CF835710

Overview
NameCF835710
Unique NameCF835710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.092e-18
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE+L+Q RH H+V L+G C E +   +VYEY+E G+L+D++Y  + KP L W  R +I    A GL +LH    + I+HRD
Sbjct:  531 EVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRD 612

HSP 2 Score: 38.1206 bits (87), Expect = 1.092e-18
Identity = 15/37 (40.54%), Postives = 26/37 (70.27%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            T + G+  Y+DPEY     +  KSD+Y+FGV++L+++
Sbjct:  647 TAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVV 683
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.416e-18
Identity = 37/104 (35.58%), Postives = 55/104 (52.88%), Query Frame = 2 
Query:   80 KFPSNL-----QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRDHS 370
            ++P NL     ++E +  IRH ++V L G    P  N L Y+Y+ENGSL D ++    K  L W  R +I    A GLA+LH+     I+HRD +   +  D +
Sbjct:  681 QYPHNLREFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDEN 784

HSP 2 Score: 51.9878 bits (123), Expect = 1.416e-18
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 3 
Query:  354 YRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            +  T + GT+ Y+DPEY RT  I  KSD+Y+FG+++L+LLT
Sbjct:  804 HASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLT 844
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.418e-18
Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQN--GKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E+LS++RH H+V L+G C + N   LVYEY+ +G+L+D+++ ++    P L W  R +I    A GL +LH      I+HRD
Sbjct:  570 ELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRD 653

HSP 2 Score: 47.3654 bits (111), Expect = 1.418e-18
Identity = 20/42 (47.62%), Postives = 31/42 (73.81%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T++ GT  Y+DPEY+R   +  KSD+Y+FGV++L++L  C P
Sbjct:  689 TVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVL-CCRP 729
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.844e-18
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPEIN--CLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +VE+L ++ H ++V L+G C E     L+YEY+ NG L+ ++  ++G   L W  R +I+ + A GL +LH     P+VHRD
Sbjct:  621 EVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHGGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRD 702

HSP 2 Score: 49.2914 bits (116), Expect = 1.844e-18
Identity = 17/39 (43.59%), Postives = 33/39 (84.62%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            T++AGT  Y+DPEY++T  +  KSD+Y+FG+++L+++++
Sbjct:  737 TVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISN 775
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.848e-18
Identity = 33/92 (35.87%), Postives = 57/92 (61.96%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACPE--INCLVYEYLENGSLEDYIYHQNGKPALP-WFVRFQIIFEVACGLAFLHNSKPKPIVHRD*QHHRVQRD 364
            +V +LSQI H ++V LLG C E  +  LVYE++ NG+L ++++ +  +  +  W +R +I  ++A  L++LH+S   PI HRD +   +  D
Sbjct:  491 EVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLD 582

HSP 2 Score: 48.521 bits (114), Expect = 1.848e-18
Identity = 18/38 (47.37%), Postives = 31/38 (81.58%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLT 476
            T+++GT+ YMDPEY ++     KSD+Y+FGV++++L+T
Sbjct:  607 TVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELIT 644
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.851e-18
Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++ +LSQI H ++V LLG C   E+  LVYEY+ NG L   ++ ++    + W VR +I  E+A  L ++H++   PI HRD
Sbjct:  473 EIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRD 554

HSP 2 Score: 47.3654 bits (111), Expect = 1.851e-18
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T++AGT  YMDPEY  +     KSD+Y+FGV++++L+T   P
Sbjct:  588 TLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKP 629
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.855e-18
Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACP--EINCLVYEYLENGSLEDYIYHQNGKPALP--WFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V +L Q+ H  +V LLG C   E+  L+YE++ NG+L ++++  + +   P  W  R QI ++ A GLA+LH++   PI HRD
Sbjct:  407 EVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRD 490

HSP 2 Score: 50.0618 bits (118), Expect = 1.855e-18
Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 3 
Query:  333 ETDNITEYRETILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTS 479
            ET N   +  T   GTL Y+DPEY+R   +  KSD+Y+FGV++L+++TS
Sbjct:  519 ETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTS 567
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.383e-18
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGACP--EINCLVYEYLENGSLEDYIYHQNGK-PALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++E L +++HP++V LLG C   E   LVYEY+ NGSL+ ++ +Q G    L W  R +I    A GLAFLH+     I+HRD
Sbjct:  961 EMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRD 1043

