CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 6.880e-13
Identity = 31/95 (32.63%), Postives = 49/95 (51.58%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGAC----PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDHS 370
            ++  L +IRH ++V L   C       N L+YEY+  GSL + + H     ++ W  RF I    A GLA+LH+     I+HRD + + +  D +
Sbjct:  870 EILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELL-HGGKSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDEN 963

HSP 2 Score: 41.2022 bits (95), Expect = 6.880e-13
Identity = 18/40 (45.00%), Postives = 27/40 (67.50%), Query Frame = 3 
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            +AG+  Y+ PEY  T  +  K D+Y+FGV++L+LLT   P
Sbjct:  988 VAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAP 1027
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 6.957e-13
Identity = 35/92 (38.04%), Postives = 49/92 (53.26%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQ-NGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRD 364
            +V+ LS+ RHP++V   G C +    CLVY +L NGSLED ++ Q    P L W  R  I+   A  + FLH   P  ++H D +   V  D
Sbjct:  259 EVQQLSRFRHPNIVDFAGYCAQSGFYCLVYGFLPNGSLEDRLHVQTQAWPPLSWPQRLDILLGTARAIQFLHQDSPS-LIHGDVKSSNVLLD 349

HSP 2 Score: 35.8094 bits (81), Expect = 6.957e-13
Identity = 15/39 (38.46%), Postives = 25/39 (64.10%), Query Frame = 3 
Query:  357 RETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            R   + GTL Y+  EY +TG +   +D ++FGV++L+ L
Sbjct:  380 RTRTVRGTLAYLPEEYVKTGRLAVDTDTFSFGVVLLETL 418
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 54.299 bits (129), Expect = 6.967e-13
Identity = 29/82 (35.37%), Postives = 47/82 (57.32%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V V+++++H ++V LLG     E   LVYEY+ N SL+  ++    +  L W  R+ II  +A G+ +LH      I+HRD
Sbjct:  397 EVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRD 478

HSP 2 Score: 40.4318 bits (93), Expect = 6.967e-13
Identity = 17/43 (39.53%), Postives = 28/43 (65.12%), Query Frame = 3 
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T+   + + GT  YM PEY   G    KSD+Y+FGV++L++++
Sbjct:  508 TQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIIS 550
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 9.039e-13
Identity = 30/82 (36.59%), Postives = 46/82 (56.10%), Query Frame = 2 
Query:  101 VEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIYHQNGKPA-LPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            V  +S++RHP++V L G C E     LVYEY+ NG+L+D ++  + +   L W  R ++    A  L +LH      IVHR+
Sbjct:  442 VSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRN 523

HSP 2 Score: 41.9726 bits (97), Expect = 9.039e-13
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 3 
Query:  312 SQSLLCIETDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            S S L   T N      T + G+  Y  PE+  +G    KSD+Y FGV++L+LLT   P
Sbjct:  540 SDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKP 598
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 53.5286 bits (127), Expect = 9.045e-13
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V V+++++H ++V LLG     E   LVYE++ N SL+ +++  N +  L W VR  II  +  G+ +LH      I+HRD
Sbjct:  403 EVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRD 484

HSP 2 Score: 40.817 bits (94), Expect = 9.045e-13
Identity = 17/36 (47.22%), Postives = 25/36 (69.44%), Query Frame = 3 
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            + GT  YM PEY   G    KSD+Y+FGV+IL++++
Sbjct:  521 VVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIIS 556
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 9.053e-13
Identity = 28/82 (34.15%), Postives = 47/82 (57.32%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++++++H ++V LLG   E     LVYEY+ N SL+ +++    +  L W  R+ II  V  G+ +LH      I+HRD
Sbjct:  379 EVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRD 460

HSP 2 Score: 41.2022 bits (95), Expect = 9.053e-13
Identity = 19/42 (45.24%), Postives = 26/42 (61.90%), Query Frame = 3 
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            TE     + GT  YM PEY   G    KSD+Y+FGV+IL+++
Sbjct:  490 TEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEII 531
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 51.2174 bits (121), Expect = 9.063e-13
Identity = 27/82 (32.93%), Postives = 47/82 (57.32%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACP--EINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++++++H ++V LLG     +   LVYE+L N SL+ +++    K  L W  R+ II  +  G+ +LH      I+HRD
Sbjct:  356 EVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLDWTRRYNIINGITRGIVYLHQDSRLTIIHRD 437

HSP 2 Score: 43.1282 bits (100), Expect = 9.063e-13
Identity = 19/42 (45.24%), Postives = 27/42 (64.29%), Query Frame = 3 
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            TE     + GT+ YM PEY   G    KSD+Y+FGV+IL+++
Sbjct:  467 TEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEII 508
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 9.142e-13
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +++V+++ +H ++V LLG   + +  CLVY Y+ NGSL D +   +G P L W +R +I    A G+ FLH +     +HRD
Sbjct:  233 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRD 311

HSP 2 Score: 41.5874 bits (96), Expect = 9.142e-13
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 3 
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            + GT  YM PE  R G I PKSD+Y+FGV++L+++T
Sbjct:  348 IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIIT 382
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 9.142e-13
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +++V+++ +H ++V LLG   + +  CLVY Y+ NGSL D +   +G P L W +R +I    A GL++LH +     +HRD
Sbjct:  234 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWNMRCKIAQGAANGLSYLHENHH---IHRD 312

HSP 2 Score: 41.5874 bits (96), Expect = 9.142e-13
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 3 
Query:  369 LAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            + GT  YM PE  R G I PKSD+Y+FGV++L+++T
Sbjct:  349 IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIIT 383
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 1.175e-12
Identity = 29/82 (35.37%), Postives = 47/82 (57.32%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V V+++++H ++V LLG     E   LVYEY+ N SL+  ++    +  L W  R+ II  +A G+ +LH      I+HRD
Sbjct:  395 EVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRD 476

HSP 2 Score: 40.4318 bits (93), Expect = 1.175e-12
Identity = 17/43 (39.53%), Postives = 28/43 (65.12%), Query Frame = 3 
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T+   + + GT  YM PEY   G    KSD+Y+FGV++L++++
Sbjct:  506 TQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIIS 548
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
Y2317_ARATH6.880e-1332.63Probable leucine-rich repeat receptor-like protein... [more]
IRAK1_BOVIN6.957e-1338.04Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]
CRK8_ARATH6.967e-1335.37Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
SRF8_ARATH9.039e-1336.59Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
CRK17_ARATH9.045e-1335.37Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK16_ARATH9.053e-1334.15Putative cysteine-rich receptor-like protein kinas... [more]
CRK24_ARATH9.063e-1332.93Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
IRAK4_HUMAN9.142e-1336.59Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
IRAK4_BOVIN9.142e-1336.59Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
CRK6_ARATH1.175e-1235.37Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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