CF835712

Overview
NameCF835712
Unique NameCF835712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:662..1498. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835712 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.758e-25
Identity = 60/191 (31.41%), Postives = 106/191 (55.50%), Query Frame = -3
Query:  263 LGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 826
            LG  F+D+L  +  +N  FN+ M   +  +   + +    F  +  +VDV              +P +K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + E  D  + ++   ++D    +   +G+ER ++E+  L IEAGF+
Sbjct:  146 LGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVINEKKDENQVTQIKLLMDV--NMACLNGKERNEEEWKKLFIEAGFQ 334          
BLAST of CF835712 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.060e-24
Identity = 59/191 (30.89%), Postives = 106/191 (55.50%), Query Frame = -3
Query:  263 LGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 826
            LG  F+D+L  +  +N  FN+ M   +  +   + +    F  +  +VDV              +P +K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + +  D  + ++   ++D    +   +G+ER ++E+  L IEAGF+
Sbjct:  146 LGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDV--NMACLNGKERNEEEWKKLFIEAGFQ 334          
BLAST of CF835712 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.410e-23
Identity = 58/190 (30.53%), Postives = 104/190 (54.74%), Query Frame = -3
Query:  266 GMDFYDYLGTDSRFNEVFNNGMIGQTSFVIN-KIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALP---NDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGF 823
            G   ++    D+ F+ + N+G+   +  +++  I +S + FQ I+ LVDV              +PH+K    D+ HV+  A ++  ++ + GDM++ IP  DA+L+K +LH++D ++C+KIL+NC KA+P     GKV++IN  +   P   +      I D    I   +G ER ++E++ +  EAG+
Sbjct:  158 GRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGAAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDV--YIMFINGMERDEQEWSKIFSEAGY 345          
BLAST of CF835712 vs. ExPASy Swiss-Prot
Match: OMT12_DICDI (O-methyltransferase 12 OS=Dictyostelium discoideum GN=omt12 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.924e-22
Identity = 55/190 (28.95%), Postives = 104/190 (54.74%), Query Frame = -3
Query:  263 FYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASS------YPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 814
            F+++  TD  + ++F+N M   TS +I++++       N   +VD+           +   P+I GINFD+ ++I  ++S      +P ++HV GD +  +PE D  ++K++LH++ DE CI IL N +K+L  +GK+ + +  L    D +  ++++   D I ++Q    +ER+  E+  L  + GFK
Sbjct:  135 FWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVL----DPSNYTKEAVFKD-ILMMQYFDAKERSINEWHQLFEKCGFK 319          
BLAST of CF835712 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.287e-19
Identity = 58/190 (30.53%), Postives = 91/190 (47.89%), Query Frame = -3
Query:  263 ALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 829
            A G  F++ L  +      F+  M   +  + +   + YK   + I  LVDV           +   P IK    D+PHV+    S   + ++GGDM+Q IP  DAIL+K ++H++DD   +KIL+ C  A+   GKV++I+  +    D  E   D    D   +    + +ERT  E+  L  +AGFK
Sbjct:  151 ANGCTFWEKLANEPSKGRFFDEAMSCDSRLIAHVFTKDYKHVIEGIRTLVDVGGGNGTMAKAIVEAMPTIKCTVIDLPHVVAGLESTDNLNYIGGDMFQSIPSADAILLKSIIHDWDDVEGLKILKKCKDAVVMGGKVIIIDVVVGVNHDIDEVLEDQLHFDMAMMCYF-NAKERTMSEWEKLIYDAGFK 339          
BLAST of CF835712 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.987e-19
Identity = 61/188 (32.45%), Postives = 98/188 (52.13%), Query Frame = -3
Query:  266 YDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG---FQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPN-DGKVLVINSTL--PEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGF 811
            Y+    D   NE+ N+ M   ++F++  +V           +  +VDV           +  +PH+K    D+ HVI+     P +++V GDM+  IP  DAIL+K  LHN++D++CIKIL    +ALP+  GKV+++   +    +P  T A R S  +D + +     G+ERTKKE+  L  +A F
Sbjct:  150 YEKTEGDPEINEILNDAMTSHSTFMLPALVSGLMKENVLDGVASIVDVGGNSGVVAKGIVDAFPHVKCSVMDLNHVIERVIKNPKLDYVAGDMFTSIPNADAILLKSTLHNYEDDDCIKILNIAKEALPSTGGKVILVEIVVDTENLPLFTSA-RLSMGMDMMLM----SGKERTKKEWEDLLRKANF 332          
BLAST of CF835712 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.654e-19
Identity = 58/189 (30.69%), Postives = 92/189 (48.68%), Query Frame = -3
Query:  266 ALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGF 829
            A G  F++ L         F+  M   +  V + + + YK     I  LVDV           +   P +K    D+PHV+    S   + ++GGDM+Q IP  DAIL+K+++H++DDE  +KIL+ C  A+   GKV++I+  +    D  E   D    D + ++   + +ERT  E+  L   AGF
Sbjct:  150 ANGCTFWEKLANKPSMGRFFDEAMSCDSRLVAHVLTKDYKHVIDGIRTLVDVGGGNGTMAKAIVEAVPTMKCTVLDLPHVVAGLESTDKLSYIGGDMFQSIPSADAILLKFIIHDWDDEEGLKILKRCKDAVGIGGKVIIIDVVVGVNHDVDEVLEDQLHFD-MAMMSYFNAKERTMNEWEKLISAAGF 337          
BLAST of CF835712 vs. ExPASy Swiss-Prot
Match: OMT11_DICDI (Probable inactive O-methyltransferase 11 OS=Dictyostelium discoideum GN=omt11 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.691e-19
Identity = 54/202 (26.73%), Postives = 106/202 (52.48%), Query Frame = -3
Query:  221 DFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASS---YPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVM 817
            D+++ +  +  +   FN+GMIG T+ ++ K ++          +VD+           + +YP++ GINFD   VI  ++    +P ++HV GD ++ +PE D  LMK +L  F DE C ++L+   K++ ++ K+++++  L    DS++       LD I +++   G++R+  E+  L   +GFK   +E    N  ++
Sbjct:  133 DYWEQIEKNEIYKNEFNDGMIGYTTHIL-KFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIIL----DSSKYLNFDTYLD-ILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLII 328          
BLAST of CF835712 vs. ExPASy Swiss-Prot
Match: OMT4_DICDI (O-methyltransferase 4 OS=Dictyostelium discoideum GN=omt4 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.994e-16
Identity = 54/194 (27.84%), Postives = 97/194 (50.00%), Query Frame = -3
Query:  263 NKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSY---PGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 835
            +K+LG++ +  L       E F N M   +S  I   ++ +  F    ++VD+           + KYP+  GINFD+      A      P +EH  G+ ++ +PEGD  ++K +LH++ DE+CIKIL    K++   GKV++ +  +    +    ++    LD + +       E+T K+F+ ++ +AGFK
Sbjct:  132 HKSLGVNSWWDLIKKPGEEEFFKNAMKVSSSEAIESALK-FIDFSPFKKIVDIGGSHGRFVCEILEKYPNSHGINFDLESFFNGAGELIKNPRLEHKSGNFFESVPEGDCYILKRILHDWKDEDCIKILETIGKSILPGGKVIIFDCII----NPKNYNKGHLYLD-VMMFHFFGSEEKTIKQFSNISDKAGFK 319          
BLAST of CF835712 vs. ExPASy Swiss-Prot
Match: OMT7_DICDI (O-methyltransferase 7 OS=Dictyostelium discoideum GN=omt7 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.617e-15
Identity = 50/188 (26.60%), Postives = 96/188 (51.06%), Query Frame = -3
Query:  263 DFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASS---YPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 817
            DF+D + T+  F   FN  M   ++  I  I+++   F +   +VDV           + KY ++ GI FD+  VI  +     +P +E+V G  ++ +P  D  ++K +LH++DDE C++IL+   K++  + K+ + +    E+ D  +  + S  LD + +    + RER+  ++  L  ++ FK
Sbjct:  140 DFWDIVKTNEHFKYSFNQEMREFSNLSIPTIIKN-TDFSSFNTVVDVGGSHGRIVGELVKKYENLNGIVFDLETVINSSIEKIKHPRIEYVSGSFFESVPSADCYVLKNILHDWDDEKCLEILKTISKSMKENSKIFIFD----EIIDPNDYRKLSLFLD-VTVFHFFNSRERSLNDWKQLCDKSDFK 321          
The following BLAST results are available for this feature:
BLAST of CF835712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
7OMT9_MEDSA4.758e-2531.41Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]
7OMT8_MEDSA1.060e-2430.89Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
ZRP4_MAIZE3.410e-2330.53O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
OMT12_DICDI4.924e-2228.95O-methyltransferase 12 OS=Dictyostelium discoideum... [more]
EOMT1_OCIBA2.287e-1930.53Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
COOMT_COPJA2.987e-1932.45Columbamine O-methyltransferase OS=Coptis japonica... [more]
CVMT1_OCIBA6.654e-1930.69Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
OMT11_DICDI8.691e-1926.73Probable inactive O-methyltransferase 11 OS=Dictyo... [more]
OMT4_DICDI8.994e-1627.84O-methyltransferase 4 OS=Dictyostelium discoideum ... [more]
OMT7_DICDI2.617e-1526.60O-methyltransferase 7 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835712 ID=CF835712; Name=CF835712; organism=Citrus sinensis; type=EST; length=837bp
TTTTTTTTTTTTTTTTTATACCAAACACAAACAGGACTTATATTACTGAA
CACACAAAAGCATTACATAAGAAGTTCCCGCGAGCCATAAAGGCCAAACA
AAACAGAAAGTTACAGAAAAGAAAATGGAGTATCGACACTCCAAATTAAA
ATTGAGAAGATGCATCTTTCTGATAAAGAAAGAATGAAGCAATCTAGCTT
CAAAGTTACTTGTAGAATTCCATGACATAGGAATTGCAAACGTTACATTC
AAAGTTGATACCCTTAAATCCAGCTTCGATTGCCAATGCAGTGAACTCCT
TTTTGGTCCGCTCCCTTCCATGAGGAATTTGGATTAAAAAAATTGCATCT
AAAATGAAGGAATCCCTTGAAGCCTCGGTACTGTCAGGCACTTCTGGCAA
CGTTGAGTTAATAACAAGTACCTTTCCATCATTTGGAAGAGCTTTGTAAC
AATTCCTCAGTATCTTTATGCAATTCTCATCATCAAAATTATGAAGCATC
CACTTCATTAAAATGGCATCCCCCTCTGGAATTTTTTGGTACATATCTCC
GCCAACATGTTCCATGCCGGGATAAGATGAGGCATCTTTTATAACATGAG
GTACGTCAAAATTAATACCCTTAATATGAGGGTATTTGGAAATTATGGTC
GCAAGGGTGATTCCTAAACCACCGCCAACGTCAACAAGGCGCGTAATATT
CTGAAAGCCTTTGTAGGATTCTACAATCTTATTGATTACAAAAGAAGTCT
GGCCGATCATTCCATTGTTGAAAACTTCATTGAACCTGGAGTCGGTGCCC
AGATAATCGTAGAAATCCATTCCGAGGGCTTTATTAT
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