CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_ROSDO (60 kDa chaperonin 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=groL2 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16 Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = -1 Query: 364 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 702 DN+++ VG IV++AL PL+ IA+N GV+GSVV+ K+ + K+G NA T Y D+ A G+IDP KVVR L+ A+S A + ++ + E A PGG G G Sbjct: 432 DNNDQNVGISIVRKALEAPLRQIAENAGVDGSVVAGKIRESDDLKFGFNAQTEEYGDMFAFGVIDPAKVVRTALQDAASIAGLLITTEAMVADRPAKEGAAPGGGMPDMGGMG 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_CORDI (60 kDa chaperonin 2 OS=Corynebacterium diphtheriae GN=groL2 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16 Identity = 52/110 (47.27%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 367 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEP-EPAMPGGNPMANSGY 693 +E G IV+ AL PLK IA N G+ VV++KV S G NAATG Y DLMAAGI DP KV R L++A+S A FL ++ + EP PAMPG + M G+ Sbjct: 438 DEATGVKIVREALSAPLKQIALNAGLEAGVVADKV-SHLPAGEGLNAATGEYVDLMAAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEPAAPAMPGADEMGGMGF 546
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_SPHAL (60 kDa chaperonin 1 OS=Sphingopyxis alaskensis GN=groL1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16 Identity = 45/104 (43.27%), Postives = 68/104 (65.38%), Query Frame = -1 Query: 388 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGN 699 ND++ G DI+++A+ PL+ IA N G +G+VV+ +L + + G NAAT YE+L AAG+IDP KVVR L+ A+S A + ++ E+ E +PAMP G+ Sbjct: 433 NDDQTRGIDIIRKAIETPLRQIAANAGHDGAVVAGNLLRVGDVEQGFNAATDVYENLKAAGVIDPTKVVRTALQDAASVAGLLITTEAAVSELPEDKPAMPMGS 536
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16 Identity = 52/109 (47.71%), Postives = 66/109 (60.55%), Query Frame = -1 Query: 370 DEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 696 DEEKVGAD+V AL PL IA N G G+VV EKV A+ YG NA T YED++AAG++DP KVVR L++A S A L ++ + + +PEPA M G Sbjct: 433 DEEKVGADLVGIALEAPLTQIADNAGKEGAVVVEKVRD-ADFSYGYNAMTDTYEDMIAAGVVDPAKVVRSGLQNAGSIAGMVLTTE--ALVVDKPEPAGAAAPDMGGMG 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_SULNB (60 kDa chaperonin OS=Sulfurovum sp. (strain NBC37-1) GN=groL PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16 Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = -1 Query: 385 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKE---PEPAMP--GGNP 693 +E VGA+I+ RA+ P+K IA+N G + VV++K+ + + G NAATG Y +++ AGIIDP KV R L++A+S A L ++ +IKE P P MP GG P Sbjct: 432 DEAVGAEIILRAVYAPMKQIAQNAGFDAGVVADKIANNSEANLGFNAATGEYVNMLEAGIIDPLKVARVALQNATSVASLLLTTEATVSDIKEAPTPAPTMPDMGGMP 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_PROVI (60 kDa chaperonin OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=groL PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16 Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = -1 Query: 364 DNDEEKVGADIVKRALCYPLKLIAKNPGV-NGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 702 DND++K G +I++RAL PL+ I N G +G+VV E V YG NA T YE+L+ AG++DP KV R LE+A+S A L ++ +IKE P MP P G G Sbjct: 432 DNDDQKTGIEIIRRALEEPLRQIVANTGTTDGAVVLEHV-KNGEGDYGFNARTEQYENLVEAGVVDPTKVTRSALENAASVASILLTTEACITDIKENTPDMPAMPPGGMGGMG 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_DESVM (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groL PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 47/114 (41.23%), Postives = 67/114 (58.77%), Query Frame = -1 Query: 364 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKE--PEPAMPGGNPMANSGYG 699 +D+E G +I++RA+ PL+ I+ N G GS+V EKV +G NAA+G +EDL+ AG+IDP KV R L++A+S A L ++C E E + MPGG G G Sbjct: 433 DDDEAAGVNIIRRAIEEPLRQISSNAGYEGSIVVEKVRD-GKDGFGFNAASGEFEDLIKAGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEAKKDMPMPGGGMGGMGGMG 545
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CHLTE (60 kDa chaperonin OS=Chlorobium tepidum GN=groL PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = -1 Query: 391 DNDEEKVGADIVKRALCYPLKLIAKNPGV-NGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGG 702 DN+++K G +I++RAL PL+ I N G +G+VV EKV A YG NA T YE+L+ AG++DP KV R LE+A+S A L ++ ++KE + PAMP G Sbjct: 432 DNEDQKTGIEIIRRALEEPLRQIVANTGTTDGAVVLEKV-KNAEGDYGFNARTEQYENLIEAGVVDPTKVTRSALENAASVASILLTTEAAITDVKEDKADMPAMPPG 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CHLL2 (60 kDa chaperonin OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=groL PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 48/114 (42.11%), Postives = 69/114 (60.53%), Query Frame = -1 Query: 364 DNDEEKVGADIVKRALCYPLKLIAKNPGV-NGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYG 702 DN+++K G +I++RAL PL+ I N G +G+VV EKV + A +G NA T YE+L+ AG++DP KV R LE+A+S A L ++ +IKE + MP P G G Sbjct: 432 DNEDQKTGIEIIRRALEEPLRQIVANTGTTDGAVVLEKVKA-AEGDFGFNARTEQYENLVEAGVVDPTKVTRSALENAASVASILLTTEAAITDIKEEKSDMPAMPPGGMGGMG 544
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH603_BRAJA (60 kDa chaperonin 3 OS=Bradyrhizobium japonicum GN=groL3 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 44/115 (38.26%), Postives = 69/115 (60.00%), Query Frame = -1 Query: 367 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPE---PAMPGGNPMANSGY 702 +ND++K G +IV++AL +P + IA N G +GS+V KVL + +G +A TG Y +L++ GIIDP KVVR +++ASS A + ++ E+ + PAMP M + Sbjct: 432 ENDDQKTGVEIVRKALSWPARQIAINAGEDGSIVVGKVLDNEQYSFGFDAQTGEYSNLVSKGIIDPAKVVRIAVQNASSVAGLLITTEAMVAELPKKATAGPAMPAAPGMGGMDF 546 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |