CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_COXB1 (60 kDa chaperonin OS=Coxiella burnetii (strain CbuK_Q154) GN=groL PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.153e-21 Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = -1 Query: 370 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGGNPMANSG 705 ++N++++VG +I +RA+ YPL I KN GV +VV++KVL+ + YG NAATG Y D++ GI+DP KV R L++A+S A + ++C E K+ E +MPGG M G Sbjct: 431 VENEDQRVGVEIARRAMAYPLSQIVKNTGVQAAVVADKVLNHKDVNYGYNAATGEYGDMIEMGILDPTKVTRTALQNAASIAGLMITTECMVTEAPKKKEESMPGGGDMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_MAGSM (60 kDa chaperonin OS=Magnetococcus sp. (strain MC-1) GN=groL PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20 Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 N +++VG +IV RAL PL++IA N G GSVV +V+ +G NAATG YEDL+A+G+IDP KVVR L+ A+S A + ++ E+ + EPAMPGG+ G G Sbjct: 434 NHDQQVGINIVTRALEEPLRIIASNAGAEGSVVVNRVVETKETNFGFNAATGVYEDLVASGVIDPAKVVRHALQAAASVAGLMITTEAMVAELPKDEPAMPGGDMGGMGGMG 545
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_SYNP6 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL2 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20 Identity = 54/108 (50.00%), Postives = 70/108 (64.81%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 +EK+G +IV RAL PL+ IA N G GSVV EK+ + + +G NA TG YEDL+A+GI+DP KVVR L+ A+S A L ++ V+ EPEPAMP G M G Sbjct: 436 DEKLGVEIVARALEAPLRQIADNAGAEGSVVVEKLRDK-DFNFGYNALTGQYEDLVASGILDPAKVVRSALQDAASVASLILTTEVLVVDQPEPEPAMPAGGDMGGMG 542
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_HYPNA (60 kDa chaperonin OS=Hyphomonas neptunium (strain ATCC 15444) GN=groL PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.726e-19 Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 699 ND+EK G DIV++AL P++ IA+N GV GSVV +L+ + YG NA T Y DL+A G+IDP KVVR L++A+S A + ++ G E + E A GG P G G Sbjct: 432 NDDEKAGIDIVRKALEAPIRQIAENAGVEGSVVVNTILNNKSRSYGFNAQTEEYGDLVAMGVIDPVKVVRSALQNAASIASLLITTEAGIAEAPKKESAGGGGMPGGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_GLUDA (60 kDa chaperonin 1 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19 Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = -1 Query: 370 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE-PAMPGGNPMANSG 699 ND+++VGA+I+++AL PL+ IA N G +G+V++ KVL ++ YG +A G+Y+DL+AAGIIDP KVVR L+ ASS A + ++ E E + PAMP G M G Sbjct: 433 NDDQRVGAEIIRKALQAPLRQIAHNAGEDGAVIAGKVLESNDYNYGFDAQIGDYKDLVAAGIIDPTKVVRTALQDASSVAGLLITTEAMVAEKPEKKAPAMPAGGGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_RHORT (60 kDa chaperonin 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.846e-19 Identity = 48/111 (43.24%), Postives = 74/111 (66.67%), Query Frame = -1 Query: 367 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGY 699 N ++KVG +IV+RAL P++ IA+N GV+G+VV+ K+L ++ +G NA TG YE+L+ G+IDP KVVR L+ A+S A + ++ EI E +PA+P G M + + Sbjct: 433 NADQKVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLESSDADFGYNAQTGVYENLVKVGVIDPTKVVRTALQGAASVASLLITTEAMVAEIPEKKPALPAGGGMGDMDF 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_ANASL (60 kDa chaperonin 2 OS=Anabaena sp. (strain L31) GN=groL2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19 Identity = 55/109 (50.46%), Postives = 71/109 (65.14%), Query Frame = -1 Query: 370 DEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 696 +EEK+GADIVKRAL PL+ IA N G GSV+ +V ++ G NAATG +EDL+AAGIIDP KVVR L++A+S A L ++ VE E +PA+P M G Sbjct: 433 EEEKIGADIVKRALEAPLRQIADNAGEEGSVIVSRVKD-SDFNVGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKKPAVPADPGMGGMG 540
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_SYNS9 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9902) GN=groL1 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.560e-19 Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = -1 Query: 361 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 693 EE +GA+IV AL PL IA+N G NG+VV+E V SR+N++ G NAA G+Y D++AAGI+DP KV R L++A+S A L ++C ++ E + A P G M + Y Sbjct: 435 EELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRSNNE-GYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGGGMGGGDFDY 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_SOLUE (60 kDa chaperonin OS=Solibacter usitatus (strain Ellin6076) GN=groL PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19 Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = -1 Query: 391 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGG 693 +E++G IVKRA PL+ I N G G++V +KV AN+ YG NAAT YEDL+AAG+IDP KV R L+HA+S A L ++ EI E + A GG Sbjct: 432 DEQIGVSIVKRACEEPLRQIVSNSGTEGAIVVDKVRENANNNYGYNAATDTYEDLVAAGVIDPTKVTRSALQHAASIAGLMLTTEAMIAEIPEKKSAPAGG 532
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19 Identity = 59/124 (47.58%), Postives = 73/124 (58.87%), Query Frame = -1 Query: 334 LDNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY*AN*QGPGG 705 L+N+EEK+GADIV+RAL PL IA N GV GSV+ EKV S + G N TG YEDL+AAGI+DP VVR L++A S A L ++ VE +P G P + G G G GG Sbjct: 431 LNNEEEKIGADIVRRALEAPLNQIANNSGVEGSVIVEKVRS-TDFSVGYNVITGEYEDLIAAGILDPAMVVRSALQNAGSIAGMVLTTEAVVVE----KPEKKGAAPDMDGGMGGMGGMGGMGG 549 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |