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.218e-13 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 2 Query: 65 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 316 TKK G G++G RYG +R +++ +E+ Q+ +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGPRYGRKIRVRLRDVEIKQNKEYKCPVCAFPKLKRAGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of CF835699 vs. ExPASy Swiss-Prot
Match: RL37A_METM7 (50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.121e-13 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 2 Query: 65 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 316 TKK G G++G+RYG +R +++ +E+ Q +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRVGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of CF835699 vs. ExPASy Swiss-Prot
Match: RL37A_METM6 (50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.121e-13 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 2 Query: 65 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 316 TKK G G++G+RYG +R +++ +E+ Q +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRVGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of CF835699 vs. ExPASy Swiss-Prot
Match: RL37A_THESM (50S ribosomal protein L37Ae OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-12 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 2 Query: 62 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAY 259 RTKK G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY Sbjct: 3 RTKKVGSAGRFGPRYGLKIRRRVAAVEEKMRQKHTCPVCGRKAVRRISTGIWQCQKCGATFAGGAY 68
BLAST of CF835699 vs. ExPASy Swiss-Prot
Match: RL37A_ARCFU (50S ribosomal protein L37Ae OS=Archaeoglobus fulgidus GN=rpl37ae PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.809e-12 Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 2 Query: 62 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTI 301 RTKK G++G RYG +R+ ++E Q KY C+ CGK AVKR GIW C+ CG AGG Y T V ++ Sbjct: 3 RTKKVRSAGRFGPRYGLRVRRTWLEIEAVQRQKYVCKKCGKKAVKRSGTGIWECRHCGYKFAGGCYQPVTPGGKIVEKSV 82
BLAST of CF835699 vs. ExPASy Swiss-Prot
Match: RL37A_THEON (50S ribosomal protein L37Ae OS=Thermococcus onnurineus (strain NA1) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 2 Query: 62 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAY 259 RT K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY Sbjct: 3 RTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGATFAGGAY 68
BLAST of CF835699 vs. ExPASy Swiss-Prot
Match: RL37A_THEGJ (50S ribosomal protein L37Ae OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12 Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 2 Query: 62 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTI 301 RT K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY T + + + Sbjct: 3 RTVKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPTTPAGKVAKRVV 82
BLAST of CF835699 vs. ExPASy Swiss-Prot
Match: RL37A_PYRKO (50S ribosomal protein L37Ae OS=Pyrococcus kodakaraensis GN=rpl37ae PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12 Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 2 Query: 62 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNT-ASAVTVRST 298 RT K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY T A V R T Sbjct: 3 RTTKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPTTPAGKVAKRVT 82
BLAST of CF835699 vs. ExPASy Swiss-Prot
Match: RL37A_METST (50S ribosomal protein L37Ae OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.264e-12 Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = 2 Query: 62 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL 310 + K G G++G RYG ++ +K +E H+K+ C C + VKR GIW C+ CG V GGAY T + I+R+ Sbjct: 3 KKSKVGSTGRFGARYGRKAKRTVKDIEDKMHAKHVCPKCDRPGVKRTHAGIWKCRKCGAVFTGGAYIPTTPMGKVAKRNIKRI 85 The following BLAST results are available for this feature:
BLAST of CF835699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835699 ID=CF835699; Name=CF835699; organism=Citrus sinensis; type=EST; length=580bpback to top |