CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 4.792e-15
Identity = 33/84 (39.29%), Postives = 48/84 (57.14%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIY--HQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++ ++S ++HP++V L G C E N   LVYEYLEN  L   ++   ++ +  L W  R +I   +A GL FLH      IVHRD
Sbjct:  722 EIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRD 805          

HSP 2 Score: 42.3578 bits (98), Expect = 4.792e-15
Identity = 18/46 (39.13%), Postives = 31/46 (67.39%), Query Frame = 3
Query:  339 DNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            D+   +  T +AGT+ YM PEY   G +  K+D+Y+FGV+ L++++
Sbjct:  831 DDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVS 876          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 4.834e-15
Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIY---HQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E L ++RH ++V L G C + N   L+Y+Y+ NGSL+  +Y    Q+G   L W  RF+I   +A GL +LH    K ++HRD
Sbjct:  407 EIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGV-VLSWNARFKIAKGIASGLLYLHEEWEKVVIHRD 490          

HSP 2 Score: 40.817 bits (94), Expect = 4.834e-15
Identity = 17/42 (40.48%), Postives = 28/42 (66.67%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T++ GT+ YM PE  R G     SD++AFGV++L++++   P
Sbjct:  524 TVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRP 565          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 6.362e-15
Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN------CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRD 364
            +V+ L  + HP+VV L+G C E         LVYEY+ N SLED+++ +     LPW  R +I+   A GL +LH+ K   +++RD +   V  D
Sbjct:  137 EVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSH-TLPWKKRLEIMLGAAEGLTYLHDLK---VIYRDFKSSNVLLD 227          

HSP 2 Score: 41.9726 bits (97), Expect = 6.362e-15
Identity = 18/38 (47.37%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T   GT  Y  PEY +TG +R KSD+Y+FGV++ +++T
Sbjct:  253 TARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIIT 290          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.160e-15
Identity = 31/84 (36.90%), Postives = 49/84 (58.33%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPA--LPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E L ++RH ++V L G C   N   L+Y+Y+ NGSL+  +Y +  +    L W  RFQI   +A GL +LH    + ++HRD
Sbjct:  408 EIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRD 491          

HSP 2 Score: 41.2022 bits (95), Expect = 8.160e-15
Identity = 17/42 (40.48%), Postives = 28/42 (66.67%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T++ GT+ YM PE  R G     SD++AFGV++L++++   P
Sbjct:  525 TVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKP 566          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 8.162e-15
Identity = 32/84 (38.10%), Postives = 48/84 (57.14%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYH--QNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E L ++RH ++V L G C   N   L+Y+Y+ NGSL+  +Y   +     L W  RFQI   +A GL +LH    K ++HRD
Sbjct:  411 EIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRD 494          

HSP 2 Score: 40.0466 bits (92), Expect = 8.162e-15
Identity = 18/42 (42.86%), Postives = 26/42 (61.90%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T L GT+ YM PE  R G     SD++AFGV++L+++    P
Sbjct:  528 TALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKP 569          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 8.163e-15
Identity = 29/82 (35.37%), Postives = 52/82 (63.41%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++ +L++++H ++V L+G C   E   LVYE+++N SL+ +I+    +  L W VR+++I  +A GL +LH      I+HRD
Sbjct:  401 EILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRD 482          

HSP 2 Score: 39.6614 bits (91), Expect = 8.163e-15
Identity = 15/36 (41.67%), Postives = 26/36 (72.22%), Query Frame = 3
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            +AGT  YM PEY   G    K+D+++FGV++++++T
Sbjct:  521 IAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIIT 556          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 8.169e-15
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V V++ +RH ++V +LG     E   LVYEY+EN SL+++++    K  L W  R+ II  +A G+ +LH      I+HRD
Sbjct:  380 EVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLFDPAKKGQLYWTQRYHIIGGIARGILYLHQDSRLTIIHRD 461          

HSP 2 Score: 42.3578 bits (98), Expect = 8.169e-15
Identity = 17/43 (39.53%), Postives = 28/43 (65.12%), Query Frame = 3
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T+   + + GT  YM PEY   G    KSD+Y+FGV++L++++
Sbjct:  491 TQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIIS 533          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.047e-14
Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACP--EINCLVYEYLENGSLEDYIYHQNGKPA--LPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDHS 370
            ++E + +I+H ++V LLG C   E   LVYEY++ GSLED + H   K    L W  R +I    A GLAFLH++    I+HRD +   V  D +
Sbjct:  932 EMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLED-VLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDEN 1025          

HSP 2 Score: 41.9726 bits (97), Expect = 1.047e-14
Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = 3
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T    + LAGT  Y+ PEY+++     K D+Y++GV++L+LLT   P
Sbjct: 1044 THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQP 1090          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.048e-14
Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACP--EINCLVYEYLENGSLEDYIYHQNGKPA---LPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRD 364
            ++E + +I+H ++V LLG C   E   LVYEY++ GSLE  ++ ++ K     L W  R +I    A GLAFLH+S    I+HRD +   V  D
Sbjct:  903 EMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLD 996          

HSP 2 Score: 40.817 bits (94), Expect = 1.048e-14
Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = 3
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T    + LAGT  Y+ PEY+++     K D+Y++GVI+L+LL+   P
Sbjct: 1017 THLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKP 1063          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.048e-14
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACP--EINCLVYEYLENGSLEDYIYHQNGKPA--LPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRD 364
            ++E + +I+H ++V LLG C   E   LVYEY++ GSLE  ++ +  K    L W  R +I    A GLAFLH+S    I+HRD +   V  D
Sbjct:  902 EMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLD 994          

HSP 2 Score: 40.817 bits (94), Expect = 1.048e-14
Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = 3
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T    + LAGT  Y+ PEY+++     K D+Y++GVI+L+LL+   P
Sbjct: 1015 THLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKP 1061          
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
Y1765_ARATH4.792e-1539.29Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH4.834e-1538.82Lectin-domain containing receptor kinase A4.2 OS=A... [more]
Y5707_ARATH6.362e-1536.84Probable receptor-like protein kinase At5g47070 OS... [more]
LRKA3_ARATH8.160e-1536.90Lectin-domain containing receptor kinase A4.3 OS=A... [more]
LRKA1_ARATH8.162e-1538.10Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CRK29_ARATH8.163e-1535.37Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
CRK7_ARATH8.169e-1537.80Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
BRI1_SOLPE1.047e-1440.00Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRL1_ARATH1.048e-1439.36Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BRL3_ARATH1.048e-1439.78Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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