CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 2.075e-11
Identity = 26/82 (31.71%), Postives = 46/82 (56.10%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++++++H ++V LLG   E     LVYE++ N SL+ +++    +  L W  R  II  +  G+ +LH      I+HRD
Sbjct:  407 EVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRD 488          

HSP 2 Score: 43.1282 bits (100), Expect = 2.075e-11
Identity = 20/44 (45.45%), Postives = 27/44 (61.36%), Query Frame = 3
Query:  342 NITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            N TE     + GT  YM PEY   G    KSD+Y+FGV+IL+++
Sbjct:  516 NQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEII 559          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 2.077e-11
Identity = 29/90 (32.22%), Postives = 48/90 (53.33%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGK--------PALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++++++H ++V LLG C E +   LVYE++ N SL  +++    K          L W  R+ II  +  GL +LH      I+HRD
Sbjct:  365 EVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRD 454          

HSP 2 Score: 40.817 bits (94), Expect = 2.077e-11
Identity = 19/42 (45.24%), Postives = 26/42 (61.90%), Query Frame = 3
Query:  348 TEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            TE     + GT  YM PEY   G    KSD+Y+FGV+IL+++
Sbjct:  484 TEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIV 525          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: YR818_MIMIV (Putative serine/threonine-protein kinase/receptor R818 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R818 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 37/94 (39.36%), Postives = 61/94 (64.89%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC---PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDHS 370
            ++  LSQ+RHPH++L++GAC   P I C+V E++ NGSL + I  +  KP   W ++ +++++ A G+ +LHNS P  I+HRD +   +  D S
Sbjct: 1439 EIAFLSQLRHPHIILMIGACLKRPNI-CIVTEFMGNGSLRNVI--KTTKP--EWKLKIKMLYQTALGIGYLHNSDP-IIIHRDIKPSNILVDDS 1526          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 3.503e-11
Identity = 29/82 (35.37%), Postives = 44/82 (53.66%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E++S   H +++ L+G C   +   LVY Y+ NGS+   +     KPAL W  R +I    A GL +LH      I+HRD
Sbjct:  344 ELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRL---KAKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRD 422          

HSP 2 Score: 38.5058 bits (88), Expect = 3.503e-11
Identity = 15/38 (39.47%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T + GT+ ++ PEY  TG    K+D++ FG+++L+L+T
Sbjct:  456 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 493          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 47.3654 bits (111), Expect = 3.506e-11
Identity = 30/85 (35.29%), Postives = 50/85 (58.82%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGACP--EINCLVYEYLENGSLEDYIY---HQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +++ L  +++ ++V LLG C   +   L+YEY+ NG L D ++    ++ KP L W  R +I    A GLA+LH+S    I+HR+
Sbjct:  346 EMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKP-LDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRN 429          

HSP 2 Score: 41.5874 bits (96), Expect = 3.506e-11
Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 3
Query:  375 GTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            G   Y+ PEY RT    PK D+Y+FGV++L+L+T
Sbjct:  470 GDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVT 503          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 51.2174 bits (121), Expect = 3.509e-11
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQ-NGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE++S   H +++ L G C  P    LVY Y+ NGS+   +  +  G PAL W  R  I    A GLA+LH+   + I+H D
Sbjct:  320 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLD 402          

HSP 2 Score: 37.7354 bits (86), Expect = 3.509e-11
Identity = 15/38 (39.47%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T + GT+ ++ PEY  TG    K+D++ +GV++L+L+T
Sbjct:  436 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 473          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 7.637e-11
Identity = 27/85 (31.76%), Postives = 47/85 (55.29%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNG---KPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V ++++++H ++V LLG     E   LV+E++ N SL+ +++       K  L W  R+ II  +  GL +LH      I+HRD
Sbjct:  390 EVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRD 474          

HSP 2 Score: 41.9726 bits (97), Expect = 7.637e-11
Identity = 20/46 (43.48%), Postives = 29/46 (63.04%), Query Frame = 3
Query:  339 DNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            D+ TE     + GT  YM PEY   G    KSD+Y+FGV+IL++++
Sbjct:  501 DHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVS 546          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 7.638e-11
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = 2
Query:  110 LSQIRHPHVVLLLGACPEI--NCLVYEYLENGSLEDYIYHQN--GKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            LS+IRH ++  L+G C E   N LVYEY  NGSL ++++  +   KP L W  R +I    A  + +LH +    ++H++
Sbjct:  454 LSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLHLSDCFSKP-LTWNTRVRIALGTARAVEYLHEACSPSVMHKN 532          

HSP 2 Score: 36.5798 bits (83), Expect = 7.638e-11
Identity = 16/34 (47.06%), Postives = 22/34 (64.71%), Query Frame = 3
Query:  387 YMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            Y  PE        PKSD+Y+FGV++L+LLT  +P
Sbjct:  568 YNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVP 601          
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 49.6766 bits (117), Expect = 9.950e-11
Identity = 30/83 (36.14%), Postives = 45/83 (54.22%), Query Frame = 2
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQ-NGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE++S   H +++ L G C  P    LVY Y+ NGS+   +  +   +P L W  R +I    A GLA+LH+     I+HRD
Sbjct:  334 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRD 416          

HSP 2 Score: 37.7354 bits (86), Expect = 9.950e-11
Identity = 15/38 (39.47%), Postives = 27/38 (71.05%), Query Frame = 3
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T + GT+ ++ PEY  TG    K+D++ +GV++L+L+T
Sbjct:  450 TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 487          
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
CRK21_ARATH2.075e-1131.71Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK32_ARATH2.077e-1132.22Putative cysteine-rich receptor-like protein kinas... [more]
YR818_MIMIV3.276e-1139.36Putative serine/threonine-protein kinase/receptor ... [more]
Y2239_ARATH3.503e-1135.37Probable LRR receptor-like serine/threonine-protei... [more]
Y5838_ARATH3.506e-1135.29Probably inactive leucine-rich repeat receptor-lik... [more]
SERK5_ARATH3.509e-1137.35Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
CRK30_ARATH7.637e-1131.76Putative cysteine-rich receptor-like protein kinas... [more]
SRF5_ARATH7.638e-1136.25Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
BAK1_ARATH9.950e-1136.14BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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