CF835718
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_NOCSJ (60 kDa chaperonin 2 OS=Nocardioides sp. (strain BAA-499 / JS614) GN=groL2 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 53/109 (48.62%), Postives = 67/109 (61.47%), Query Frame = -1 Query: 370 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLS-RANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSG 693 +E VGA IV+ A PLK IA N G+ G VV+EKV A H G NAATG Y D++A+GIIDP KV R L++A+S A FL ++ V +PE A P G+P G Sbjct: 433 DEAVGAQIVRFATDAPLKQIAINAGLEGGVVAEKVRGLTAGH--GLNAATGEYVDMIASGIIDPAKVTRSALQNAASIAALFLTTE--AVVADKPEKAAPMGDPSGGMG 537
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_COREF (60 kDa chaperonin 2 OS=Corynebacterium efficiens GN=groL2 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 57/120 (47.50%), Postives = 70/120 (58.33%), Query Frame = -1 Query: 370 LDND-----EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEP---AMPGGNPMANSG 705 LDND +E G IV+ AL PLK IA N G+ VV++KV SR G NAATG Y DLMAAGI DP KV R L++A+S A FL ++ V +P+P AMPG + M G Sbjct: 429 LDNDLDLTGDEATGVRIVRDALTAPLKQIAANAGLEPGVVADKV-SRLPEGEGLNAATGEYVDLMAAGINDPVKVTRSALQNAASIAALFLTTE--AVVADKPQPAGAAMPGADEMGGMG 545
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = -1 Query: 367 DEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGY 696 DEE GA IV RAL PLK IA+N G NG+V+SE+V + G NAA+ Y D++AAGI+DP KV R L++A+S A L ++C V+ E E A P G P + Y Sbjct: 434 DEELTGALIVARALPAPLKRIAENAGQNGAVISERVKEK-EFNVGYNAASLEYVDMLAAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEKEKA-PAGAPGGDFDY 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH601_RHOPA (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris GN=groL1 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI-KEPEPAMPGGNPMANSG 702 DN + + G +IV +AL P++ IA+N GV GS+V K+L +G +A T Y D++A GI+DP KVVR L+ ASS A + ++ E+ K PAMP G M G Sbjct: 432 DNPDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKTETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDASSVASLLVTTEAMVAELPKADAPAMPAGGGMGGMG 543
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_SCAIO (60 kDa chaperonin OS=Scardovia inopinata GN=groL PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = -1 Query: 367 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGY 693 +E GA IV RA+ PLK IA+N G +G VV +KV + G NAATG YEDL++AG+ DP KV R L++A+S A FL ++ V +PEP P P + GY Sbjct: 433 DEATGAGIVFRAIEAPLKQIAQNAGFSGEVVIDKVRTLPAGS-GLNAATGEYEDLLSAGVTDPVKVTRSALQNAASIAGLFLTTE--AVVANKPEPPAPAAAPNPDMGY 538
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_NOVAD (60 kDa chaperonin OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=groL PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = -1 Query: 397 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 699 ND++ G DIV+RA+ P++ IA N G +G+VVS +L + G NAAT YE+L AAG+IDP KVVR L+ A+S + + ++ E + +PAMP Sbjct: 433 NDDQTKGIDIVRRAIQAPIRQIAANAGHDGAVVSGNLLRENDENQGFNAATDTYENLKAAGVIDPTKVVRTALQDAASVSGLLITTEAAISEKPDDKPAMP 533
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_HYDS0 (60 kDa chaperonin OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=groL PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = -1 Query: 397 NDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMP 699 N + ++G IV A YPLK IA N G GS+V EKV + YG +AA G Y+D++ AGIIDP KVVR L++A+S A T L ++ E+ E + P Sbjct: 433 NKDRELGVKIVYNACKYPLKQIAYNAGYEGSLVLEKVYEDQDKNYGFDAANGEYKDMVKAGIIDPTKVVRTALQNAASAAGTMLTAEALIAELPEKKEKTP 533
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_FLAPJ (60 kDa chaperonin OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=groL PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = -1 Query: 385 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPA---MPGGNP 702 DN +E G IV RA+ PL+ I +N G+ GSVV KV + + +G NA T Y D++ AGIIDP KV R LE+A+S A L ++C VEIKE M GG P Sbjct: 432 DNADEATGIQIVSRAVEAPLRTIVENAGLEGSVVVAKV-AEGSGDFGYNAKTDEYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALVEIKEENAGGGQMGGGMP 539
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH60_CLONN (60 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groL PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = -1 Query: 370 DNDEEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEI--KEPEPAMPGGNPMANSG 702 DN E ++G I++RAL P++ IA N G+ GSV+ +K+ + G +A G Y ++M GI+DP KV R L++A+S A TFL ++C EI K P PA PG M G Sbjct: 430 DNAEVRLGIAIIRRALEEPVRQIAANAGLEGSVIIDKI-KNSEDGIGFDALEGEYTNMMQKGIVDPAKVTRSALQNAASVASTFLTTECVVAEIPEKNPMPAAPGMGGMGMDG 541
BLAST of CF835718 vs. ExPASy Swiss-Prot
Match: CH602_PROM5 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9515) GN=groL2 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 46/111 (41.44%), Postives = 69/111 (62.16%), Query Frame = -1 Query: 361 EEKVGADIVKRALCYPLKLIAKNPGVNGSVVSEKVLSRANHKYGSNAATGNYEDLMAAGIIDPPKVVRCCLEHASSGAKTFLMSDCGGVEIKEPEPAMPGGNPMANSGYGY 693 EE +GA+IV+ +L PL IA+N G NG+V++E V S+ + G NAATG Y D+ +AGI+DP KV R L++A+S A L ++C ++ E + + P G P + Y Sbjct: 435 EELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKSKPFND-GFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADMPEKKESAPAGAPGMGGDFDY 544 The following BLAST results are available for this feature:
BLAST of CF835718 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835718 ID=CF835718; Name=CF835718; organism=Citrus sinensis; type=EST; length=705bpback to top |