CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 2.848e-15
Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE+L ++ H ++V L+G C E +   L+Y+Y+ NG L+    H +G   + W  R  I  + A GL +LH      IVHRD
Sbjct:  614 EVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKK---HFSGSSIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRD 692          

HSP 2 Score: 48.521 bits (114), Expect = 2.848e-15
Identity = 18/39 (46.15%), Postives = 32/39 (82.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            T++AGT  Y+D EY++T  +  KSD+Y+FGV++L+++T+
Sbjct:  727 TLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITN 765          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: PUB32_ARATH (U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 2
Query:   83 FPSNLQVEVLSQIRHPHVVLLLGACPEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKP 316
            F    +VE+LS++RHP++V L+GACPE   L+Y+Y+ NGSLED    +N  PAL W  R +I  E+   L FLH++ P
Sbjct:  498 FEFERRVEILSRVRHPNLVTLMGACPESRSLIYQYIPNGSLEDCFSSENNVPALSWESRIRIASEICSALLFLHSNIP 575          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.867e-15
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC---PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++S + H ++V LLG     PE + LVYEYL+N SL+ +I+  N    L W  R+ II   A GL +LH      I+HRD
Sbjct:  369 EVNMISTVEHKNLVRLLGCSCSGPE-SLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRD 450          

HSP 2 Score: 42.3578 bits (98), Expect = 2.867e-15
Identity = 18/38 (47.37%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T +AGTL YM PEY   G +    D+Y+FGV++L+++T
Sbjct:  484 TAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVT 521          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 2.867e-15
Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V +L++++H ++V LLG C E +   LVYE++ N SL+ +I+ +  +  L W VR+ II  VA GL +LH      I+HRD
Sbjct:  389 EVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRD 470          

HSP 2 Score: 39.2762 bits (90), Expect = 2.867e-15
Identity = 16/36 (44.44%), Postives = 25/36 (69.44%), Query Frame = 3
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            + GT  YM PEY   G    KSD+Y+FGV++L++++
Sbjct:  507 VVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMIS 542          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.867e-15
Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V +L++++H ++V LLG C E +   LVYE++ N SL+ +I+ +  +  L W +R +II  VA GL +LH      I+HRD
Sbjct:  383 EVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRD 464          

HSP 2 Score: 42.3578 bits (98), Expect = 2.867e-15
Identity = 17/36 (47.22%), Postives = 26/36 (72.22%), Query Frame = 3
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            + GT  YM PEY R  T   K+D+Y+FGV++L+++T
Sbjct:  501 VVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMIT 536          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 2.871e-15
Identity = 31/82 (37.80%), Postives = 48/82 (58.54%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++S ++H ++V LLG   E   + LVYEY+ N SL+  ++ +N    L W  RF II  ++ GL +LH      I+HRD
Sbjct:  362 EVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRD 443          

HSP 2 Score: 43.8986 bits (102), Expect = 2.871e-15
Identity = 19/38 (50.00%), Postives = 29/38 (76.32%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T +AGTL Y+ PEY   G +  K+D+YAFGV+I++++T
Sbjct:  477 TGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVT 514          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.886e-15
Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 2
Query:   95 LQVEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIY---HQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++VE +  +RH ++V LLG C E     LVYEY+ +G+LE +++    Q+G   L W  R +II   A  LA+LH +    +VHRD
Sbjct:  226 VEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGN--LTWEARMKIITGTAQALAYLHEAIEPKVVHRD 309          

HSP 2 Score: 43.8986 bits (102), Expect = 2.886e-15
Identity = 18/38 (47.37%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T + GT  Y+ PEY  TG +  KSD+Y+FGV++L+ +T
Sbjct:  343 TRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAIT 380          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 2.911e-15
Identity = 33/88 (37.50%), Postives = 46/88 (52.27%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIYHQNGK------PALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            QV ++S+++  +VV LLG C +     L YEY  NGSL D ++ + G       P L W  R +I    A GL +LH      I+HRD
Sbjct:  111 QVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRD 198          

HSP 2 Score: 46.2098 bits (108), Expect = 2.911e-15
Identity = 22/50 (44.00%), Postives = 29/50 (58.00%), Query Frame = 3
Query:  339 DNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            D       T + GT  Y  PEY  TG +  KSD+Y+FGV++L+LLT   P
Sbjct:  225 DMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKP 274          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 3.671e-15
Identity = 37/98 (37.76%), Postives = 53/98 (54.08%), Query Frame = 2
Query:   92 NLQVEVLSQIRHPHVVLLLGACPE----INCLVYEYLENGSLEDYIYHQNG---KPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRD 364
            N +V+ L  IRH H+V L+G C      +N L+YEY+ NGS+ D+++       K  L W  R +I   +A G+ +LH     PIVHRD +   V  D
Sbjct:  991 NREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLD 1088          

HSP 2 Score: 36.965 bits (84), Expect = 3.671e-15
Identity = 14/42 (33.33%), Postives = 28/42 (66.67%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T+ AG+  Y+ PEY  +     KSD+Y+ G+++++++T  +P
Sbjct: 1116 TMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMP 1157          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 3.703e-15
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++++++H ++V +LG C E +   L+YEYLEN SL+ Y++ +  +  L W  RF I   VA GL +LH      I+HRD
Sbjct:  572 EVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRD 653          

HSP 2 Score: 40.817 bits (94), Expect = 3.703e-15
Identity = 18/43 (41.86%), Postives = 27/43 (62.79%), Query Frame = 3
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            TE     + GT  YM PEY   G    KSD+++FGVI+L++++
Sbjct:  683 TEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVS 725          
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
Y1756_ARATH2.848e-1536.59Probable LRR receptor-like serine/threonine-protei... [more]
PUB32_ARATH2.864e-1547.44U-box domain-containing protein 32 OS=Arabidopsis ... [more]
CRK2_ARATH2.867e-1540.96Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
CRK37_ARATH2.867e-1540.24Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK38_ARATH2.867e-1539.02Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK1_ARATH2.871e-1537.80Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
Y2296_ARATH2.886e-1539.53Probable receptor-like protein kinase At2g42960 OS... [more]
PTI1_SOLLC2.911e-1537.50Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
GSO2_ARATH3.671e-1537.76LRR receptor-like serine/threonine-protein kinase ... [more]
SRK6_BRAOE3.703e-1539.02Putative serine/threonine-protein kinase receptor ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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