CF835710 | Citrus Genome Database

Overview


Name	CF835710
Unique Name	CF835710
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	751

Libraries


Library Name	Type
Washington Navel Orange Shoot Meristem cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 1.076e-14
Identity = 31/83 (37.35%), Postives = 52/83 (62.65%), Query Frame = 2

Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNG-KPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++  L Q+ HP++V L+G C   E   LVYE++  GSLE++++ +      L W  R ++    A GLAFLHN++P+ +++RD
Sbjct:  122 EINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQ-VIYRD 203

HSP 2 Score: 41.5874 bits (96), Expect = 1.076e-14
Identity = 19/38 (50.00%), Postives = 27/38 (71.05%), Query Frame = 3

Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T + GT  Y  PEY  TG +  KSD+Y+FGV++L+LL+
Sbjct:  238 TRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLS 275

[Close]

BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.365e-14
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 2

Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQ-NGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE LS+  H ++V L G C   N   L+Y ++ENGSL+ +++ + +G   L W VR +I    A GLA+LH      ++HRD
Sbjct:  798 EVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRD 880

HSP 2 Score: 42.743 bits (99), Expect = 1.365e-14
Identity = 29/92 (31.52%), Postives = 49/92 (53.26%), Query Frame = 3

Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNGVLLILIPKSCRFSGNSRMLQMLV*SWKAAMFMHQATSSVQSLLLMDLL 638
            T L GTL Y+ PEY ++     + D+Y+FGV++L+L+T   P   + +   KSCR    SR+ QM     +A +       +V    ++++L
Sbjct:  914 TDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRP---VEVCKGKSCR-DLVSRVFQMKAEKREAELIDTTIRENVNERTVLEML 1001

[Close]

BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 1.379e-14
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 2

Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++++++H ++V LLG C   E   LVYEY+ N SL+ +++    K  L W  R++II  VA G+ +LH      I+HRD
Sbjct:  381 EVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRD 462

HSP 2 Score: 42.3578 bits (98), Expect = 1.379e-14
Identity = 18/43 (41.86%), Postives = 28/43 (65.12%), Query Frame = 3

Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            TE   + + GT  YM PEY   G    KSD+Y+FGV++L++++
Sbjct:  492 TEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIIS 534

[Close]

BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.767e-14
Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 2

Query:   98 QVEVLSQIRHPHVVLLLGACP--EINCLVYEYLENGSLEDYIYHQNGKPA--LPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDHS 370
            ++E + +I+H ++V LLG C   E   LVYEY++ GSLED + H   K    L W  R +I    A GLAFLH++    I+HRD +   V  D +
Sbjct:  932 EMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLED-VLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDEN 1025

HSP 2 Score: 41.9726 bits (97), Expect = 1.767e-14
Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = 3

Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T    + LAGT  Y+ PEY+++     K D+Y++GV++L+LLT   P
Sbjct: 1044 THLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQP 1090

[Close]

BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.771e-14
Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 2

Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQN--GKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VEVLS+ +H ++V L G C       L+Y ++ENGSL DY  H+N  G   L W  R  I+   + GLA++H      IVHRD
Sbjct:  847 EVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSL-DYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRD 929

HSP 2 Score: 41.2022 bits (95), Expect = 1.771e-14
Identity = 19/42 (45.24%), Postives = 27/42 (64.29%), Query Frame = 3

Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T L GTL Y+ PEY +      + D+Y+FGV++L+LLT   P
Sbjct:  963 TELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRP 1004

[Close]

BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.773e-14
Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 2

Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYH-QNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++ ++S ++HP++V L G C E     LVYEYLEN SL   ++  +  +  L W  R +I   +A GLA+LH      IVHRD
Sbjct:  713 EIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRD 795

HSP 2 Score: 42.743 bits (99), Expect = 1.773e-14
Identity = 18/46 (39.13%), Postives = 31/46 (67.39%), Query Frame = 3

Query:  339 DNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            D+   +  T +AGT+ YM PEY   G +  K+D+Y+FGV+ L++++
Sbjct:  821 DDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVS 866