HSP 2 Score: 46.9802 bits (110), Expect = 2.383e-18
Identity = 20/44 (45.45%), Postives = 30/44 (68.18%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLPNG 494
            T++AGT  Y+ PEY ++     K D+Y+FGVI+L+L+T   P G
Sbjct: 1077 TVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTG 1120
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 2.396e-18
Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKP-ALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            +V +LSQIRH ++V   G C  P+   LVYEYL  GSL D++Y    K  +L W  R ++  + A GL +LHN     I+HRD
Sbjct:  650 EVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRD 732

HSP 2 Score: 46.2098 bits (108), Expect = 2.396e-18
Identity = 18/37 (48.65%), Postives = 29/37 (78.38%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLL 473
            T++ GT  Y+DPEY+ T  +  KSD+Y+FGV++L+L+
Sbjct:  767 TVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELI 803
[Close]
BLAST of CF835710 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 2.406e-18
Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = 2 
Query:   98 QVEVLSQIRHPHVVLLLGAC--PEINCLVYEYLENGSLEDYIYHQNGKPALPWFVRFQIIFEVACGLAFLHNSKPKPIVHRD 337
            ++ +LSQI H ++V L+G C   E+  LVYEY+ NG +   ++ ++   A+ W VR +I  E+A  L ++H++   PI HRD
Sbjct:  476 EIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRD 557

HSP 2 Score: 47.3654 bits (111), Expect = 2.406e-18
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 3 
Query:  363 TILAGTLHYMDPEYHRTGTIRPKSDLYAFGVIILQLLTSCLP 488
            T++AGT  YMDPEY  +     KSD+Y+FGV++++L+T   P
Sbjct:  591 TMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKP 632
The following BLAST results are available for this feature:
BLAST of CF835710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
Y2393_ARATH1.092e-1843.90Probable receptor-like protein kinase At2g39360 OS... [more]
ERL1_ARATH1.416e-1835.58LRR receptor-like serine/threonine-protein kinase ... [more]
Y5389_ARATH1.418e-1839.29Probable receptor-like protein kinase At5g38990 OS... [more]
Y2899_ARATH1.844e-1837.80Probable leucine-rich repeat receptor-like protein... [more]
WAKLH_ARATH1.848e-1835.87Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
WAKLA_ARATH1.851e-1839.02Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAKLQ_ARATH1.855e-1838.10Wall-associated receptor kinase-like 20 OS=Arabido... [more]
EXS_ARATH2.383e-1843.37Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5487_ARATH2.396e-1843.37Probable LRR receptor-like serine/threonine-protei... [more]
WAKLE_ARATH2.406e-1837.80Wall-associated receptor kinase-like 5 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M02_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835710 ID=CF835710; Name=CF835710; organism=Citrus sinensis; type=EST; length=751bp
TTTTTTTTTTTTTTTTTAAAAAAAAATGAGGTGCCTTATAATTTGTGAAT
CCCAAGTTCATAGATATGATCTGCCTTAAAAATTTCCTTCCAATTTGCAG
GTTGAAGTTTTAAGCCAGATACGACATCCACACGTGGTTCTGCTGCTTGG
AGCCTGTCCTGAGATCAATTGTTTGGTCTATGAATACCTGGAAAATGGAA
GCCTGGAGGACTATATTTACCATCAGAATGGGAAGCCTGCTCTTCCTTGG
TTTGTTCGGTTCCAGATAATTTTTGAAGTAGCCTGTGGACTTGCATTCTT
ACACAACTCAAAGCCAAAGCCTATTGTGCATCGAGACTGACAACATCACA
GAGTACAGAGAGACCATTCTTGCTGGTACTCTTCATTACATGGACCCAGA
ATATCACAGAACCGGCACTATTCGTCCCAAATCTGATCTATATGCATTTG
GAGTTATTATACTCCAGTTATTGACATCTTGCCTTCCGAATGGAGTTCTA
CTGATCTTGATACCGAAGTCATGCCGGTTCTCAGGAAACTCAAGGATGTT
GCAGATGCTTGTGTAAAGTTGGAAAGCAGCAATGTTTATGCACCAAGCCA
CTTCTTCTGTCCAATCATTGCTGCTGATGGATTTACTTATGAGCATAGAG
CAATCAAGGCATGGCTTGAGAAACACAATGTATCTCCAGTGACAAAGCTT
AGGCTCCAGCATTTGTCAATTATTCCAAACTACACACTGCGTTCTGCCAT
T
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