[Close]

BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.792e-14
Identity = 29/82 (35.37%), Postives = 50/82 (60.98%), Query Frame = 2

Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V V+++++H ++V LLG C   E   LVYE++ N SL+ +++    +  L W  R++II  +A G+ +LH      I+HRD
Sbjct:  384 EVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRD 465

HSP 2 Score: 41.5874 bits (96), Expect = 1.792e-14
Identity = 18/43 (41.86%), Postives = 27/43 (62.79%), Query Frame = 3

Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            TE     + GT  YM PEY   G    KSD+Y+FGV++L++++
Sbjct:  495 TEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIIS 537

[Close]

BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 1.793e-14
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 2

Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V V+++++H ++V LLG C   E   LVYE++ N SL+ +++    K  L W  R++II  +A G+ +LH      I+HRD
Sbjct:  370 EVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRD 451

HSP 2 Score: 41.2022 bits (95), Expect = 1.793e-14
Identity = 18/43 (41.86%), Postives = 27/43 (62.79%), Query Frame = 3

Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            TE     + GT  YM PEY   G    KSD+Y+FGV++L++++
Sbjct:  481 TEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIIS 523

[Close]

BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 56.9954 bits (136), Expect = 2.303e-14
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 2

Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++  +S ++H ++V L G C   E   LVYEYL NGSL+  ++ +     L W  R++I   VA GL +LH      IVHRD
Sbjct:  737 EIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLH-LDWSTRYEICLGVARGLVYLHEEARLRIVHRD 817

HSP 2 Score: 42.743 bits (99), Expect = 2.303e-14
Identity = 19/46 (41.30%), Postives = 31/46 (67.39%), Query Frame = 3

Query:  339 DNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            D+   +  T +AGT+ Y+ PEY   G +  K+D+YAFGV+ L+L++
Sbjct:  843 DDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVS 888

[Close]

BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.304e-14
Identity = 33/83 (39.76%), Postives = 46/83 (55.42%), Query Frame = 2

Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPA-LPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++  +S ++HP++V L G C E     L YEY+EN SL   ++    K   + W  RF+I   +A GLAFLH   P   VHRD
Sbjct:  725 EIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRD 807

HSP 2 Score: 40.4318 bits (93), Expect = 2.304e-14
Identity = 17/37 (45.95%), Postives = 28/37 (75.68%), Query Frame = 3

Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            T +AGT+ YM PEY   G +  K+D+Y+FGV++L+++
Sbjct:  841 TKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIV 877

The following BLAST results are available for this feature:

BLAST of CF835710 vs. ExPASy Swiss-Prot

BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199


Match Name	E-value	Identity	Description
NAK_ARATH	1.076e-14	37.35	Probable serine/threonine-protein kinase NAK OS=Ar...	[more]
PSKR2_ARATH	1.365e-14	38.55	Phytosulfokine receptor 2 OS=Arabidopsis thaliana ...	[more]
CRK10_ARATH	1.379e-14	37.80	Cysteine-rich receptor-like protein kinase 10 OS=A...	[more]
BRI1_SOLLC	1.767e-14	40.00	Brassinosteroid LRR receptor kinase OS=Solanum lyc...	[more]
PSYR1_ARATH	1.771e-14	41.67	Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi...	[more]
Y5343_ARATH	1.773e-14	39.76	Probable LRR receptor-like serine/threonine-protei...	[more]
CRK5_ARATH	1.792e-14	35.37	Cysteine-rich receptor-like protein kinase 5 OS=Ar...	[more]
CRK19_ARATH	1.793e-14	36.59	Cysteine-rich receptor-like protein kinase 19 OS=A...	[more]
Y5614_ARATH	2.303e-14	39.02	Probable LRR receptor-like serine/threonine-protei...	[more]
RKF1_ARATH	2.304e-14	39.76	Probable LRR receptor-like serine/threonine-protei...	[more]

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Properties


Property Name	Value
Genbank description	UCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T